Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g02926 ATGCCCGGAAACATTCTTGAGATTGAGCTTTCTAAGTTTATGACCTTTGATCACGTGAAATGCAAACCTGGGCCTCGATTGAATCTTGTAGTTGGACCCAATGGTTCTGGAAAAAGTTCTCTCGTGTGTGCTATTGCACTTGGCCTTTGTGGAGAGCCTCAGTTGCTTGGGCGAGCAACTAGTGTCGGGGCATATGTGAAGCGGGGAGAGGAGTTTGGATCCATTAAGATTACATTGAGAGGGAATAACAAAGATGAGTGTATTGCCATTACTCGCAAAATAAATACTAACAACAAGTCTGAGTGGTTGTTAAATGGGAATATAGTTCCCAAAAGTAATGTAGCTGAAACTGTTAAAAGGTTTAACATCCAAGTCAGTAACTTGACTCAATTTTTACCACAAGACAGGGTCTGTGAGTTTGCAAAGTTAACTCCAGTGCAGCTCCTGGAAGAAACTGAAAAGGCTGTTGGTGATCCACAACTTCCCGAGCAACATCGTGCACTAGTTCATAAAAGTTATGCATTGAGGAATATTGAAGTGTCTATGGAGGGGCATTTAGGTACCTTGAATCTGTTGAAGAAACAAAATGCTGAGCTAGAGAAGGATGTTGAGCGTGTCCGTCTAAGAGATGAGATTCTTGCCAAGGCTGAAACCATGAAAAAGAAATTGCCTTGGCTTGAATATGACATGAAGAAGGCTCAATATTGGGAAGCTAAGCAACATGAGAATAATGCGGCAAAGGCAATGGAGGAGTCTGCAAAGTTACTAAATGATCTTAAGGATCCTATTAACAAACAGAAGGAGGAACAGACTGCACTAGATGCCAAATGGAAAAAGGTTGACAGCCGTATAAAAGAGAACTACAAGAAGCGGACGGAACTTCTGGATAAAGAGAGCCAACTGGATGTGGAGATGCAAAGGAATTACAAGGATATGGAAGATTTGAGAAGACAGGAGGAAACTAGGCAAAAAAAAATTGAAAAAATTAGGGAGGAACTTGCTGCTTCTGAACTTGAACTTGAGAATCTAGGTCCTTCTGAACCTCGTCAGCAAGAAGAGCTGCAAAGACTAAGAGCTAAAGCCTCTGATATCGATTATGAAGCTAAGCAAGTGATGAAGCCTCGCATATCACTACTAGAGAGGGAAATAAGTCATAAAGTGACATCCTTGAATGAATGTAAAAAAAGGTTGAGCGAAATGAACAATAAAATTACAAAATGTTTGCATGTATTGCAAGAAGCAGGGACAGACAAAATTTTTGAAGCCTTTAAATGGGTCCAAGAACATCGTAAAATCTTCAATAAGGGGGTTTATGGCCCAGTATTATTAGAGGTGAATGTCTCAAATCAAGATCATGCTGCTTATCTAGAGGGTCAAGCTGCGCAATATATTTGGAAGTCTTTCATAACACAAGATCCTCGTGATCGGGACCTCTTGGTGCAGCACCTAAAGTTCTTTGATGTTCCAGTTTTAAATTATACTGGTGAAGTTGACCAACAAAGAGAGACTTTCAGAATTACTGAAGATATGCATGCCCTTGGCATTCACTCCCGGCTGGACCAAGTTTTTGATGCTCCTAGTGCTGTCAAGGAGGTTTTGATTCGCCAGTTTAATTTGGATCATTCTTATATTGGATCCAGAGATACTGATAAGAGGGCTGACGAGGTTCCAAAATTGGGAATTATAAATTTGTGGACACCGGAAAATCACTACCGGTGGTCTAAGTCTAGATATGGGGGTCATATCTCAGCCATGGTCGAACAAGTGGGAGATCCGAAGTTTATAGTGAATAGTTCAAATGCGGGAGAAATTGAGAAGCTGGAATCCCAGGAAAAGGATCTTGAAGGAATTATTGCTACCTTGGAGGAAGATGCTAAAAGATCTCGAGATAAGCAAAAGGCCTTAATTAATGAATATGCTGATCTTCGTAGAAAGATGGAGGAGATTAATAAATTATTCCAACTAGAGAAACAAAAACGTGAAGGTATTCACAACCGTATTGGGAAAAAGAGAGCTGCACTGAAATCATTGGAGGAATCCATTGATAGAGATACCGAGATGGCAAAGCTTGTTGATCAGGCAAATAAACTTCACATTCTGAGATTCCGTAATGCAATGAAATTAAAGGAACTTCTCGTTGAGTGTGTTGCTTACAGAAGAAGCTTTATTGAACAACGGATGTCTTCTATTCAATTTGATGCTAAGATTCGCAAATTGGAGGCAGATTTAAAGCAGCATGAGAGGTCTGCCGTTGAAGCAACTATACAATTTCAGAACCTTAAGAAAGAAACTGAGGCTTGTGAACAGCAGCTGACAGATTCTTTGAATCTTGCTGAATCAATTGCGCCATTGACACCTGAGCTACAGAACAAATTTCGTGAGATGCCCACTACAATTGAGGATTTAAATAATGCTATTCAAGAAACAATCTCTGAGGCCCGGGCAATATTTACACTTAATAATAATGCATTGGAGGAGTATGAGTATCGGCGACAAAAGATAGAAGAGCTTGCAGAAAAAATCGCTGCAGAGAAGGAAGAATATGGAAGGTCTTCTACTGAAATAAAGGAAATCGAGGATAAATGGCTTCCAGCACTTCGAAACCTTGTGGCACTGATCAATGAAACTTTTAGCCGTAATTTTCAAGAGATGGCTGTTGCTGGTGAAGTTTCACTAGATGAGCATGATAAGGAGTATGCCCAATATGGAATTTGTATTAAAGTCAAATTCAGACAAAATGGAAAACTTGAAGTTCTTAGTGCTCATCATCAATCTGGAGGGGAGCGGTCAGTTTCAACTATCGTATATCTTCTTTCCCTTCAAGATCTTACTAATGTCCCATTTAGAGTTGTTGATGAAATCAACCAGGGCATGGACCCAATAAACGAAAGAAAGATGTTCCAGCAACTGGTCAGAGCTGCAAGCAAGCCCAATACACCACAGTGTTTCTTGCTTACCCCCAAATTGCTACCAGACCTGCAATATAGTGAAGCATGCACTATATTGAACGTGTTTAATGGCCCTTGGATTCCCCAACCCTCAAAGCTATGGGAGGAAGGTGAAAGATGGAGTATTGTCACGGGTCTCTTGGGGGAAACCCATTGTTGA 3108 0.4054 MPGNILEIELSKFMTFDHVKCKPGPRLNLVVGPNGSGKSSLVCAIALGLCGEPQLLGRATSVGAYVKRGEEFGSIKITLRGNNKDECIAITRKINTNNKSEWLLNGNIVPKSNVAETVKRFNIQVSNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLPEQHRALVHKSYALRNIEVSMEGHLGTLNLLKKQNAELEKDVERVRLRDEILAKAETMKKKLPWLEYDMKKAQYWEAKQHENNAAKAMEESAKLLNDLKDPINKQKEEQTALDAKWKKVDSRIKENYKKRTELLDKESQLDVEMQRNYKDMEDLRRQEETRQKKIEKIREELAASELELENLGPSEPRQQEELQRLRAKASDIDYEAKQVMKPRISLLEREISHKVTSLNECKKRLSEMNNKITKCLHVLQEAGTDKIFEAFKWVQEHRKIFNKGVYGPVLLEVNVSNQDHAAYLEGQAAQYIWKSFITQDPRDRDLLVQHLKFFDVPVLNYTGEVDQQRETFRITEDMHALGIHSRLDQVFDAPSAVKEVLIRQFNLDHSYIGSRDTDKRADEVPKLGIINLWTPENHYRWSKSRYGGHISAMVEQVGDPKFIVNSSNAGEIEKLESQEKDLEGIIATLEEDAKRSRDKQKALINEYADLRRKMEEINKLFQLEKQKREGIHNRIGKKRAALKSLEESIDRDTEMAKLVDQANKLHILRFRNAMKLKELLVECVAYRRSFIEQRMSSIQFDAKIRKLEADLKQHERSAVEATIQFQNLKKETEACEQQLTDSLNLAESIAPLTPELQNKFREMPTTIEDLNNAIQETISEARAIFTLNNNALEEYEYRRQKIEELAEKIAAEKEEYGRSSTEIKEIEDKWLPALRNLVALINETFSRNFQEMAVAGEVSLDEHDKEYAQYGICIKVKFRQNGKLEVLSAHHQSGGERSVSTIVYLLSLQDLTNVPFRVVDEINQGMDPINERKMFQQLVRAASKPNTPQCFLLTPKLLPDLQYSEACTILNVFNGPWIPQPSKLWEEGERWSIVTGLLGETHC 1035
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g02926 1035 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 5 295 IPR027417 -
Arst8g02926 1035 FunFam Structural maintenance of chromosomes 5 831 1002 - -
Arst8g02926 1035 Coils Coil 238 258 - -
Arst8g02926 1035 Coils Coil 182 209 - -
Arst8g02926 1035 Gene3D - 829 995 IPR027417 -
Arst8g02926 1035 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 5 1 1027 IPR027131 GO:0000724|GO:0005524|GO:0006281|GO:0016887|GO:0030915
Arst8g02926 1035 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 5 1 1027 IPR027131 GO:0000724|GO:0005524|GO:0006281|GO:0016887|GO:0030915
Arst8g02926 1035 Gene3D - 4 184 IPR027417 -
Arst8g02926 1035 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 717 986 IPR027417 -
Arst8g02926 1035 Coils Coil 312 332 - -
Arst8g02926 1035 Coils Coil 729 770 - -
Arst8g02926 1035 Pfam RecF/RecN/SMC N terminal domain 5 976 IPR003395 -
Arst8g02926 1035 Coils Coil 604 659 - -
Arst8g02926 1035 Coils Coil 820 861 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g02926 Arst-Chr8 39994281 40021657 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g02926 1 1024 Structural Maintenance of Chromosomes family AT5G15920 55.664 0.0 1129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g02926 K22803 - gmx:100778678 1431