Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g02870 ATGACAGACCCACATTATTCCAATCTATACGCTTCATCAGGAAGGTTCAACTTCATGCCCCTCCACCCTCATTACTTCCCTTCTTCCTCCTCCTCCTCCTCTTCTTCTTCTTTTATTTCTAATCAAAATTCCATTAATACTTCCCTCTTCTCATCACCATCGTATCCTCTCTATTTCTCAAACACCAGATTATTCTCCTTCCAATTGGAACCACCCTCTTCATCATCTTCTTCTCCTCCTCCTTCTTCCCCTCCTCTCATACAAGCCCTTCCTTTCATAAACACCAACAGCAGTGATCAAGAAGTAGTGGTGGACAAGATGAGAAAAGACAACAACAAAAAAGATGAAGAGAATCTTTTGGCTGATGATGATTATGATGATAACGAAGGTGTTGCCGTAGCGCTACGAATAGGGCTTCCTAATAGCGTGTCTGATAATACTTCCGGTATTGATGATCGGCAAAAGAAGAAGAAGATCTCATCAAACACAGAAGAAATTGTGGGAGAAAAAGATGAAGTGATGAGCGTGGTTTCTGAGCATCAGCCTTTGTTGTTAGAGAGATTGAACAATAACAAGACACAGTTTCAGTATTGGATTCCCACAGCTTCTCAGATTCTCATTGGTCCTACTCAGTTCTCATGCCCAGTCTGCTCCAAGACTTTCAACCGATACAATAATCTTCAGATGCATATGTGGGGACATGGATCTCAATACAGAAAGGGACCAGATTCTCTAAAAGGAACACAACCAACAGCAATGCTAAGGCTTCCATGCTTCTGTTGTGCGCCAGGTTGCAAGCACAATATAGACCACCCAAGAGCGAGGCCTCTCAAGGACTTCAGAACCCTCCAAACGCATTACAAGCGAAAGCACGGCGTAAAACCCTACGCTTGCCGGAAATGTGGCAAGCCGTTCGCCGTGAAAGGCGATTGGCGGACGCATGAGAAGAACTGCGGCAGGATCTGGTATTGTTTGTGTGGGTCTGATTTCAAGCATAAGAGGTCCCTGAAGGATCATGTCAAAGCCTTTGGCCATGGACATGGTGCTTTTGGTATTGATTGCATGCAAGAGGAGGATGAAGCAGCTTCCGAAGTTGAACATGATGGTGATTGCTCCTTGTAG 1122 0.4456 MTDPHYSNLYASSGRFNFMPLHPHYFPSSSSSSSSSSFISNQNSINTSLFSSPSYPLYFSNTRLFSFQLEPPSSSSSSPPPSSPPLIQALPFINTNSSDQEVVVDKMRKDNNKKDEENLLADDDYDDNEGVAVALRIGLPNSVSDNTSGIDDRQKKKKISSNTEEIVGEKDEVMSVVSEHQPLLLERLNNNKTQFQYWIPTASQILIGPTQFSCPVCSKTFNRYNNLQMHMWGHGSQYRKGPDSLKGTQPTAMLRLPCFCCAPGCKHNIDHPRARPLKDFRTLQTHYKRKHGVKPYACRKCGKPFAVKGDWRTHEKNCGRIWYCLCGSDFKHKRSLKDHVKAFGHGHGAFGIDCMQEEDEAASEVEHDGDCSL 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g02870 373 MobiDBLite consensus disorder prediction 69 90 - -
Arst8g02870 373 Pfam Zinc finger, C2H2 type 212 231 IPR013087 -
Arst8g02870 373 PANTHER ZINC FINGER PROTEIN WIP2 45 366 IPR043584 GO:0003700|GO:0010468
Arst8g02870 373 ProSitePatterns Zinc finger C2H2 type domain signature. 214 234 IPR013087 -
Arst8g02870 373 FunFam zinc finger protein WIP2-like 211 234 - -
Arst8g02870 373 SMART c2h2final6 296 316 IPR013087 -
Arst8g02870 373 SMART c2h2final6 212 234 IPR013087 -
Arst8g02870 373 SMART c2h2final6 322 345 IPR013087 -
Arst8g02870 373 ProSiteProfiles Zinc finger C2H2 type domain profile. 296 316 IPR013087 -
Arst8g02870 373 Gene3D Classic Zinc Finger 275 349 - -
Arst8g02870 373 SUPERFAMILY beta-beta-alpha zinc fingers 205 234 IPR036236 -
Arst8g02870 373 FunFam Zinc finger protein WIP2 265 347 - -
Arst8g02870 373 Gene3D Classic Zinc Finger 211 234 - -
Arst8g02870 373 ProSiteProfiles Zinc finger C2H2 type domain profile. 212 239 IPR013087 -
Arst8g02870 373 SUPERFAMILY beta-beta-alpha zinc fingers 281 316 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g02870 Arst-Chr8 39161214 39165949 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g02870 131 366 C2H2 Transcription Factor Family AT3G57670 64.567 1.91e-117 344
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Arst8g02870 zf-C2H2 0.00066 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g02870 - - gmx:100799060 439.113
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g02870 8 39161214 39165949 Arst8g02870 8 39161214 39165949 ECH