Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g02850 ATGGCAAAAGTAAGAGCAGGAACACTACTGCATGGTGTTCTTCACGTTACAATTTTTGAAGCTGACAATCTCTACGTGAATGACTGCTGTAATTGTTTCCCCAAGCTATCAGAAGAAACCTTCTCAAGTGGAAAAGTTGGTGGTTGTAGAATATACACAACCATTAATTTAGGCAGTACTATAGTGGGCAGGACTAGAAGTGTAAACCAAAATGAACACTTTAATTTTCAGTGGCATCAATCTTTAAGAATTTACACTGCTCATATTGCAAGTGAAGTTGTTTTTCATATCAAAGAAGACGACACAATAATTGGTGCAAAAGTGATTGGAAGAGCATATTTTCCTGTGGAAGAGTTGGTAAATGGAGAAAATAAGGATAGATGGCTCCAAATCTTGAATAAAAAACATAAACCTCTTAAAGCAAGGCCTAGAATCCATGTGAAATTACAGTTTTTTAATGTCACAAAGGACATTAACTGGTCTCAAGGGATCAAAAGTCTTGATTTTGCAGGGCTCACTCATTCATACTTTCCTCAGAGAAGTGGTTGTAGGGTCACACTTTACCAAGACACTCACATACCAACCACATTTTTTCCTGAAATCTTGCTAACTAAGGGTAGGTACTATGAACTGCATCAATGTTGGGAAGACATCTTTGATGCCATTTCGAAGGCGAAACAGTTGATTTACATAGCAGGATGGTCTCTTTGCACCAAAATCACCTTGGTTAGGGAATCAACTTGCAAGAAACAAGAAAGTAGTGATTTGAATTTGACACTTGGTGAGCTTCTTAAAAAGAAGGCCAGTGAAGGTGTTAAGGTCCTTATGCTCATTTGGGATGACAGAACTTCAATTAAGTGGCTAAGGAATGATGGAGTTATGACAACTCATGATGAAGACACAGAAAGTTATTTTGATGGAACTGGAGTGCACTGTGTTTTATGTCCTAGAAATCCTGACAAAGGGGAAAGCCTTATCCAAGGCACAGAGGTTGCTACCATGTTTACACATCATCAAAAGATCATAATCGTCGATAGTGATGTGCCAAATGAAAAATCAGATAGTAGGAGAAGAATTTTGAGTTTCATTGGTGGTATTGATCTATGTGATGGGAGATATGACACACCTTTCCATTCCATCTTTGGTAGCTTAGGAACAGTTCATCATAATGATTTTCGCCAGCCAAACTTCGAAGGAGCCTCGATCGATAAAGGCGGACCGAGAGAGCCTTGGCATGACATACATTGTCGCCTAGAAGGACCAATTGCAAGGGATGTTTTAAAGAATTTTGAGCAAAGGTGGAGAAAACAAGATAAATTCCCTGAAGATGATGAAGAAATATGGAATGTTCAGTTATTTCGATCAATTGATGGAGGAGCAGCTTTGGGCCTCCCAAATTCTGAAGAAGAAGTAGCAAGGTCAGGTCTTATGAATGAAAAAGAACATATCTTTGATTGCAGCATCCAAAATGCTTATATTACTGCTATCAGGAGAGCCAAGAGTTTTATCTATATAGAAAATCAGTATTTTATGGGAAGCTCTTTTGGCTGGAATTCTGGCAACCTTCAAGTTCAGGAGGTGGGAGCTTTGCATCTTATTCCGAAGGAATTGTCTCTCAAGATTGTCAGCAAGATTGAAGCAGGAGAAAGGTTTAGTGTATATGTAGTGATTCCAATGTGGCCAGAGGGTATTCCTGAGAGTAACTCAGTTCAAAGCATGTTGAGTTGGCAGAAGGAGACAATGGATATGATGTATATTGATATAATCCAAGCTCTACGTGCCAAAGGGATTACTGCTGACCCAAAAGACTATTTGAGTTTCTTTTGCCTTGCAAATCGTGAAAAGAAGAATGATGGAGAATATAAACCTTCTAAACACCCACAATATGACTCAGATTATAACAGAGCTCAACAAGCAAGGAGATTCATGATCTATGTACATGCTAAAATGATGATAGTTGATGATGAATACATAATTATTGGATCTGCCAATATCAATCAACGATCCATGGATGGAGCTAGAGATACAGAGATTGCCATGGGAGCTTATCAACCATATCACATAAAAAGAAATGAGCCAAACAGGGGCCAGATACATGGCTTTAGAATGGCCTTGTGGTACGAGCACTTGGGTTTTCTAGATGGCTCTTTTCTTGTTCCACAGAGTTTGGAGTGTGTCAGACTTATAAACAATATTTCAACAAAGTATTGGGACCTTTACTGTAGTGAAACCCTTGATGAAGACTTGCCTGGACATTTGCTTAGTTATCCCATTAAAGTAACAGAAAGTGGTAATGTCACAACGCATCTTGGTGTAGAGCACTTTCCGGACACAAAGGCACGAATTCTTGGGTCCAAATCGGAACTTCCTTTTCTCTTAACTACTTAA 2388 0.389 MAKVRAGTLLHGVLHVTIFEADNLYVNDCCNCFPKLSEETFSSGKVGGCRIYTTINLGSTIVGRTRSVNQNEHFNFQWHQSLRIYTAHIASEVVFHIKEDDTIIGAKVIGRAYFPVEELVNGENKDRWLQILNKKHKPLKARPRIHVKLQFFNVTKDINWSQGIKSLDFAGLTHSYFPQRSGCRVTLYQDTHIPTTFFPEILLTKGRYYELHQCWEDIFDAISKAKQLIYIAGWSLCTKITLVRESTCKKQESSDLNLTLGELLKKKASEGVKVLMLIWDDRTSIKWLRNDGVMTTHDEDTESYFDGTGVHCVLCPRNPDKGESLIQGTEVATMFTHHQKIIIVDSDVPNEKSDSRRRILSFIGGIDLCDGRYDTPFHSIFGSLGTVHHNDFRQPNFEGASIDKGGPREPWHDIHCRLEGPIARDVLKNFEQRWRKQDKFPEDDEEIWNVQLFRSIDGGAALGLPNSEEEVARSGLMNEKEHIFDCSIQNAYITAIRRAKSFIYIENQYFMGSSFGWNSGNLQVQEVGALHLIPKELSLKIVSKIEAGERFSVYVVIPMWPEGIPESNSVQSMLSWQKETMDMMYIDIIQALRAKGITADPKDYLSFFCLANREKKNDGEYKPSKHPQYDSDYNRAQQARRFMIYVHAKMMIVDDEYIIIGSANINQRSMDGARDTEIAMGAYQPYHIKRNEPNRGQIHGFRMALWYEHLGFLDGSFLVPQSLECVRLINNISTKYWDLYCSETLDEDLPGHLLSYPIKVTESGNVTTHLGVEHFPDTKARILGSKSELPFLLTT 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g02850 795 SMART C2_3c 13 128 IPR000008 -
Arst8g02850 795 SUPERFAMILY Phospholipase D/nuclease 487 725 - -
Arst8g02850 795 Pfam Phospholipase D Active site motif 643 669 IPR001736 GO:0003824
Arst8g02850 795 Pfam Phospholipase D Active site motif 333 372 IPR001736 GO:0003824
Arst8g02850 795 PIRSF PLD_plant 436 795 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Arst8g02850 795 PIRSF PLD_plant 1 441 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Arst8g02850 795 PIRSF PLD_plant 436 795 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Arst8g02850 795 PIRSF PLD_plant 1 441 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Arst8g02850 795 FunFam Phospholipase D delta 205 446 - -
Arst8g02850 795 Pfam C2 domain 12 130 IPR000008 -
Arst8g02850 795 Pfam Phospholipase D C terminal 716 786 IPR024632 -
Arst8g02850 795 Gene3D Endonuclease Chain A 204 451 - -
Arst8g02850 795 Gene3D Endonuclease Chain A 457 690 - -
Arst8g02850 795 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 642 669 IPR001736 GO:0003824
Arst8g02850 795 SMART pld_4 333 372 IPR001736 GO:0003824
Arst8g02850 795 SMART pld_4 642 669 IPR001736 GO:0003824
Arst8g02850 795 PANTHER PHOSPHOLIPASE D 8 785 IPR015679 -
Arst8g02850 795 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 333 372 IPR001736 GO:0003824
Arst8g02850 795 Gene3D C2 domain 9 163 IPR035892 -
Arst8g02850 795 ProSiteProfiles C2 domain profile. 1 129 IPR000008 -
Arst8g02850 795 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 9 154 IPR035892 -
Arst8g02850 795 SUPERFAMILY Phospholipase D/nuclease 155 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g02850 Arst-Chr8 38879206 38891355 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g02850 6 795 Phospholipase D Gene Family (Wang group) AT3G15730 60.000 0.0 1028
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g02850 K01115 - qsu:111988169 1088.56