Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g02841 ATGTCAGTAGATGCTGACAGAACTGTCAACCTGTGTAATAGTTTCCATGATACATGGAGCTTGCCTTTACAAATTGGAGTGGCACTTTATCTTTTATATACTCAAGTCAAATTTGCTTTTGTATCTGGATTAGCTATAACCATTTTACTGATACCAGTGAATAAATGGATATCACAATTAATTGCAATTGCCACTGAACAAATGATGAAGGAGAAGGATGAAAGGATTCGTAGAACAGGAGAACTTTTGACCTATATTCGCACTTTGAAGATGTATGGATGGGAACTTATTTTTTCTAGTTGGTTGATGGAGACAAGATCTTTGGAAGTGAAACACCTAGCTACTCGGAAGTACTTGGATGCATGGTGTGTATTCTTTTGGGCTACCACACCAACACTCTTTTCTATTTTCACATTTGGACTCTTCACACTGATGGGAAATCAACTTGATGCCGCAATGGTTTTCACTTGTCTTGCTTTGTTTAACACACTGATATCGCCATTGAATTCATTTCCATGGGTGATTAATGGATTGATTGATGCCTTTATATCCTCTAGAAGGTTGAGTAGATTTCTTTCTTGTCCTGAGCATAGATCCAATGTGGGAGACACCGGTTCCAGTTCATCATCTTTCTTGAGTAAACAACCTGATTCTTCACAAAGATTGGCTATCATTGTCCAAGATGTATCTTGTACCTGGTCAAGCAGTGATGAACCACCATTAAATATGGTGTTGAATCATGTGACTCTAAGCCTGTCCAAGGGTTCCTTTGTTGCTATTATTGGAGAGGTTGGTTCTGGTAAATCTTCCTTGTTATATTCAGTTCTTGGAGAAGCGCAACTTGCTCATGGATATATTTACTGTGATGGATCCGTGGCATATGTACCACAGGTCCCCTGGATTTTATCTGGTACTGTACGTGACAACATACTATTTGGGAAAAGCTATGATCCCGTAAGGTATAGAGATACACTACAGGCATGTGCATTAGATGTTGATATTGAATTGATGGTTGGACATGACATGGTGTATATTGGAGAGAAGGGACTAAATTTATCTGGTGGACAGAGAGCTCGACTTGCTTTGGCGAGCAGGGCAGTGTATGATGGCTCAGATGTTATTATGCTTGATGATGTTCTGAGTGCAGTTGATGCACAAGTTGCTCACTGGATTTTACACAATGCCATTCTTGGCCCTCTTATGCAAGGAAAAACTATATTGCTCTGTACTCACAATGTGCAGGCAATATCTTTAGCTGACGTGGTTGTTGTAATGGACAAGGGGCATGTAAAATGGTTGGGAAGTTCAGCTGCCTTTCCAATTTCTTCATACACAAGATTCTCCCCATCGAATGATCTTGATTTAACTTCAAAAAATCACAGAGAATCTTGCAGCTCAGATTCTTCATCCAAACCTAAGGAGCAATCTCTTCCTGAAAAAGAAATTGTGCATTCTCCGGAGATAGCAGAGGAGATAGTTGAAGTTGAGTTAAGGAAAGAGGGAAAAGTTGAAATTGGAGTGTATAAGAACTATGCTGTCTTCATTGGTCAGTTTGTTACAGTTGCTATATGCCTGTCAGCTATCTTCATGCAAGCATCTCGGAATGGAAATGATTTATGGCTATCATATTGGGTTGATACAACAGAAACTGGTCAAACAGCGCACTCTGTGTCCTTCTATCTGGCTATACTATGTCTATTTTGTGCTGTGAATTCTTTTTTCACATTGGTGAGGGCATTCTCTTTTGCGTTTGGTGGATTACAAGCAGCAATTAAGGTACACAATAGACTGCTTAGCAAGCTTATCAATGCACCTGTGCGATTCTTTGATCAGACCCCGGGTGGAAGAATACTGAACAGATTATCTTCAGATCTTTATACAATTGATGATTCTCTTCCATTCATTATGAACATTCTCCTGGCTAATTTTATAGGCCTGTTGGGCATTGCAATCATTTTGTCATATGTACAGGTCTTCTTCCTAGTCCTCCTATTGCCATTGTGGTATATCTACAGTAAACTACAGTTCTTCTACAGATCCACATCAAGAGAATTACGCCGATTGGACAGTGTTTCTCGTTCTCCAATATATACATCTTTCTCAGAAACACTTGATGGAACTTCAACTATAAGGGCTTTCAAATCCGAGGACTTTTTCTTTGCCAAATTTATTGAACACATCACATTGTATCAAAAGACTTCATACACAGAGACCGTAGCAAGTTTATGGCTTTCCTTGCGTCTTCAGTTATTAGGTGCATTTATCATCTCATTCATAGCTTTGATGGCTGTTGTTGGATCTCATAGAAGTCTGCCTATCAACTTTGGTACCCCAGGGCTGGTAGGATTGGCCCTCTCATATGCAGCTCCTATCGTATCCTTGTTGGGGAGTTTTTTAACAAGTTTCACTGAAACAGAAAAGGAGATGGTTTCAGTTGAAAGAGCACTTCAATACATGGACATTCCTCAAGAAGAACAAGGTGGATGCTTAAATGTGAATCCAGATTGGCCTAACCTAGGAGTTATTGAATTCCAGAATGTCACTTTGAAATATATGCCATCTTTGGCACCTGCAATCTGCAATCTTAGTTTTACTATTGCTGGAGGGACACAGGTTGGAATAATTGGAAGAACAGGTGCTGGAAAGTCTAGTGTGTTAAATGCCCTTTTCCGCCTGACCCCAATATATTCAGGCTCCATTTTAGTTGATGGCATGGACATTAAAAATGTTCCTGTCAGAGAACTGCGTACACATTTGGCTATTGTGCCTCAGAGTCCGTTCTTGTTCAATGGATCATTAAGGGAGAACCTAGATCCATTTAAGATGAGTGACGACTTAAAAATTTGGGATGCTTTGGAGAAGTGCCATGTGAAAGAGGAAGTAGAAGAAGCTGGAGGGCTGGATATTCTTGTAAAGGAAGGAGGTATATCGTTTTCCGTTGGCCAGAGGCAGCTTCTTTGCCTTGCACGTGCGCTTCTTAAATCTTCAAAAGTTCTCTGTTTGGATGAATGCACTGCCAATGTGGACATTCAAACTGCTTCGCTGCTCCACACCACCATATCCAGCAAGTGCAAAGGCATGACAGTGATCACAATTGCTCACAGGATTTCAACTGTCTTAAATATGGATAGCATTCTAATTTTAGACCATGGCAACCTGGCTGAACAAGGAAATCCAAAGGTTCTTCTGAATGATGAGTCCTCATTATTTTCCAGTTTTGTTAAAGCTTCATCAATGTAA 3240 0.4009 MSVDADRTVNLCNSFHDTWSLPLQIGVALYLLYTQVKFAFVSGLAITILLIPVNKWISQLIAIATEQMMKEKDERIRRTGELLTYIRTLKMYGWELIFSSWLMETRSLEVKHLATRKYLDAWCVFFWATTPTLFSIFTFGLFTLMGNQLDAAMVFTCLALFNTLISPLNSFPWVINGLIDAFISSRRLSRFLSCPEHRSNVGDTGSSSSSFLSKQPDSSQRLAIIVQDVSCTWSSSDEPPLNMVLNHVTLSLSKGSFVAIIGEVGSGKSSLLYSVLGEAQLAHGYIYCDGSVAYVPQVPWILSGTVRDNILFGKSYDPVRYRDTLQACALDVDIELMVGHDMVYIGEKGLNLSGGQRARLALASRAVYDGSDVIMLDDVLSAVDAQVAHWILHNAILGPLMQGKTILLCTHNVQAISLADVVVVMDKGHVKWLGSSAAFPISSYTRFSPSNDLDLTSKNHRESCSSDSSSKPKEQSLPEKEIVHSPEIAEEIVEVELRKEGKVEIGVYKNYAVFIGQFVTVAICLSAIFMQASRNGNDLWLSYWVDTTETGQTAHSVSFYLAILCLFCAVNSFFTLVRAFSFAFGGLQAAIKVHNRLLSKLINAPVRFFDQTPGGRILNRLSSDLYTIDDSLPFIMNILLANFIGLLGIAIILSYVQVFFLVLLLPLWYIYSKLQFFYRSTSRELRRLDSVSRSPIYTSFSETLDGTSTIRAFKSEDFFFAKFIEHITLYQKTSYTETVASLWLSLRLQLLGAFIISFIALMAVVGSHRSLPINFGTPGLVGLALSYAAPIVSLLGSFLTSFTETEKEMVSVERALQYMDIPQEEQGGCLNVNPDWPNLGVIEFQNVTLKYMPSLAPAICNLSFTIAGGTQVGIIGRTGAGKSSVLNALFRLTPIYSGSILVDGMDIKNVPVRELRTHLAIVPQSPFLFNGSLRENLDPFKMSDDLKIWDALEKCHVKEEVEEAGGLDILVKEGGISFSVGQRQLLCLARALLKSSKVLCLDECTANVDIQTASLLHTTISSKCKGMTVITIAHRISTVLNMDSILILDHGNLAEQGNPKVLLNDESSLFSSFVKASSM 1079
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g02841 1079 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 1 1077 - -
Arst8g02841 1079 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 1 1077 - -
Arst8g02841 1079 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 224 452 IPR003439 GO:0005524
Arst8g02841 1079 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 836 1067 IPR027417 -
Arst8g02841 1079 FunFam ATP-binding cassette (ABC) transporter, putative 829 1076 - -
Arst8g02841 1079 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 221 437 IPR027417 -
Arst8g02841 1079 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 521 807 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst8g02841 1079 CDD ABC_6TM_MRP7_D2_like 520 819 - -
Arst8g02841 1079 CDD ABCC_MRP_domain1 224 428 - -
Arst8g02841 1079 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 842 1075 IPR003439 GO:0005524
Arst8g02841 1079 Pfam ABC transporter 245 378 IPR003439 GO:0005524
Arst8g02841 1079 CDD ABC_6TM_MRP7_D1_like 1 188 - -
Arst8g02841 1079 SUPERFAMILY ABC transporter transmembrane region 521 824 IPR036640 GO:0005524|GO:0016020
Arst8g02841 1079 SUPERFAMILY ABC transporter transmembrane region 13 196 IPR036640 GO:0005524|GO:0016020
Arst8g02841 1079 FunFam ABC transporter C family member 5 485 825 - -
Arst8g02841 1079 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 1 180 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst8g02841 1079 FunFam ABC transporter C family member 13 206 462 - -
Arst8g02841 1079 Gene3D ABC transporter type 1, transmembrane domain 498 826 IPR036640 GO:0005524|GO:0016020
Arst8g02841 1079 Gene3D ABC transporter type 1, transmembrane domain 1 197 IPR036640 GO:0005524|GO:0016020
Arst8g02841 1079 Gene3D - 199 453 IPR027417 -
Arst8g02841 1079 Pfam ABC transporter transmembrane region 522 773 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst8g02841 1079 Pfam ABC transporter transmembrane region 4 168 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst8g02841 1079 FunFam ATP-binding cassette subfamily C member 10 1 197 - -
Arst8g02841 1079 SMART AAA_5 868 1052 IPR003593 GO:0016887
Arst8g02841 1079 SMART AAA_5 254 429 IPR003593 GO:0016887
Arst8g02841 1079 ProSitePatterns ABC transporters family signature. 978 992 IPR017871 GO:0005524|GO:0016887
Arst8g02841 1079 CDD ABCC_MRP_domain2 840 1059 - -
Arst8g02841 1079 MobiDBLite consensus disorder prediction 455 480 - -
Arst8g02841 1079 Gene3D - 827 1077 IPR027417 -
Arst8g02841 1079 Pfam ABC transporter 861 1006 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g02841 Arst-Chr8 38794821 38804066 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g02841 240 474 Calmodulin-binding Proteins AT2G36910 27.237 1.41e-16 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g02841 K05674 - gmx:100814181 1762.27