Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g02971 ATGGTTGACGGCCAGTTTCAAGGGAAGAAGTGGAAGGATGTAAAAGTTGGTGAGATCGTTAAGATTGCTGCGAATGAAACCATTCCATGTGATATTGTGTTGCTTTCAACTAGTGATCCTACTGGGGTTGCTTATGTGCAGACTACTAACCTTGATGGAGAGTCTAATTTGAAGACTCGGTATGCGAAACAAGAGACTCAAGCGAAGGTGCCAGAGAAGGAGAGGTTTATTGGGTTGATTAAGTGTGAGAAGCCAAATAGGAACATATATGGATTTCAGGGTAACATGGAAGTTGATGGAAAGAGGTTGTCGCTTGGGTCCTCCAATATTGTCCTTAGAGGCTGTGAACTCAAGAATACTAATTGGGCTGTTGGTGTTGCCGTGTATTGTGGTCACGAGACCAAAGCGATGCTCAACAACTCAGGTGCTCCGTCGAAGAGGAGCCAGCTTGAGACTCACATGAACTTGGAGATCATTATGCTTTCTGTCTTTCTTGTAGCATTGTGTTCAGTCACCTCGGTTTGTGCTGCTATTTGGTTAAAGAGCCACAAGAATGAGCTGGATTTGATGCCTTATTACAGGAAACTAGATTTTTCGGAAGGTGAAATGGAAAGCTATCAATATTACGGATGGGGATTGGAAATCCTTTTTACTTTCCTTAAGTCAGTTATAGTGTTCCAGGTGATGATCCCTATATCCTTGTACATATCCATGGAGCTCGTCCGTGTTGGTCAGGCATATTTCATGATCCGGGACTCCAGAATGTATGATGCAGCAACAAATTCAAGATTTCAGTGCAGGGCTCTGAACATTAATGAAGACCTAGGCCAAATTAAATATGTCTTCTCTGACAAAACCGGTACACTTACCGAGAACAAGATGGAGTTTCAATGCGCGAGCATCTGGGGTGTCGATTACAGTTCCACAGAAGCAAGTTTGGAGCATGGGCATCAAGCTGAATGCTCTGCTCAAGTGGATGGAAAGGTCTTGAAGCCAAAGATGAAGGTGAAGGTCAATCAAAAGCTTTTGCAATTATCAAAAAATAGTTTTAGAAATGTTGAGGGAAAACAAATATATGATTTTTTCTTAGCACTGGCAGCCTGCAATACAATTGTACCTCTCGTTGTTGATACATCCGATCCTACAGTTAAGCTGATAGATTACCAAGGGGAATCTCCGGATGAACAAGCATTAGCATATGCTGCTGCTGCCTATGGCTTCATGCTCATAGAACGAACCTCAGGTCACATTGTCATTGATATTCATGGAAAAAGGCAAAGGTTCAATGTCTTGGGTTTGCATGAATTTGACAGTGATCGAAAGCGAATGTCAGTTATCTTGGGGTACACAGACAATTCTGTGAAACTTTTTGTAAAAGGAGCAGATACATCCATGCTTAGTGTGATAGATAAATCACTGAACGCTGAAATACTACGAGCAACTGAAACCCATCTTCACTCTTACTCCTCCCTGGGTTTGAGGACACTTGTTATCGGAATGTGGGACCTGAGTGTGTCAGAATTCGATCAATGGCACTTTGCCTTTGAAGCAGCAAGTACTGCTTTGCTTGGAAGGGCTGCCTTACTTCGCAAGGTTGCTAGCAATGTAGAAAATAATCTGTGCATATTGGGTGCAACTGCTATTGAAGATAAACTACAGAAAGGAGTACCGGAATCTATCGAGTCTCTAAGGACTGCGGGTATTAAAGTATGGGTATTAACCGGGGACAAACAGGAAACTGCCATATCAATTGGCTACTCCTCGAAGCTGTTGACAAACAGCATGACTCAAATTATAATCAATAGCAACAATAGAGAGTCATGTAGAAGACATTTACAGAATGCTCTTGTTAAGTCTAGACAACCATTGGCTGCATCTGCAGTTCCCAACAATTTTGAAGGATTTTCTGATGCTATTGGAACACCAATAGCCTTGATTATTGATGGTACAAGCCTTGTGTATATTCTTGACAGTGAACTTGAAGAAGAGCTCTTTGAACTTGCAAGTAGATGTTCTGTTGTTCTGTGTTGTCGAGTGGCTCCGTTGCAAAAGGCTGGAATTGTTGCCCTTGTTAAGAAAAGGACGGCTGACATGACTCTAGCCATCGGAGATGGTGCTAATGATGTCTCGATGATCCAAATGGCTGATGTTGGAGTTGGCATCAGTGGACAGGAGGGTCGGCAAGCTGTGATGGCTTCAGATTTTGCAATGGGACAGTTTCGGTTTTTGGTTCCTCTTTTATTCATACATGGGCATTGGAATTATCAACGACTTGGTTATATGATAATATACAATTTTTACAGAAATGCTATCATTGTTCTCGTCCTGTTTTGGTATGTGCTTTTCACTGCCTACACTGTGACAACTGCTATAAATGAGTGGAGCAGCATGTTGTATTCAATAATCTACACGGCGTTTCCGACTATTGTAGTTGGTATTCTTGACAAGGATCTTAGCAAAAGGATTCTCCTAAAGTATCCTCAGCTTTATGGAGCCGGGCAAAGACGAGAGGCTTACAATAAAAAATTGTTTTGGGTGACAATGGCTGATACTTTTTGGCAAAGCATTGTTGTTTTCTTTGTTCCCCTCTTTGCCTACTGGGGAAGCACTGTAGATATATCAAGCATAGGAGACCTTTGGACACTTTCAGTGGTTATTTTGGTAAATTTGCACTTGGCTATGGACATCATCAGGTGGAATTGGGTTATTCATGCAGTCATTTGGGGCTCTATTGTTGCAACTGTCATTTGTGTCATGATTATCGATGCCATACCGACATTTTCCGGATACTGGGCCATATTTAATACTGCAGCTACTGGATTGTTCTGGTTATGTTTACTAGGAATTTTGATAGCAGCATTGCTTCCTCGTTTTGCTGTGAAATATATTTATCAATATTACTACCCCAGTGATATTCAGATCTCACGAGAAGCCGAGAAATTTGCGAATCAGAGAGTCATCGGCGGCAACAGACAAATAGAAATGTATCCCATCCCTGATGGTCCACCAAGATGA 3015 0.4182 MVDGQFQGKKWKDVKVGEIVKIAANETIPCDIVLLSTSDPTGVAYVQTTNLDGESNLKTRYAKQETQAKVPEKERFIGLIKCEKPNRNIYGFQGNMEVDGKRLSLGSSNIVLRGCELKNTNWAVGVAVYCGHETKAMLNNSGAPSKRSQLETHMNLEIIMLSVFLVALCSVTSVCAAIWLKSHKNELDLMPYYRKLDFSEGEMESYQYYGWGLEILFTFLKSVIVFQVMIPISLYISMELVRVGQAYFMIRDSRMYDAATNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCASIWGVDYSSTEASLEHGHQAECSAQVDGKVLKPKMKVKVNQKLLQLSKNSFRNVEGKQIYDFFLALAACNTIVPLVVDTSDPTVKLIDYQGESPDEQALAYAAAAYGFMLIERTSGHIVIDIHGKRQRFNVLGLHEFDSDRKRMSVILGYTDNSVKLFVKGADTSMLSVIDKSLNAEILRATETHLHSYSSLGLRTLVIGMWDLSVSEFDQWHFAFEAASTALLGRAALLRKVASNVENNLCILGATAIEDKLQKGVPESIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNSMTQIIINSNNRESCRRHLQNALVKSRQPLAASAVPNNFEGFSDAIGTPIALIIDGTSLVYILDSELEEELFELASRCSVVLCCRVAPLQKAGIVALVKKRTADMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAMGQFRFLVPLLFIHGHWNYQRLGYMIIYNFYRNAIIVLVLFWYVLFTAYTVTTAINEWSSMLYSIIYTAFPTIVVGILDKDLSKRILLKYPQLYGAGQRREAYNKKLFWVTMADTFWQSIVVFFVPLFAYWGSTVDISSIGDLWTLSVVILVNLHLAMDIIRWNWVIHAVIWGSIVATVICVMIIDAIPTFSGYWAIFNTAATGLFWLCLLGILIAALLPRFAVKYIYQYYYPSDIQISREAEKFANQRVIGGNRQIEMYPIPDGPPR 1004
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g02971 1004 SUPERFAMILY Calcium ATPase, transduction domain A 2 136 IPR008250 -
Arst8g02971 1004 SUPERFAMILY Calcium ATPase, transmembrane domain M 134 969 IPR023298 -
Arst8g02971 1004 SFLD p-type atpase 266 753 IPR044492 -
Arst8g02971 1004 SFLD p-type atpase 266 753 IPR044492 -
Arst8g02971 1004 FunFam Phospholipid-transporting ATPase 539 742 - -
Arst8g02971 1004 PRINTS P-type cation-transporting ATPase superfamily signature 282 296 - -
Arst8g02971 1004 PRINTS P-type cation-transporting ATPase superfamily signature 702 721 - -
Arst8g02971 1004 ProSitePatterns E1-E2 ATPases phosphorylation site. 284 290 IPR018303 -
Arst8g02971 1004 FunFam Phospholipid-transporting ATPase 387 520 - -
Arst8g02971 1004 Gene3D - 383 518 IPR023299 GO:0000166
Arst8g02971 1004 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 288 556 IPR023299 GO:0000166
Arst8g02971 1004 Gene3D - 1 139 - -
Arst8g02971 1004 Pfam Cation transport ATPase (P-type) 391 467 - -
Arst8g02971 1004 SUPERFAMILY HAD-like 269 743 IPR036412 -
Arst8g02971 1004 NCBIfam HAD-IC family P-type ATPase 214 309 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Arst8g02971 1004 NCBIfam HAD-IC family P-type ATPase 673 788 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Arst8g02971 1004 SFLD Haloacid Dehalogenase 266 753 - -
Arst8g02971 1004 SFLD Haloacid Dehalogenase 266 753 - -
Arst8g02971 1004 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 5 980 - -
Arst8g02971 1004 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 5 980 - -
Arst8g02971 1004 NCBIfam phospholipid-translocating P-type ATPase 4 977 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Arst8g02971 1004 NCBIfam phospholipid-translocating P-type ATPase 4 977 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Arst8g02971 1004 Gene3D - 539 742 IPR023214 -
Arst8g02971 1004 Pfam Phospholipid-translocating P-type ATPase C-terminal 730 970 IPR032630 -
Arst8g02971 1004 Pfam E1-E2 ATPase 3 240 - -
Arst8g02971 1004 PRINTS Sodium/potassium-transporting ATPase signature 275 296 - -
Arst8g02971 1004 PRINTS Sodium/potassium-transporting ATPase signature 779 799 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g02971 Arst-Chr8 40575838 40582409 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g02971 3 1004 Primary Pumps ATPases AT5G04930 68.620 0.0 1453
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g02971 K14802 - gmx:100784988 1664.05