Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g02869 ATGTTGCATTCCCGTTTCTTCAAGGCTATACTCAAAACTAATCTTCAAAGGATTAAAATACCCAATAAGTTTTCAAGGAGACATGGAAGCGCTCTTTCAAATCCAGTGTTTCTTAAGCCTCCAGATGGCACTCTATGGAAAGTGTATTGGACAAAAAAGAATAGTGATGAAGTTTGGTTTGTAAAAGGATGGAAGGAATTTACCAAAAACTACTCTCTTAATGAAGGATATTTAGTTGTGTTTAAATATGAAGAAACTTCTCAGTTCGATGTAATCATACTTGAGACAAATGATCTAGAAATAGATTATTCCAAATATGAGACTGTGAATAGAAATGGCAAATGTGACCAGAGAGATGAGAAAACAGTTGGAATCTTAAAGGAAATCCCTGTAAAAAATAATGACGCTGGAAAAAGATTGACATTGTTTTCTCCTCAGCCTCATATGAAAGTCAGAGGTGAGAGCTCTACTCGAAGAAGAACATCATCTTTGAATTGGCCAAAGGAACTTAAAGCTCAGGAAATAGCTCAGAAATTCATCTCCTATAACCCTTTCTTCACACTGTTCATAAAGCCAAATTACCTCACAGAATACCAAGTGAATGTACCGACTTTGAAAGGTTACATTGAGGACAAGGTGAAGGACGTGGCGCTTAAGGTTGGGGAAAGACAATGGCAAGTAAAGTTGCTCCCTTGTCGCAGCTCGGCTCGCCGCCTCTCAGGTGGTTGGTCCTTGTTTGTCCATGAGAATGGGTTGCAAGCTGAAGATGTTTGTGTCTTTGAACTGATTAACATGGAAGATTCAGTTTTTAAGGTTCATGTTTTCAAAAGGTAG 834 0.3825 MLHSRFFKAILKTNLQRIKIPNKFSRRHGSALSNPVFLKPPDGTLWKVYWTKKNSDEVWFVKGWKEFTKNYSLNEGYLVVFKYEETSQFDVIILETNDLEIDYSKYETVNRNGKCDQRDEKTVGILKEIPVKNNDAGKRLTLFSPQPHMKVRGESSTRRRTSSLNWPKELKAQEIAQKFISYNPFFTLFIKPNYLTEYQVNVPTLKGYIEDKVKDVALKVGERQWQVKLLPCRSSARRLSGGWSLFVHENGLQAEDVCVFELINMEDSVFKVHVFKR 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g02869 277 ProSiteProfiles B3 DNA-binding domain profile. 3 97 IPR003340 GO:0003677
Arst8g02869 277 ProSiteProfiles B3 DNA-binding domain profile. 223 277 IPR003340 GO:0003677
Arst8g02869 277 CDD B3_DNA 5 94 IPR003340 GO:0003677
Arst8g02869 277 SMART B3_2 6 97 IPR003340 GO:0003677
Arst8g02869 277 SMART B3_2 185 276 IPR003340 GO:0003677
Arst8g02869 277 SUPERFAMILY DNA-binding pseudobarrel domain 5 104 IPR015300 -
Arst8g02869 277 CDD B3_DNA 185 276 IPR003340 GO:0003677
Arst8g02869 277 SUPERFAMILY DNA-binding pseudobarrel domain 183 276 IPR015300 -
Arst8g02869 277 PANTHER B3 DOMAIN-CONTAINING 5 273 - -
Arst8g02869 277 Pfam B3 DNA binding domain 197 277 IPR003340 GO:0003677
Arst8g02869 277 Pfam B3 DNA binding domain 13 90 IPR003340 GO:0003677
Arst8g02869 277 Gene3D - 164 277 IPR015300 -
Arst8g02869 277 Gene3D - 2 98 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g02869 Arst-Chr8 39154901 39157455 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g02869 6 276 B3 DNA Binding Superfamily AT3G18990 28.274 5.82e-29 111
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Arst8g02869 B3 1.3e-11 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g02869 - - lang:109346569 271.166