Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g02838 ATGACTTTAATATATGACAAGTGTCTACGTGTGAACCTAGCAGAGCGTTCAAAATTCACAAATGGAGAAATTCAGACATTTATGTCAGTAGATGCTGACAGAACTGTCAACCTGTGTAATAGTTTCCATGATACATGGAGCTTGCCTTTACAAATTGGAGTGGCACTTTATCTTTTATATACTCAAGTCAAATTTGCTTTTGTATCTGGATTAGCTATAACCATTTTACTGATACCAGTGAATAAATGGATATCACAATTAATTGCAATTGCCACTGAACAAATGATGAAGGAGAAGGATGAAAGGATTCGTAGAACAGGAGAACTTTTGACCTATATTCGCACTTTGAAGATGTATGGATGGGAACTTATTTTTTCTAGTTGGTTGATGGAGACAAGATCTTTGGAAGTGAAACACCTAGCTACTCGGAAGTACTTGGATGCATGGTGTGTATTCTTTTGGGCTACCACACCAACACTCTTTTCTATTTTCACATTTGGACTCTTCACACTGATGGGAAATCAACTTGATGCCGCAATGGTTTTCACTTGTCTTGCTTTGTTTAACACACTGATATCGCCATTGAATTCATTTCCATGGGTGATTAATGGATTGATTGATGCCTTTATATCCTCTAGAAGGTTGAGTAGATTTCTTTCTTGTCCTGAGCATAGATCCAATGTGGGAGACACCGGTTCCAGTTCATCATCTTTCTTGAGTAAACAACCTGATTCTTCACAAAGATTGGCTATCATTGTCCAAGATGTATCTTGTACCTGGTCAAGCAGTGATGAACCACCATTAAATATGGTGTTGAATCATGTGACTCTAAGCCTGTCCAAGGGTTCCTTTGTTGCTATTATTGGAGAGGTTGGTTCTGGTAAATCTTCCTTGTTATATTCAGTTCTTGGAGAAGCGCAACTTGCTCATGGATATATTTACTGTGATGGATCCGTGGCATATGTACCACAGGTCCCCTGGATTTTATCTGGTACTGTACGTGACAACATACTATTTGGGAAAAGCTATGATCCCGTAAGGTATAGAGATACACTACAGGCATGTGCATTAGATGTTGATATTGAATTGATGGTTGGACATGACATGGTGTATATTGGAGAGAAGGGACTAAATTTATCTGGTGGACAGAGAGCTCGACTTGCTTTGGCGAGCAGGGCAGTGTATGATGGCTCAGATGTTATTATGCTTGATGATGTTCTGAGTGCAGTTGATGCACAAGTTGCTCACTGGATTTTACACAATGCCATTCTTGGCCCTCTTATGCAAGGAAAAACTATATTGCTCTGTACTCACAATGTGCAGGCAATATCTTTAGCTGACGTGGTTGTTGTAATGGACAAGGGGCATGTAAAATGGTTGGGAAGTTCAGCTGCCTTTCCAATTTCTTCATACACAAGATTCTCCCCATCGAATGATCTTGATTTAACTTCAAAAAATCACAGAGAATCTTGCAGCTCAGATTCTTCATCCAAACCTAAGGAGCAATCTCTTCCTGAAAAAGAAATTGTGCATTCTCCGGAGATAGCAGAGGAGATAGTTGAAGTTGAGTTAAGGAAAGAGGGAAAAGTTGAAATTGGAGTGTATAAGAACTATGCTGTCTTCATTGGTCAGTTTGTTACAGTTGCTATATGCCTGTCAGCTATCTTCATGCAAGCATCTCGGAATGGAAATGATTTATGGCTATCATATTGGGTTGATACAACAGAAACTGGTCAAACAGCGCACTCTGTGTCCTTCTATCTGGCTATACTATGTCTATTTTGTGCTGTGAATTCTTTTTTCACATTGGTGAGGGCATTCTCTTTTGCGTTTGGTGGATTACAAGCAGCAATTAAGGTACACAATAGACTGCTTAGCAAGCTTATCAATGCACCTGTGCGATTCTTTGATCAGACCCCGGGTGGAAGAATACTGAACAGATTATCTTCAGATCTTTATACAATTGATGATTCTCTTCCATTCATTATGAACATTCTCCTGGCTAATTTTATAGGCCTGTTGGGCATTGCAATCATTTTGTCATATGTACAGGTCTTCTTCCTAGTCCTCCTATTGCCATTGTGGTATATCTACAGTAAACTACAGTTCTTCTACAGATCCACATCAAGAGAATTACGCCGATTGGACAGTGTTTCTCGTTCTCCAATATATACATCTTTCTCAGAAACACTTGATGGAACTTCAACTATAAGGGCTTTCAAATCCGAGGACTTTTTCTTTGCCAAATTTATTGAACACATCACATTGTATCAAAAGACTTCATACACAGAGACCGTAGCAAGTTTATGGCTTTCCTTGCGTCTTCAGTTATTAGGTGCATTTATCATCTCATTCATAGCTTTGATGGCTGTTGTTGGATCTCATAGAAGTCTGCCTATCAACTTTGGTACCCCAGGGCTGGTAGGATTGGCCCTCTCATATGCAGCTCCTATCGTATCCTTGTTGGGGAGTTTTTTAACAAGTTTCACTGAAACAGAAAAGGAGATGGTTTCAGTTGAAAGAGCACTTCAATACATGGACATTCCTCAAGAAGAACAAGGTGGATGCTTAAATGTGAATCCAGATTGGCCTAACCTAGGAGTTATTGAATTCCAGAATGTCACTTTGAAATATATGCCATCTTTGGCACCTGCAATCTGCAATCTTAGTTTTACTATTGCTGGAGGGACACAGGTTGGAATAATTGGAAGAACAGGTGCTGGAAAGTCTAGTGTGTTAAATGCCCTTTTCCGCCTGACCCCAATATATTCAGGCTCCATTTTAGTTGATGGCATGGACATTAAAAATGTTCCTGTCAGAGAACTGCGTACACATTTGGCTATTGTGCCTCAGAGTCCGTTCTTGTTCAATGGATCATTAAGGGAGAACCTAGATCCATTTAAGATGAGTGACGACTTAAAAATTTGGGATGCTTTGGAGAAGTGCCATGTGAAAGAGGAAGTAGAAGAAGCTGGAGGGCTGGATATTCTTGTAAAGGAAGGAGGTATATCGTTTTCCGTTGGCCAGAGGCAGCTTCTTTGCCTTGCACGTGCGCTTCTTAAATCTTCAAAAGTTCTCTGTTTGGATGAATGCACTGCCAATGTGGACATTCAAACTGCTTCGCTGCTCCACACCACCATATCCAGCAAGTGCAAAGGCATGACAGTGATCACAATTGCTCACAGGATTTCAACTGTCTTAAATATGGATAGCATTCTAATTTTAGACCATGGCAACCTGGCTGAACAAGGAAATCCAAAGGTTCTTCTGAATGATGAGTCCTCATTATTTTCCAGTTTTGTTAAAGCTTCATCAATGTAA 3321 0.3996 MTLIYDKCLRVNLAERSKFTNGEIQTFMSVDADRTVNLCNSFHDTWSLPLQIGVALYLLYTQVKFAFVSGLAITILLIPVNKWISQLIAIATEQMMKEKDERIRRTGELLTYIRTLKMYGWELIFSSWLMETRSLEVKHLATRKYLDAWCVFFWATTPTLFSIFTFGLFTLMGNQLDAAMVFTCLALFNTLISPLNSFPWVINGLIDAFISSRRLSRFLSCPEHRSNVGDTGSSSSSFLSKQPDSSQRLAIIVQDVSCTWSSSDEPPLNMVLNHVTLSLSKGSFVAIIGEVGSGKSSLLYSVLGEAQLAHGYIYCDGSVAYVPQVPWILSGTVRDNILFGKSYDPVRYRDTLQACALDVDIELMVGHDMVYIGEKGLNLSGGQRARLALASRAVYDGSDVIMLDDVLSAVDAQVAHWILHNAILGPLMQGKTILLCTHNVQAISLADVVVVMDKGHVKWLGSSAAFPISSYTRFSPSNDLDLTSKNHRESCSSDSSSKPKEQSLPEKEIVHSPEIAEEIVEVELRKEGKVEIGVYKNYAVFIGQFVTVAICLSAIFMQASRNGNDLWLSYWVDTTETGQTAHSVSFYLAILCLFCAVNSFFTLVRAFSFAFGGLQAAIKVHNRLLSKLINAPVRFFDQTPGGRILNRLSSDLYTIDDSLPFIMNILLANFIGLLGIAIILSYVQVFFLVLLLPLWYIYSKLQFFYRSTSRELRRLDSVSRSPIYTSFSETLDGTSTIRAFKSEDFFFAKFIEHITLYQKTSYTETVASLWLSLRLQLLGAFIISFIALMAVVGSHRSLPINFGTPGLVGLALSYAAPIVSLLGSFLTSFTETEKEMVSVERALQYMDIPQEEQGGCLNVNPDWPNLGVIEFQNVTLKYMPSLAPAICNLSFTIAGGTQVGIIGRTGAGKSSVLNALFRLTPIYSGSILVDGMDIKNVPVRELRTHLAIVPQSPFLFNGSLRENLDPFKMSDDLKIWDALEKCHVKEEVEEAGGLDILVKEGGISFSVGQRQLLCLARALLKSSKVLCLDECTANVDIQTASLLHTTISSKCKGMTVITIAHRISTVLNMDSILILDHGNLAEQGNPKVLLNDESSLFSSFVKASSM 1106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g02838 1106 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 1 1104 - -
Arst8g02838 1106 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 1 1104 - -
Arst8g02838 1106 CDD ABCC_MRP_domain1 251 455 - -
Arst8g02838 1106 FunFam ABC transporter C family member 13 233 489 - -
Arst8g02838 1106 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 863 1094 IPR027417 -
Arst8g02838 1106 MobiDBLite consensus disorder prediction 482 507 - -
Arst8g02838 1106 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 548 834 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst8g02838 1106 CDD ABC_6TM_MRP7_D2_like 547 846 - -
Arst8g02838 1106 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 1 207 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst8g02838 1106 Pfam ABC transporter 272 405 IPR003439 GO:0005524
Arst8g02838 1106 SMART AAA_5 281 456 IPR003593 GO:0016887
Arst8g02838 1106 SMART AAA_5 895 1079 IPR003593 GO:0016887
Arst8g02838 1106 FunFam ATP-binding cassette (ABC) transporter, putative 856 1103 - -
Arst8g02838 1106 Gene3D - 226 480 IPR027417 -
Arst8g02838 1106 Gene3D - 854 1104 IPR027417 -
Arst8g02838 1106 FunFam ATP-binding cassette subfamily C member 10 1 224 - -
Arst8g02838 1106 CDD ABCC_MRP_domain2 867 1086 - -
Arst8g02838 1106 Gene3D ABC transporter type 1, transmembrane domain 525 853 IPR036640 GO:0005524|GO:0016020
Arst8g02838 1106 Gene3D ABC transporter type 1, transmembrane domain 1 224 IPR036640 GO:0005524|GO:0016020
Arst8g02838 1106 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 869 1102 IPR003439 GO:0005524
Arst8g02838 1106 SUPERFAMILY ABC transporter transmembrane region 548 851 IPR036640 GO:0005524|GO:0016020
Arst8g02838 1106 Pfam ABC transporter 888 1033 IPR003439 GO:0005524
Arst8g02838 1106 ProSitePatterns ABC transporters family signature. 1005 1019 IPR017871 GO:0005524|GO:0016887
Arst8g02838 1106 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 251 479 IPR003439 GO:0005524
Arst8g02838 1106 CDD ABC_6TM_MRP7_D1_like 1 215 - -
Arst8g02838 1106 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 248 464 IPR027417 -
Arst8g02838 1106 Pfam ABC transporter transmembrane region 549 800 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst8g02838 1106 Pfam ABC transporter transmembrane region 3 195 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst8g02838 1106 FunFam ABC transporter C family member 5 512 852 - -
Arst8g02838 1106 SUPERFAMILY ABC transporter transmembrane region 3 223 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g02838 Arst-Chr8 38794821 38805062 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g02838 267 501 Calmodulin-binding Proteins AT2G36910 27.237 1.75e-16 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g02838 K05674 - gmx:100814181 1814.28