Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g03038 ATGTTGGTCGATTATGTTAATAAGCATGGAGAGGGAAACTGGAATGCTGTTCAGAAGTACTCAGGTCTATTACGTTGTGGAAAAAGTTGTCGATTGCGTTGGGCTAATCATCTGAGACCAAATTTAAAGAAAGGAGCATTTACTGCAGAAGAGGAGAGGTTGATTGCTGAACTTCACGCAAAAATGGGAAACAAATGGGCACGCATGGCAGCACATTTGCCTGGTCGCACAGATAATGAAATAAAGAACTACTGGAACACCCGTATCAAGAGGCGTCAACGTGCTGGCTTGCCACTTTATCCTCCTGAACTGTGCGTGCAAGCAGTGCAAGAGAATCAACATGGCCGAGGCTCTGGTGGTATTGATTGTGGCAATAATATGCATCATGATTTTGTTCACAAAAATTATGAGATTCACGGTGCAATATTTGACAGTTGGAATGGTAGTCAGGGAATCCTACCATATCCGCCTGAGCTTCCTGATATTTCTGCTTACACCGGTATGCTGAAAGGTTTTGACTCTTCCAAGTATTGTAAGTTTGAACAAATAACATCACCAAACCACAAGCGTCTCCGTGAGTCAACAACACCTTTTATTGGATCTGGTGGTATGAACACAAATTGGTTTTATCCATTTGATCAAATTCAGGATAACACGCCTGACAAGATTGCACAATCATTTGGCATGCAATCTCCCTTTGATCTCGGACCCTCTCCACACAGCTCCATTTGTTACAGTCATTCACTTTCGAATGGCAATTCCTCTACTTCTAAGCCGGCTTATGAGGCTGTGAAGTTTGAGCTCCCTTCACTCCAATATCCAGAAACTGATGTAGGTAGCTGGAGTACATCTCCACCACCTCCTTTACTTGAGTCAGTTGATGATTTCATTCAATCTCCTTTGCCAGTTAGTGCACTGGAGTCAGATTGTTCTTCCCCACAAAATAGTGGCCTGCTGGATGCTTTACTTTATCAGGCTAGGACTCTGAGCAATTCAAAGAACCATTATTCTGACAAGAGTTCAAATTCATCTACCGCAACTCCTTGTGACAGAGCGCTCAGCTCCACTCTGAACAAGTATGAGACAGACTGGGAAGACTACACTGACACTATATCACCATTCGGTGCAACTTCAATATTGAATGAGTGCACTGTTGCTAGTGCCAGTGCAAATTCATTGGATGAACACCCAACAGTTCGTTCCTTTAATGACAACATTGTGAAAACAGAGAATGTTGATCAGGTTTGGTCCCCGAACAGTGAAAATCAAGGCATGTCTGCGATCAAAATTACCCGGCCAGATGTTTTGCTTGCTTCGGATTGGCTTCAGCAGGGTTCGGGGCGTGACATGAGGCAAGGCAGCATGGCTGATGATATACCTGCCCTTCGCGAAGATGATTTAGCCACCGACTCCAAGCATACAAGGTCTGGAACTTCTCTGTTGAGTCAGGTATGTGGGTTTGGTTCTTGCGCAAGGAGCGTCATGCCTGCTTTCTGTCAAGGTTCCGATCGTGGTTAA 1518 0.444 MLVDYVNKHGEGNWNAVQKYSGLLRCGKSCRLRWANHLRPNLKKGAFTAEEERLIAELHAKMGNKWARMAAHLPGRTDNEIKNYWNTRIKRRQRAGLPLYPPELCVQAVQENQHGRGSGGIDCGNNMHHDFVHKNYEIHGAIFDSWNGSQGILPYPPELPDISAYTGMLKGFDSSKYCKFEQITSPNHKRLRESTTPFIGSGGMNTNWFYPFDQIQDNTPDKIAQSFGMQSPFDLGPSPHSSICYSHSLSNGNSSTSKPAYEAVKFELPSLQYPETDVGSWSTSPPPPLLESVDDFIQSPLPVSALESDCSSPQNSGLLDALLYQARTLSNSKNHYSDKSSNSSTATPCDRALSSTLNKYETDWEDYTDTISPFGATSILNECTVASASANSLDEHPTVRSFNDNIVKTENVDQVWSPNSENQGMSAIKITRPDVLLASDWLQQGSGRDMRQGSMADDIPALREDDLATDSKHTRSGTSLLSQVCGFGSCARSVMPAFCQGSDRG 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g03038 505 Gene3D - 1 43 - -
Arst8g03038 505 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 38 IPR017930 -
Arst8g03038 505 CDD SANT 46 87 IPR001005 -
Arst8g03038 505 SMART sant 1 40 IPR001005 -
Arst8g03038 505 SMART sant 43 91 IPR001005 -
Arst8g03038 505 ProSiteProfiles Myb-like domain profile. 39 89 IPR001005 -
Arst8g03038 505 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 1 459 - -
Arst8g03038 505 Gene3D - 46 92 - -
Arst8g03038 505 ProSiteProfiles Myb-like domain profile. 1 38 IPR001005 -
Arst8g03038 505 SUPERFAMILY Homeodomain-like 1 85 IPR009057 -
Arst8g03038 505 CDD SANT 1 38 IPR001005 -
Arst8g03038 505 Pfam Myb-like DNA-binding domain 2 38 IPR001005 -
Arst8g03038 505 Pfam Myb-like DNA-binding domain 44 87 IPR001005 -
Arst8g03038 505 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 39 93 IPR017930 -
Arst8g03038 505 FunFam Transcription factor GAMYB 46 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g03038 Arst-Chr8 41437956 41443026 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g03038 1 503 MYB Transcription Factor Family AT5G06100 42.412 1.53e-115 349
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Arst8g03038 Myb_DNA-binding 8.9e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g03038 K09422 - gmx:100810415 681.404