Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g03062 ATGAACATGTTAGGCCTCAGAGACCTAGTTTTCATAGCACCAACCCATTCCCTTCACCATCATCACCAACAAGGCCAAACCATAATCTCACAAGACCACCACCATAGCCATGGCCATACCAACAACAACAACAACGACAATAACAATAACAATAACAATAACCTTCCTTTTCCTCCATCATCACTCAGCGTTGGCCTTGGAATCTTCCCCCTCATAACCGCCACACCCTGCATGCCACAAGATAACAATAACAACGTTCACCATGACCAACAACACCTTCTTGTTGGGACCAACACCACCACCACCACCACCGCCAATAACAGTTACTGGAACCTCAAGATGTGTCCTGAAGTTTCAGAACACGACGGCGGCGGTGGCGATGGAAACAACAACGGAGACGGTGGTGGTGGTAGTATCTACGGCCCTGAATTCAGGGTGTGCCAGGATTGTGGCAACAGGGCAAAGAAAGATTGCAGTTACAAGAGGTGCAGGACTTGTTGCAAGGGGCGTGGATATGATTGCAGCACTCACGTGAAGAGCACGTGGGTCCCCGTGTCGCATCGCCGGGCACGTGATATGGCCGTTGTTGCTGCCAGTGATGGTGGTGGTGCTGCTGCTCTTGGGGCTAATAAGAGGCTTAGAGCTTTTGGGTCATCACAAACAACTACAACTACTAATACCTCTCATAGTTCAACTTCTAATGCTACCACAACTAAGAATGCTGAATTTAAACAATCTTTACCGAGCCACGTTCGAGCCCCGGCGGCGTTTAGGTGCCACAGAGTGTCTGCTATTGGCAATGGCGAAGATGAAATTACATACTTGGCCACTGTCCACATTTGTGGCCATGTGTTCAAAGGGTTTCTTTATGATCAAGGTGCTGATGGCAAGAATGATGAAGTTCCTTGTGTTTCAGTGTTGCAACTTGGAAACAGTGGGAAGAACAACAACAATGGGGAATGTTCCTCTCCAACTCCAATTGGGGTTCCAATCAGTGCCTACCCTGCTTCTGCTTGCTGA 1020 0.4843 MNMLGLRDLVFIAPTHSLHHHHQQGQTIISQDHHHSHGHTNNNNNDNNNNNNNNLPFPPSSLSVGLGIFPLITATPCMPQDNNNNVHHDQQHLLVGTNTTTTTTANNSYWNLKMCPEVSEHDGGGGDGNNNGDGGGGSIYGPEFRVCQDCGNRAKKDCSYKRCRTCCKGRGYDCSTHVKSTWVPVSHRRARDMAVVAASDGGGAAALGANKRLRAFGSSQTTTTTNTSHSSTSNATTTKNAEFKQSLPSHVRAPAAFRCHRVSAIGNGEDEITYLATVHICGHVFKGFLYDQGADGKNDEVPCVSVLQLGNSGKNNNNGECSSPTPIGVPISAYPASAC 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g03062 339 MobiDBLite consensus disorder prediction 217 240 - -
Arst8g03062 339 NCBIfam putative zinc finger domain, LRP1 type 146 188 IPR006510 -
Arst8g03062 339 MobiDBLite consensus disorder prediction 17 58 - -
Arst8g03062 339 NCBIfam LRP1 C-terminal domain 247 293 IPR006511 -
Arst8g03062 339 Pfam Domain of unknown function (DUF702) 146 295 - -
Arst8g03062 339 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 26 318 IPR007818 GO:0003700|GO:0006355
Arst8g03062 339 MobiDBLite consensus disorder prediction 26 40 - -
Arst8g03062 339 MobiDBLite consensus disorder prediction 41 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g03062 Arst-Chr8 41748767 41753922 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g03062 1 324 C2H2 Transcription Factor Family AT5G12330 34.091 6.67e-49 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Arst8g03062 DUF702 3.4e-53 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g03062 - - adu:107462849 587.03