Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g02880 ATGGTGAAGGAGAAAAGCAAGAATAATGGGAGTAAGCAAAGGAAAGGGCTGTGGTCACCGGAGGAAGATGAGAAGCTGATAAGGTACATGATAACAAAGGGAGAAGGGTGTTGGAGTGACATTGCAAGAAATGCCGGCCTAGAGCGCTGCGGCAAGAGCTGCCGCCTTCGTTGGATAAACTACCTCCGACCCGACCTTAAACGCGGCGCCTTTTCTCTCCAAGAGGAAGACCTCATCATCCACTTGCACTCCATTCTTGGCAACAGATGGTCACAAATCGCGGCACGTCTACCTGGACGCACAGACAACGAAATCAAGAACTTCTGGAACTCCACGGTGAAGAAAAGGTTAAAACTGAACAACAACTCAACTTCATCACCAAACAACACTGACTCATCAGAGCCTAATAGCATCAGGGACAACAACGTTGTCATGGGGACAACAACTTCTAGTAATAACAACGGTATCATGCACATCAATGACCATCATCATCATCATCATCAGGATCTCATGACCATGTCCATGTGCATGGACAACTCATCCTCATCAACATCATCGTCTACCATGCATACTCATCACCATGCCATGGTCTTTGGGGATCCCTTTTCCATGGTAACCAACAACAACAATAATCATTATGAGATGGCGACCGGTGTAGCCGGTTTTCATGGCGCGATGGCCGGTGATCTGCCATTAGGAAATAGTTTTCATGGCGGCGATTATGGGGGGATGTTGGATGAAGAGAGTACTGATAAAATGGGGTTAGAAAGCGACTTGTCCCTTCCTCCATTAGAAAGTAGTATTAGAAGCACTGAAGAGATTATTATTATTAATAGCAACAATAATGCCTCCTCAATTGATGACATGAAAAGCCACAACAACCACTTCAATAATAATAATAATACTAATAATGATAGTTGCTTCAATAACACCGATAATCAGGTTCTGAATAACAACAACTGCTCCAATGAAGAGGATTTGTTTGGGTTTGGAAATCATGGCCAAGTGGAAAACTTAAGAATGGGAGAATGGGACTTTGAGGGTTTGATGCAAGACATTTCCTATTTTCCTTCCCTTGATTTCCAAGTTTGA 1092 0.4359 MVKEKSKNNGSKQRKGLWSPEEDEKLIRYMITKGEGCWSDIARNAGLERCGKSCRLRWINYLRPDLKRGAFSLQEEDLIIHLHSILGNRWSQIAARLPGRTDNEIKNFWNSTVKKRLKLNNNSTSSPNNTDSSEPNSIRDNNVVMGTTTSSNNNGIMHINDHHHHHHQDLMTMSMCMDNSSSSTSSSTMHTHHHAMVFGDPFSMVTNNNNNHYEMATGVAGFHGAMAGDLPLGNSFHGGDYGGMLDEESTDKMGLESDLSLPPLESSIRSTEEIIIINSNNNASSIDDMKSHNNHFNNNNNTNNDSCFNNTDNQVLNNNNCSNEEDLFGFGNHGQVENLRMGEWDFEGLMQDISYFPSLDFQV 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g02880 363 CDD SANT 18 62 IPR001005 -
Arst8g02880 363 ProSiteProfiles Myb-like domain profile. 10 62 IPR001005 -
Arst8g02880 363 PANTHER MYB DOMAIN PROTEIN 55 5 318 - -
Arst8g02880 363 Pfam Myb-like DNA-binding domain 15 62 IPR001005 -
Arst8g02880 363 Pfam Myb-like DNA-binding domain 68 111 IPR001005 -
Arst8g02880 363 FunFam MYB transcription factor 12 68 - -
Arst8g02880 363 FunFam Transcription factor MYB46 69 139 - -
Arst8g02880 363 MobiDBLite consensus disorder prediction 119 157 - -
Arst8g02880 363 SUPERFAMILY Homeodomain-like 14 109 IPR009057 -
Arst8g02880 363 Gene3D - 15 67 - -
Arst8g02880 363 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Arst8g02880 363 CDD SANT 70 113 IPR001005 -
Arst8g02880 363 Gene3D - 69 142 - -
Arst8g02880 363 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 62 IPR017930 -
Arst8g02880 363 MobiDBLite consensus disorder prediction 119 160 - -
Arst8g02880 363 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Arst8g02880 363 SMART sant 14 64 IPR001005 -
Arst8g02880 363 SMART sant 67 115 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g02880 Arst-Chr8 39359561 39366565 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g02880 8 363 MYB Transcription Factor Family AT3G08500 44.837 9.08e-82 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Arst8g02880 Myb_DNA-binding 6.7e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g02880 K09422 - gmx:100796379 327.02