Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g03029 ATGCTTACCCCTCCTTCTCCGTCTTCAAAACACTCCCCTCCTCCGTCTCCACTACCACCTTCTACCTCTTCAGCTCCAGCATCTCCTCCTCCTCCTCCTTCCTCCAAAGAAGCCTGCAAGTCTACACTGTACCCAAAACTCTGCCGCTCCATTCTAAAATCCATTCGCTCGTCACCATCCGATCCATACAACTTAGGGAAATTCTCCATCAAACAAAGCCTCAAAAAAGTCAAGAAGCTAGCAAAAGCGTTCGATGACTTCCTCCACCACAAGTCGACTTCTTACCTCAACCAAGCCGAGATCTCGGCTCTCGACGACTGCCGCGACCTCAACCAACTCAACGTAGACTACCTCCAAACCGTCTCCGACAACCTCAAATCTGCGACCTCGTTAGACAGCAATGGAAATGAGGAATTGGTGGAGGACATCGAAACGTATCTGAGTGCGGTGGCTACTAACCACTACACTTGCTATGATGGGTTGGTGGCGGCGAAGAGTAACATCGCAGATGCGCTGGCGGTGCCTCTGAACGATGTGAAGCAACTGTATAGTGTGTCGCTTGGGTTGGTTACGGAGGCTCTGAACAAGAATAGGAAGAAGCATAAGACAAGAAAGCATGGTCTCCCTACTAATGACTACAAAGTTAGACAGCCTCTCAAGAAGCTCATTAAGTTTCTTCACACAACAAGTAATAGTTGCAAAGAATCATCATTCAATTGTACAAGGAAAAGCGAAAGGATTCTTGAAGAAAGCAATAACAGCAAAGGAATTCTACTGAACAGCTATGTGATTGTGAGCATTGATGGGACAGGGAACTTCACTTCCATTGGAGACGCCATTGCTTTTGCTCCGAACAATTCAAGAGCAGAAGATGGGTATTTCCTTATCTATGTCACAGAAGGGTGCTACGAGGAATATGTCACTATCCCCAAACAAAAGACTAACATTTTGCTTGTTGGAGATGGTATCAATAAGACTGTCATCACAGGGAATCATAGTGTCATTGATGGTTGGACAACTTTCAATTCTTCAACTTTTGCTGTTTCTGGAGATAGATTCATGGCAGTAGATATTACATTCAGAAACACAGCTGGCCCTGAGAAGCACCAAGCAGTAGCACTTAGAAGCAACGCTGACCTCTCCACCTTCTACCGATGCAGTTTTGAAGGATATCAAGACACACTCTACGTTCACTCTCTAAGACAATTTTACAGAGAATGTGACATCTATGGAACGGTAGACTTCATCTTTGGTAACGCCGCCGTAGTTTTCCAGAGCTGCAACATCTATGCAAGAAAGCCAATGACTAACCAGAAAAACTCCGTCACGGCGCAAGGCCGGACGGATCCAAACCAAAACACCGGAATCTCAATCCAAAATTGCACCATCCAGGCCGCCCCTGACTTGGCGGCCGACGTGGAATCCACGCCGAATTACTTAGGTAGGCCGTGGAAAGAGTACTCGAGGACGGTTTATATGCAGTCATATATTGGTGCCTTGATTAACCCTTCTGGATGGTTAGAGTGGAATGGGACCGTTGGGTTAGACACACTCTTCTATGGTGAATTTAATAACTATGGTCCTGGTGCTGGTACAAGTAACAGAGTAAAATGGAAGGGTTACAACTTGTTGAATGCTACTCAAGCTTGGAATTTTACTGTTCTTAATTTTACTTTGGGAGATACATGGCTTCCTTACACTGATATACCATACACTGCAGGCCTAGAAGATTAA 1734 0.4544 MLTPPSPSSKHSPPPSPLPPSTSSAPASPPPPPSSKEACKSTLYPKLCRSILKSIRSSPSDPYNLGKFSIKQSLKKVKKLAKAFDDFLHHKSTSYLNQAEISALDDCRDLNQLNVDYLQTVSDNLKSATSLDSNGNEELVEDIETYLSAVATNHYTCYDGLVAAKSNIADALAVPLNDVKQLYSVSLGLVTEALNKNRKKHKTRKHGLPTNDYKVRQPLKKLIKFLHTTSNSCKESSFNCTRKSERILEESNNSKGILLNSYVIVSIDGTGNFTSIGDAIAFAPNNSRAEDGYFLIYVTEGCYEEYVTIPKQKTNILLVGDGINKTVITGNHSVIDGWTTFNSSTFAVSGDRFMAVDITFRNTAGPEKHQAVALRSNADLSTFYRCSFEGYQDTLYVHSLRQFYRECDIYGTVDFIFGNAAVVFQSCNIYARKPMTNQKNSVTAQGRTDPNQNTGISIQNCTIQAAPDLAADVESTPNYLGRPWKEYSRTVYMQSYIGALINPSGWLEWNGTVGLDTLFYGEFNNYGPGAGTSNRVKWKGYNLLNATQAWNFTVLNFTLGDTWLPYTDIPYTAGLED 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g03029 577 CDD PMEI-like_3 38 192 - -
Arst8g03029 577 Gene3D Invertase/pectin methylesterase inhibitor family protein 36 193 IPR035513 -
Arst8g03029 577 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 37 191 IPR035513 -
Arst8g03029 577 SUPERFAMILY Pectin lyase-like 260 574 IPR011050 -
Arst8g03029 577 NCBIfam pectinesterase inhibitor domain 36 191 IPR006501 GO:0004857
Arst8g03029 577 FunFam Pectinesterase 258 575 - -
Arst8g03029 577 ProSitePatterns Pectinesterase signature 2. 409 418 IPR033131 -
Arst8g03029 577 SMART PMEI_2 30 189 IPR006501 GO:0004857
Arst8g03029 577 Pfam Pectinesterase 263 560 IPR000070 GO:0030599|GO:0042545
Arst8g03029 577 MobiDBLite consensus disorder prediction 1 36 - -
Arst8g03029 577 PANTHER PECTINESTERASE 36 565 - -
Arst8g03029 577 Gene3D - 260 577 IPR012334 -
Arst8g03029 577 Pfam Plant invertase/pectin methylesterase inhibitor 36 188 IPR006501 GO:0004857
Arst8g03029 577 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g03029 Arst-Chr8 41350408 41354912 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g03029 6 575 Carbohydrate Esterase AT3G10720 57.239 0.0 680
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g03029 K01051 - gmx:100776781 835.099