Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g02976 ATGGCGCTATGGATGGAAAATGGTTCAGAGCCACTCACCGAAGCCGAGAAGGCAGACCTTGAAGCCATTGCTGCCATTAAAGAATCTGCAGCCATTGAACTCAAGGAAAAGGGTAACGAGTATGTGAAGAAGGGTAAGAAGCATTACTCTGAAGCAATTGATTGCTACACAAGGGCAATTAATCAGAAAGCATTGAATGATTCTGAGAGCTCTGTTCTTTTTGCGAACAGGGCGCATGTCAATTTGCTTCTTGGGAACCACCGGCGTGCCCTCTCTGATGCTCAACAAGCACTCAACTTGTCCCCCTCCAACATAAAGGCAATTTATAGAGCTGTCAAAGCATCTCTATCACTGAATTTATTGGCTGAAGCACAAGAGTATTGCCGAAAGGGTCTTAAGTTGGACCCCAATAATGAGGAACTTAAGAGGCTTGACCAACAGATTCTTACGAAGATATCTGAGAAGGAGAAGCTTGAGGCTGAAGTCTCTAGAGCCATATCGGAGGCAGAAGAACTTGTGTCTGCAATAGAAAATAGAGGATTGAAGATTGGAAAGGCAATGTATCGAGAACTCACCGGGTTAAAGAAACCGGTGTTAGACAAAAATAATATCCTTCATTGGCCTGTCCTTCTTCTGTATGCAGAGGTTATGTCCAGTGATTTCATTGAGGATTTCTGTGAGACTGACATGCTTTCAGTTCACCTTGATATCATGTTTTCAGCAGACCAACCACTCCCATGGGATGTTGAAAACAATTACAAACGTGATTTTGTTGAATTATACTATGAGGCTGGCTCTGGAGTTCGTCTATCAAAGGAGAAACTTCTTCATTGTTTATTAGAGGGAACTGCAGCTTCTCATGTTGATGATGAAGAGAAAGATGCAGTTGAGGATTTTAAACACACTGCAGGTTCCCCAAAATGGATCAAAGTAAATGAGAAGAAAACCCTCCAAGATATCCTCAAAGAGCCTAATTTCGTAATCCCCGAAATCCCAGTCTTCTATGTTGTTTCCAAGCAATCCAGCTTTTATAGCAAGTTCAAATCTGGAAAATGGGCTCCTCCAAGCATATGA 1074 0.4227 MALWMENGSEPLTEAEKADLEAIAAIKESAAIELKEKGNEYVKKGKKHYSEAIDCYTRAINQKALNDSESSVLFANRAHVNLLLGNHRRALSDAQQALNLSPSNIKAIYRAVKASLSLNLLAEAQEYCRKGLKLDPNNEELKRLDQQILTKISEKEKLEAEVSRAISEAEELVSAIENRGLKIGKAMYRELTGLKKPVLDKNNILHWPVLLLYAEVMSSDFIEDFCETDMLSVHLDIMFSADQPLPWDVENNYKRDFVELYYEAGSGVRLSKEKLLHCLLEGTAASHVDDEEKDAVEDFKHTAGSPKWIKVNEKKTLQDILKEPNFVIPEIPVFYVVSKQSSFYSKFKSGKWAPPSI 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g02976 357 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 4 14 354 - -
Arst8g02976 357 Gene3D Tetratricopeptide repeat domain 24 180 IPR011990 GO:0005515
Arst8g02976 357 SMART tpr_5 71 104 IPR019734 GO:0005515
Arst8g02976 357 SMART tpr_5 31 66 IPR019734 GO:0005515
Arst8g02976 357 SMART tpr_5 105 138 IPR019734 GO:0005515
Arst8g02976 357 ProSiteProfiles TPR repeat profile. 71 104 IPR019734 GO:0005515
Arst8g02976 357 CDD CTWD_Cns1-like 170 349 - -
Arst8g02976 357 SUPERFAMILY TPR-like 22 159 IPR011990 GO:0005515
Arst8g02976 357 Pfam Cns1/TTC4 Wheel domain 200 267 IPR044059 GO:0051879
Arst8g02976 357 Coils Coil 141 179 - -
Arst8g02976 357 Pfam Tetratricopeptide repeat 106 138 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g02976 Arst-Chr8 40624463 40628199 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g02976 30 160 Calmodulin-binding Proteins AT3G25230 31.690 1.02e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g02976 K24927 - gmx:100783179 560.066