Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g02887 ATGGATACCCTGGATACCCAAGTAGCGCCCTTTCTCCTTCTCCTCCTCTTCCTCTTCACCATTTTGGTATCTGGTACTGAATCAGCATTGTGCCCCTTTGATCTCAACTACGTTGACACCTTAACATGGGACACATCAACATGCAGAGACCCAATAGACACACAACACTGCTGCCAAACCCTTCTGAGTCTTATCGGCATTGGACTATCTCAGCACCTCAAACAAACCTCCCAGTTCCAACTACAGGATAACAATACTTCCGCATCTTGCTTATCCGAATTCAGATCCAAGCTTTCACCCTTATCGCTGAACACATCTATGGTGTCCACATGCTTCCAGAACTCGGATTTCGTCTCGAATTCTTCGAGTTGTGCGGGGATTGAGAACATCCAAGATTGGAAGCAGAAGGTGGGGTTAATCTCCCCACTGGACACTTCTTGCAGTGGCGACATGAATGGCCAAACGCAGTGCAGCATTTGCACGGATGCGGGATTCAAGGTCACTGCAGACTTGAACCAAAAGGACCCAAATTCGACCAAATGCTTCTACTTCACAATCTTGTATGCTGCTGGTGTTGTTAACCAGTTTGGTCCAAGCAATTTGGGCACGGCTTCTTGCATTCTGGGCTTGCCACTGTCGACGAAGAAAGGGTCGTGGAACAAGGAACAAGTTTTGAAATTGGTTTTTGGAATATTGGGTGCTCTTGGTGGTGTTATTCTCACCTCGGTTCTGATTGTTTTGTTTAGAAAGTGGGATAGGAGGAGGAGGGAGAACCTTTATCACAGGTCAATCGAAAACAGCGTTAGGAACAGCGTTTTGCCTAATGCGGGGGCGAAATGGTTTCATATTTCAGAGCTTGAACGAGCCACGAACAAGTTTTCACAGAGGAATATGATTGGTCAAGGTGGTGATGGGGTAGTGTACAAGGGGACTCTTTCAGACGGCACTTTGGTTGCGGTTAAAGAGATTCTGAACTTGGAAAGCAAAGGGGATGAGGAGTTTTGCTATGAGGTAGATATCATAAGCAAAATAAAGCATAGAAATCTTCTTGCTCTTCGGGGTTGTTGCGTTACGAGCGATAACTTGAAAGGTAAAAGGAGGTTTCTGGTTTATGATTATATGCCTAATGACAGCCTCAGTTACCAATTGTCCATTGCTGGTGCTAATAGGCTAACATGGCCACAGAGGAAGAGCATAATTCTTGATGTGGCTAAGGGGCTTGCTTATTTGCATTACGAAATCAAACCCCCTATTTATCACCGCGACATTAAAGCGACCAACATACTTCTTGATAGCAAGATGAAAGCAAAAGTGGCAGATTTCGGATTAGCAAAACAGGGCAGTGAAGGCCAGTCTCACCTCACAACAAGGGTGGCTGGCACATACGGTTATCTAGCGCCAGAGTACGCGCTATACGGCCAACTAACAGAGAAGAGTGATGTGTATAGTTTTGGAATTGTGATCTTAGAGATCATGAGTGGGAGGAAGGTACTAGACACGACGAATTCGAATTCAAACGTGGTCTTGATCACGGATTGGGCGTGGACGCTCGCGAAATCAGGTCTGACGAAGGAGATTCTTGATGAGTCAATAAGGGGAGAAGGGCCAGAGAAGATCATGGAAAGGTTTGTTCTTGTTGGGATTCTTTGTGGTCATGCAATGGTTGCGCTTAGGCCTACCATTGCTGAGGCAATGAAGATGTTGGAGGGTGATATTGACATTCCTGAGTTGCCAGACAGGCCGGTACCACTTGGTCATGAGTCGTTTCGATCTTCTCTTCTCTTTGGATTGCAAAGAAGCGGAAGGTCCATGCCATATTTCTCATCTTATGAAACAAATGTGACTACGAGCACAATGTAG 1860 0.4575 MDTLDTQVAPFLLLLLFLFTILVSGTESALCPFDLNYVDTLTWDTSTCRDPIDTQHCCQTLLSLIGIGLSQHLKQTSQFQLQDNNTSASCLSEFRSKLSPLSLNTSMVSTCFQNSDFVSNSSSCAGIENIQDWKQKVGLISPLDTSCSGDMNGQTQCSICTDAGFKVTADLNQKDPNSTKCFYFTILYAAGVVNQFGPSNLGTASCILGLPLSTKKGSWNKEQVLKLVFGILGALGGVILTSVLIVLFRKWDRRRRENLYHRSIENSVRNSVLPNAGAKWFHISELERATNKFSQRNMIGQGGDGVVYKGTLSDGTLVAVKEILNLESKGDEEFCYEVDIISKIKHRNLLALRGCCVTSDNLKGKRRFLVYDYMPNDSLSYQLSIAGANRLTWPQRKSIILDVAKGLAYLHYEIKPPIYHRDIKATNILLDSKMKAKVADFGLAKQGSEGQSHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILEIMSGRKVLDTTNSNSNVVLITDWAWTLAKSGLTKEILDESIRGEGPEKIMERFVLVGILCGHAMVALRPTIAEAMKMLEGDIDIPELPDRPVPLGHESFRSSLLFGLQRSGRSMPYFSSYETNVTTSTM 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g02887 619 SMART serkin_6 293 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g02887 619 ProSitePatterns Serine/Threonine protein kinases active-site signature. 418 430 IPR008271 GO:0004672|GO:0006468
Arst8g02887 619 Gene3D Phosphorylase Kinase; domain 1 255 373 - -
Arst8g02887 619 SUPERFAMILY Protein kinase-like (PK-like) 278 584 IPR011009 -
Arst8g02887 619 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 374 576 - -
Arst8g02887 619 Gene3D Transferase(Phosphotransferase) domain 1 374 582 - -
Arst8g02887 619 Pfam Protein kinase domain 295 512 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g02887 619 FunFam Receptor-like serine/threonine-protein kinase At4g25390 258 373 - -
Arst8g02887 619 Pfam SPARK 28 182 IPR043891 -
Arst8g02887 619 ProSiteProfiles Protein kinase domain profile. 293 555 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g02887 619 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 74 588 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g02887 Arst-Chr8 39587833 39590176 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g02887 20 590 Receptor kinase-like Gene Family AT1G11050 52.551 0.0 586
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Arst8g02887 Pkinase 1.9e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g02887 - - gmx:100820563 944.88