Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g02894 ATGGAGGCCGCAGTGATCGATGCCGGCTCAATGCTCCTCAAGGCCGGTTTCGCAGTTCCCGATCAACCTCCTGCATTGATAATTCCCACACAGATGAAGCGAATGCTTGATGATGGGTCAGGAAATGATAATCCAGCAGTAGATGACTTTGCGGTTGATCCGGTGGTGAGAGGTTTTGTAAGTGATTGGGATGCCATGGAGGATTTGTTGCATTATGTATTGTACACTGGGCTTGGATGGGAAATGGGAAATGAAGGCCAGATACTATTTACAGATCCACTTTGTACCCCAAAGGCTAACAAAGAACAGTTAGTGCAACTAATGTTTGAAACATTCAACATATCAGGGTTTTATGCATCGGAACAGGCAGTGTTGTCGCTATATGCTGTGGGACGTATCTCTGGATGCACAGTTGATATTGGTCATGGAAAAATAGATATTGCACCAGTAATTGAAGGTGCTGTTAACCACATTGCCTCAAGAAGATTTGAGTTTGGAGGTACTGATCTAACCAATTTCCTGGCACAAGAACTTGGCAAATCCAATCCACTAGTCAATATCAGCTTGTCTGATGTTGAGAAAATAAAACAACAATACTCGTGTTGTGCTGAAGATGAATTAGCTTATCAGAAGACCCGGAATTCTTGCCCTGAGGAGAAACATACCCTTCCTGATGGACAGGTGATAACAATTGGAAGAGAAAGATATACTGTTGGTGAAGCTTTATTCCAGCCATGTCTATTGGGTTTGGAGGCTCATGGCATTGTTGACCAGCTTGTTCGAACTATTTCAACTGTGTCATCTGATAATCATCGGCAACTCCTGGAAAATACTGTGGTCTGTGGTGGCACTTCTTCTATGACTGGTGGTACCCCCCTCTTTCCTTCCACAGCGAGAGCTCGGCTACCCGACAGATCCAAACCCAGCACGACCGTGGTTGAAGCGTTATCACCCCCTCAAATAACCACTAGACCTGTCCGGCAACCGACAACCGAACATTGGCGCTGTCTGTGGGGATTGCCTAGATGGACGTTGTGCCGGGCCCGGAGACCAAGGCCGAGGAGCCGGAGCGGAAGGGGCGGCCTCCGTCGCCTCACTAAGAGGACGGCGAAGGTCCCCCCGACAACACACCGAACCGCACACGAGGATGCGACCCTTCGGGGGAACGGGCGGCGACAGCGCCATAATAATGCAGGAGCTACGTCACAGGGTCCAGAACCTGGAGCGGCAACTGGCCGACCAGGAGCGCGACGGACGAACCACCGATCCCAGCTACACCCCATCCCCTGA 1290 0.4992 MEAAVIDAGSMLLKAGFAVPDQPPALIIPTQMKRMLDDGSGNDNPAVDDFAVDPVVRGFVSDWDAMEDLLHYVLYTGLGWEMGNEGQILFTDPLCTPKANKEQLVQLMFETFNISGFYASEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEGAVNHIASRRFEFGGTDLTNFLAQELGKSNPLVNISLSDVEKIKQQYSCCAEDELAYQKTRNSCPEEKHTLPDGQVITIGRERYTVGEALFQPCLLGLEAHGIVDQLVRTISTVSSDNHRQLLENTVVCGGTSSMTGGTPLFPSTARARLPDRSKPSTTVVEALSPPQITTRPVRQPTTEHWRCLWGLPRWTLCRARRPRPRSRSGRGGLRRLTKRTAKVPPTTHRTAHEDATLRGNGRRQRHNNAGATSQGPEPGAATGRPGARRTNHRSQLHPIP 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g02894 429 PANTHER ACTIN 4 289 IPR004000 -
Arst8g02894 429 PRINTS Actin signature 45 67 IPR004000 -
Arst8g02894 429 PRINTS Actin signature 100 113 IPR004000 -
Arst8g02894 429 PRINTS Actin signature 125 144 IPR004000 -
Arst8g02894 429 PRINTS Actin signature 217 233 IPR004000 -
Arst8g02894 429 MobiDBLite consensus disorder prediction 349 366 - -
Arst8g02894 429 Gene3D - 5 122 - -
Arst8g02894 429 Gene3D Actin; Chain A, domain 4 165 252 - -
Arst8g02894 429 Pfam Actin 2 289 IPR004000 -
Arst8g02894 429 Gene3D - 123 289 - -
Arst8g02894 429 MobiDBLite consensus disorder prediction 349 429 - -
Arst8g02894 429 SUPERFAMILY Actin-like ATPase domain 2 138 IPR043129 -
Arst8g02894 429 MobiDBLite consensus disorder prediction 375 390 - -
Arst8g02894 429 FunFam Actin-related protein 7 165 252 - -
Arst8g02894 429 FunFam Actin-related protein 7 4 127 - -
Arst8g02894 429 SMART actin_3 1 424 IPR004000 -
Arst8g02894 429 SUPERFAMILY Actin-like ATPase domain 131 305 IPR043129 -
Arst8g02894 429 CDD NBD_sugar-kinase_HSP70_actin 4 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g02894 Arst-Chr8 39671288 39677344 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g02894 5 320 Cytoskeleton Gene Families AT3G12110 35.015 6.62e-48 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g02894 K16615 - gmx:100794153 536.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g02894 8 39671288 39677344 Arst8g02894 8 39671288 39677344 ECH