Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g02840 ATGTTATTATTGGTTTGCACATTCCATGATTTCGCTGATGATCATGATTTTCTAGTACTAATATATATATATTTCATGTGTTTCAAGTGTCTACGTGTGAACCTAGCAGAGCGTTCAAAATTCACAAATGGAGAAATTCAGACATTTATGTCAGTAGATGCTGACAGAACTGTCAACCTGTGTAATAGTTTCCATGATACATGGAGCTTGCCTTTACAAATTGGAGTGGCACTTTATCTTTTATATACTCAAGTCAAATTTGCTTTTGTATCTGGATTAGCTATAACCATTTTACTGATACCAGTGAATAAATGGATATCACAATTAATTGCAATTGCCACTGAACAAATGATGAAGGAGAAGGATGAAAGGATTCGTAGAACAGGAGAACTTTTGACCTATATTCGCACTTTGAAGATGTATGGATGGGAACTTATTTTTTCTAGTTGGTTGATGGAGACAAGATCTTTGGAAGTGAAACACCTAGCTACTCGGAAGTACTTGGATGCATGGTGTGTATTCTTTTGGGCTACCACACCAACACTCTTTTCTATTTTCACATTTGGACTCTTCACACTGATGGGAAATCAACTTGATGCCGCAATGGTTTTCACTTGTCTTGCTTTGTTTAACACACTGATATCGCCATTGAATTCATTTCCATGGGTGATTAATGGATTGATTGATGCCTTTATATCCTCTAGAAGGTTGAGTAGATTTCTTTCTTGTCCTGAGCATAGATCCAATGTGGGAGACACCGGTTCCAGTTCATCATCTTTCTTGAGTAAACAACCTGATTCTTCACAAAGATTGGCTATCATTGTCCAAGATGTATCTTGTACCTGGTCAAGCAGTGATGAACCACCATTAAATATGGTGTTGAATCATGTGACTCTAAGCCTGTCCAAGGGTTCCTTTGTTGCTATTATTGGAGAGGTTGGTTCTGGTAAATCTTCCTTGTTATATTCAGTTCTTGGAGAAGCGCAACTTGCTCATGGATATATTTACTGTGATGGATCCGTGGCATATGTACCACAGGTCCCCTGGATTTTATCTGGTACTGTACGTGACAACATACTATTTGGGAAAAGCTATGATCCCGTAAGGTATAGAGATACACTACAGGCATGTGCATTAGATGTTGATATTGAATTGATGGTTGGACATGACATGGTGTATATTGGAGAGAAGGGACTAAATTTATCTGGTGGACAGAGAGCTCGACTTGCTTTGGCGAGCAGGGCAGTGTATGATGGCTCAGATGTTATTATGCTTGATGATGTTCTGAGTGCAGTTGATGCACAAGTTGCTCACTGGATTTTACACAATGCCATTCTTGGCCCTCTTATGCAAGGAAAAACTATATTGCTCTGTACTCACAATGTGCAGGCAATATCTTTAGCTGACGTGGTTGTTGTAATGGACAAGGGGCATGTAAAATGGTTGGGAAGTTCAGCTGCCTTTCCAATTTCTTCATACACAAGATTCTCCCCATCGAATGATCTTGATTTAACTTCAAAAAATCACAGAGAATCTTGCAGCTCAGATTCTTCATCCAAACCTAAGGAGCAATCTCTTCCTGAAAAAGAAATTGTGCATTCTCCGGAGATAGCAGAGGAGATAGTTGAAGTTGAGTTAAGGAAAGAGGGAAAAGTTGAAATTGGAGTGTATAAGAACTATGCTGTCTTCATTGGTCAGTTTGTTACAGTTGCTATATGCCTGTCAGCTATCTTCATGCAAGCATCTCGGAATGGAAATGATTTATGGCTATCATATTGGGTTGATACAACAGAAACTGGTCAAACAGCGCACTCTGTGTCCTTCTATCTGGCTATACTATGTCTATTTTGTGCTGTGAATTCTTTTTTCACATTGGTGAGGGCATTCTCTTTTGCGTTTGGTGGATTACAAGCAGCAATTAAGGTACACAATAGACTGCTTAGCAAGCTTATCAATGCACCTGTGCGATTCTTTGATCAGACCCCGGGTGGAAGAATACTGAACAGATTATCTTCAGATCTTTATACAATTGATGATTCTCTTCCATTCATTATGAACATTCTCCTGGCTAATTTTATAGGCCTGTTGGGCATTGCAATCATTTTGTCATATGTACAGGTCTTCTTCCTAGTCCTCCTATTGCCATTGTGGTATATCTACAGTAAACTACAGTTCTTCTACAGATCCACATCAAGAGAATTACGCCGATTGGACAGTGTTTCTCGTTCTCCAATATATACATCTTTCTCAGAAACACTTGATGGAACTTCAACTATAAGGGCTTTCAAATCCGAGGACTTTTTCTTTGCCAAATTTATTGAACACATCACATTGTATCAAAAGACTTCATACACAGAGACCGTAGCAAGTTTATGGCTTTCCTTGCGTCTTCAGTTATTAGGTGCATTTATCATCTCATTCATAGCTTTGATGGCTGTTGTTGGATCTCATAGAAGTCTGCCTATCAACTTTGGTACCCCAGGGCTGGTAGGATTGGCCCTCTCATATGCAGCTCCTATCGTATCCTTGTTGGGGAGTTTTTTAACAAGTTTCACTGAAACAGAAAAGGAGATGGTTTCAGTTGAAAGAGCACTTCAATACATGGACATTCCTCAAGAAGAACAAGGTGGATGCTTAAATGTGAATCCAGATTGGCCTAACCTAGGAGTTATTGAATTCCAGAATGTCACTTTGAAATATATGCCATCTTTGGCACCTGCAATCTGCAATCTTAGTTTTACTATTGCTGGAGGGACACAGGTTGGAATAATTGGAAGAACAGGTGCTGGAAAGTCTAGTGTGTTAAATGCCCTTTTCCGCCTGACCCCAATATATTCAGGCTCCATTTTAGTTGATGGCATGGACATTAAAAATGTTCCTGTCAGAGAACTGCGTACACATTTGGCTATTGTGCCTCAGAGTCCGTTCTTGTTCAATGGATCATTAAGGGAGAACCTAGATCCATTTAAGATGAGTGACGACTTAAAAATTTGGGATGCTTTGGAGAAGTGCCATGTGAAAGAGGAAGTAGAAGAAGCTGGAGGGCTGGATATTCTTGTAAAGGAAGGAGGTATATCGTTTTCCGTTGGCCAGAGGCAGCTTCTTTGCCTTGCACGTGCGCTTCTTAAATCTTCAAAAGTTCTCTGTTTGGATGAATGCACTGCCAATGTGGACATTCAAACTGCTTCGCTGCTCCACACCACCATATCCAGCAAGTGCAAAGGCATGACAGTGATCACAATTGCTCACAGGATTTCAACTGTCTTAAATATGGATAGCATTCTAATTTTAGACCATGGCAACCTGGCTGAACAAGGAAATCCAAAGGTTCTTCTGAATGATGAGTCCTCATTATTTTCCAGTTTTGTTAAAGCTTCATCAATGTAA 3387 0.3974 MLLLVCTFHDFADDHDFLVLIYIYFMCFKCLRVNLAERSKFTNGEIQTFMSVDADRTVNLCNSFHDTWSLPLQIGVALYLLYTQVKFAFVSGLAITILLIPVNKWISQLIAIATEQMMKEKDERIRRTGELLTYIRTLKMYGWELIFSSWLMETRSLEVKHLATRKYLDAWCVFFWATTPTLFSIFTFGLFTLMGNQLDAAMVFTCLALFNTLISPLNSFPWVINGLIDAFISSRRLSRFLSCPEHRSNVGDTGSSSSSFLSKQPDSSQRLAIIVQDVSCTWSSSDEPPLNMVLNHVTLSLSKGSFVAIIGEVGSGKSSLLYSVLGEAQLAHGYIYCDGSVAYVPQVPWILSGTVRDNILFGKSYDPVRYRDTLQACALDVDIELMVGHDMVYIGEKGLNLSGGQRARLALASRAVYDGSDVIMLDDVLSAVDAQVAHWILHNAILGPLMQGKTILLCTHNVQAISLADVVVVMDKGHVKWLGSSAAFPISSYTRFSPSNDLDLTSKNHRESCSSDSSSKPKEQSLPEKEIVHSPEIAEEIVEVELRKEGKVEIGVYKNYAVFIGQFVTVAICLSAIFMQASRNGNDLWLSYWVDTTETGQTAHSVSFYLAILCLFCAVNSFFTLVRAFSFAFGGLQAAIKVHNRLLSKLINAPVRFFDQTPGGRILNRLSSDLYTIDDSLPFIMNILLANFIGLLGIAIILSYVQVFFLVLLLPLWYIYSKLQFFYRSTSRELRRLDSVSRSPIYTSFSETLDGTSTIRAFKSEDFFFAKFIEHITLYQKTSYTETVASLWLSLRLQLLGAFIISFIALMAVVGSHRSLPINFGTPGLVGLALSYAAPIVSLLGSFLTSFTETEKEMVSVERALQYMDIPQEEQGGCLNVNPDWPNLGVIEFQNVTLKYMPSLAPAICNLSFTIAGGTQVGIIGRTGAGKSSVLNALFRLTPIYSGSILVDGMDIKNVPVRELRTHLAIVPQSPFLFNGSLRENLDPFKMSDDLKIWDALEKCHVKEEVEEAGGLDILVKEGGISFSVGQRQLLCLARALLKSSKVLCLDECTANVDIQTASLLHTTISSKCKGMTVITIAHRISTVLNMDSILILDHGNLAEQGNPKVLLNDESSLFSSFVKASSM 1128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g02840 1128 CDD ABC_6TM_MRP7_D1_like 29 237 - -
Arst8g02840 1128 FunFam ABC transporter C family member 13 255 511 - -
Arst8g02840 1128 FunFam ATP-binding cassette subfamily C member 10 18 246 - -
Arst8g02840 1128 SMART AAA_5 303 478 IPR003593 GO:0016887
Arst8g02840 1128 SMART AAA_5 917 1101 IPR003593 GO:0016887
Arst8g02840 1128 SUPERFAMILY ABC transporter transmembrane region 570 873 IPR036640 GO:0005524|GO:0016020
Arst8g02840 1128 MobiDBLite consensus disorder prediction 504 529 - -
Arst8g02840 1128 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 891 1124 IPR003439 GO:0005524
Arst8g02840 1128 CDD ABCC_MRP_domain2 889 1108 - -
Arst8g02840 1128 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 885 1116 IPR027417 -
Arst8g02840 1128 CDD ABC_6TM_MRP7_D2_like 569 868 - -
Arst8g02840 1128 Gene3D - 248 502 IPR027417 -
Arst8g02840 1128 Pfam ABC transporter 910 1055 IPR003439 GO:0005524
Arst8g02840 1128 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 570 856 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst8g02840 1128 ProSitePatterns ABC transporters family signature. 1027 1041 IPR017871 GO:0005524|GO:0016887
Arst8g02840 1128 CDD ABCC_MRP_domain1 273 477 - -
Arst8g02840 1128 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 273 501 IPR003439 GO:0005524
Arst8g02840 1128 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 29 229 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst8g02840 1128 Pfam ABC transporter transmembrane region 29 217 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst8g02840 1128 Pfam ABC transporter transmembrane region 571 822 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst8g02840 1128 Gene3D - 876 1126 IPR027417 -
Arst8g02840 1128 FunFam ATP-binding cassette (ABC) transporter, putative 878 1125 - -
Arst8g02840 1128 Pfam ABC transporter 294 427 IPR003439 GO:0005524
Arst8g02840 1128 SUPERFAMILY ABC transporter transmembrane region 29 245 IPR036640 GO:0005524|GO:0016020
Arst8g02840 1128 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 270 486 IPR027417 -
Arst8g02840 1128 FunFam ABC transporter C family member 5 534 874 - -
Arst8g02840 1128 Gene3D ABC transporter type 1, transmembrane domain 18 246 IPR036640 GO:0005524|GO:0016020
Arst8g02840 1128 Gene3D ABC transporter type 1, transmembrane domain 547 875 IPR036640 GO:0005524|GO:0016020
Arst8g02840 1128 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 26 1126 - -
Arst8g02840 1128 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 26 1126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g02840 Arst-Chr8 38794821 38805062 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g02840 289 523 Calmodulin-binding Proteins AT2G36910 27.237 1.69e-16 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g02840 K05674 - gmx:100814181 1803.88