Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g02968 ATGGCAAAACCAGTTTCCAATTCCAATTCCCACTCACACCTAATTCCATTACTCATTTTGATCCTGTTCTTTTCCACCACCTTCCATCTCTCAGAGCAGTTACAATTTTCTCAGACCCAAACACTTCAAAACTTCCAGAACCTTCTCGGCTACCCCCAAGAACTTTTAACCCTCAACACCAACACAGACTTCTGCAACATTGAACCAACCCCACACTTCACACTCGTTTGCTATGAAGAAAATCTCACACAGCTGCATGTTGTTGGCAACGGTTTCAGTCCCAACGCATTGCCACAGAACTTCTCGTCACAAACACTATTCGCCACACTCGCCACACTCTCAAGCTTAAAAGTCCTCACTCTCGTTTCTCTTGGTCTCTGGGGTCCAATACCTCCAACCATTTCTCAGTTATCTTCTCTTGAAATACTCAACATAAGTTCAAACCATTTCAGTGGTGTTGTTCCGTCACAGATTTCACTTCTCAAGAACCTTCAATCACTGGTTCTTGATAACAACCTTTTACAAGGCGTTATTCCAAGCGAAATAGGGACTCTTCAAGGCTTGGCTGTGCTTAGTATGAAGAACAATTCGCTCAGTGGAACCGTTCCAGATTCAGTTAGAACATTACAAACTCTGCGAGTTTTGGATTTGTCAAATAACAAAATCTCAGGGGATTTACCTAGCCTTCGCCATCTGTCGAACCTTCAAGATCTTAACCTGGAGAACAACAAATTCGGGCCTCATTTTCCATCTCTTCCAACTAAATTGGTTTCGCTTGTTCTAAAGAATAACAGCTTTAAGCTTGGTCTTCCTTCGGGTTTATCCACTTTCTACCAGCTTCAGAAACTCGACGTTTCGCTTAATGGTTTCGTTGGGCCGTTCTTGCCTGCATTGTTATCTCTTCCTTCTCTTAGTTACCTTGATGCTTCCTCAAACAAGTTCACCGGAATGCTGTTCAAGAACGACACGTGTAATGATGAGCTCGTTTTCGTGAACTTGTCTTCGAATCTGTTGAGAGGGGAACTTCCCACATGTTTGAAACCAGTGGCCAATAAGCCGGTCGCTCTATACGCCGGGAATTGTTTATCGAACGACGACGGCCGGAATCAGAACCCTGCCAGCTTCTGCAGCAACGAGGCTATTGCTGTTAAAATCATGCCTCCTCAAGAGAATCACAAGAGGACAACCGGAAAAACGGTTCTCGTGTCCAGTATGGGAGGGATAGTTGGTGGAGCATTGATTGTTGGAGTGGTTATTTTGGTAGTTAGCCGGGTTCATAAGAAGGGTAGTGTTGTAAAAACACCTGTGAAACCGACCTTGGAGATTGTTATCAGCCAGGCGAAAAAGGAAGAGGAAGACGAAGACAAAGAGGAAGAAGAAAAGGAAAAGGAAAAGGAAGGCATGGTAGCTGCTTCTTCAAGATCCTTGTCCATATCCGTGTTGCAGCGGATTATGAAAAGGGTGCCGGATAAGGGCGCTGTGGAGTCGTTTACAAGGTCCATGAAGGAGCATGTCATGAACAGAATGCATAACAAAAATGGTGTGAGGACAAGTACAAGGTCTATAATAGAACATGCATCTTCAGTCAACACAGCAAAGCTGCTCACAGATGCAAGGTATATATCAGAAACAATGAAGATGGGAGCCAGCTTTCCAGCTTACAGAACCTTTGCTTTGGATGAACTGAAGGAAGCTACAAATAATTTTGATGCATCAAGTTTCGTTAGTGAGGGTCCACATGGCCAGATATACAAGGGGGTGCTCTCCGATGGAATGCCTATTACAATCAGAGGATTGAAAATGCGAAAGAGACATAGCCCTCAAAATTACATGCACCACATTGAGTTGATTTCGAAACTTCGGCATTCACACTTGATCAGTGCTCTTGGTCATTCATTTGAATGCAATCAGGATGATTCAAGCGTCAGCACTATATTCCTCATATTTGAGTTTGTTCCAAACAAGAGTTTAAGGAGTTGTGTGTCTGTGTCAGCAGGATCTCCTAGTGAAAAGCTTTCTTGGACGCAGAGGATACTAGCCGCGATTGGAGTGGTAAAAGGCATTCAATTCTTGCACACAGGGATAGTGCCTGGACTATATTCCAATAATCTGAAGATAACTGATGTTCTTTTGGATAACAATCTTAATGTTAAAATAAGCAGTTATAATCTGCCACTCTCTGCAGAAACTAGAAGACTGGTCAGCAATGGACCTTACCCTGGATTAAAAGGAAACTTCCAAGAAAGGATAATGGATGCAGACAAGAATGATGTCTATGATATTGGGGTAATCTTGCTTGAAACCATTTTGGGTCGACCATTGATGTTCCACAATGAAGTTGGCACTCTCAAAGATCTTTTACAAGTAAGCATAAAAACTGATGATATGGCAAGGAGGAGTATTGTTGACCCAGCAGTTCACAAGGAATGCTCAAATGAATCATTAATGACAATGATGGAGATTTGTGTAAGGTGCCTCTCCAATGATCCTACTGAAAGGCCTTCTGTGGATGATGTTCTCTGGAATCTGCATTTCGCTGTGCAAGTTCAGAATTCTTGGAGGAGAGATTCTAATGATCAGAGAGGCTCACCTGCATCATCATCCTCCCATGAGACAAGAGTTGTATGA 2628 0.4296 MAKPVSNSNSHSHLIPLLILILFFSTTFHLSEQLQFSQTQTLQNFQNLLGYPQELLTLNTNTDFCNIEPTPHFTLVCYEENLTQLHVVGNGFSPNALPQNFSSQTLFATLATLSSLKVLTLVSLGLWGPIPPTISQLSSLEILNISSNHFSGVVPSQISLLKNLQSLVLDNNLLQGVIPSEIGTLQGLAVLSMKNNSLSGTVPDSVRTLQTLRVLDLSNNKISGDLPSLRHLSNLQDLNLENNKFGPHFPSLPTKLVSLVLKNNSFKLGLPSGLSTFYQLQKLDVSLNGFVGPFLPALLSLPSLSYLDASSNKFTGMLFKNDTCNDELVFVNLSSNLLRGELPTCLKPVANKPVALYAGNCLSNDDGRNQNPASFCSNEAIAVKIMPPQENHKRTTGKTVLVSSMGGIVGGALIVGVVILVVSRVHKKGSVVKTPVKPTLEIVISQAKKEEEDEDKEEEEKEKEKEGMVAASSRSLSISVLQRIMKRVPDKGAVESFTRSMKEHVMNRMHNKNGVRTSTRSIIEHASSVNTAKLLTDARYISETMKMGASFPAYRTFALDELKEATNNFDASSFVSEGPHGQIYKGVLSDGMPITIRGLKMRKRHSPQNYMHHIELISKLRHSHLISALGHSFECNQDDSSVSTIFLIFEFVPNKSLRSCVSVSAGSPSEKLSWTQRILAAIGVVKGIQFLHTGIVPGLYSNNLKITDVLLDNNLNVKISSYNLPLSAETRRLVSNGPYPGLKGNFQERIMDADKNDVYDIGVILLETILGRPLMFHNEVGTLKDLLQVSIKTDDMARRSIVDPAVHKECSNESLMTMMEICVRCLSNDPTERPSVDDVLWNLHFAVQVQNSWRRDSNDQRGSPASSSSHETRVV 875
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g02968 875 SMART LRR_typ_2 161 185 IPR003591 -
Arst8g02968 875 SMART LRR_typ_2 137 160 IPR003591 -
Arst8g02968 875 SMART LRR_typ_2 209 231 IPR003591 -
Arst8g02968 875 SMART LRR_typ_2 232 259 IPR003591 -
Arst8g02968 875 SMART LRR_typ_2 301 321 IPR003591 -
Arst8g02968 875 FunFam Leucine-rich repeat receptor protein kinase EMS1 154 252 - -
Arst8g02968 875 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 118 860 - -
Arst8g02968 875 Gene3D Ribonuclease Inhibitor 158 249 IPR032675 -
Arst8g02968 875 MobiDBLite consensus disorder prediction 854 875 - -
Arst8g02968 875 Gene3D Transferase(Phosphotransferase) domain 1 652 866 - -
Arst8g02968 875 ProSiteProfiles Protein kinase domain profile. 569 847 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g02968 875 Pfam Protein kinase domain 577 840 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g02968 875 Gene3D Ribonuclease Inhibitor 250 361 IPR032675 -
Arst8g02968 875 ProSiteProfiles Leucine-rich repeat profile. 211 233 IPR001611 GO:0005515
Arst8g02968 875 Gene3D Phosphorylase Kinase; domain 1 530 651 - -
Arst8g02968 875 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 652 859 - -
Arst8g02968 875 Coils Coil 440 467 - -
Arst8g02968 875 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 543 651 - -
Arst8g02968 875 Pfam Leucine Rich repeats (2 copies) 211 244 IPR025875 -
Arst8g02968 875 SUPERFAMILY L domain-like 37 343 - -
Arst8g02968 875 SUPERFAMILY Protein kinase-like (PK-like) 548 845 IPR011009 -
Arst8g02968 875 Gene3D Ribonuclease Inhibitor 37 157 IPR032675 -
Arst8g02968 875 MobiDBLite consensus disorder prediction 447 469 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g02968 Arst-Chr8 40508623 40513789 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g02968 471 869 Miscellaneous Gene Families AT3G03770 54.237 2.96e-136 424
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Arst8g02968 Pkinase 5.3e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g02968 - - adu:107462774 1564.28