Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g02837 ATGCTGACAGAACTGTCAACCTGTGTAATAGTTTCCATGATACATGGAGTGAATAAATGGATATCACAATTAATTGCAATTGCCACTGAACAAATGATGAAGGAGAAGGATGAAAGGATTCGTAGAACAGGAGAACTTTTGACCTATATTCGCACTTTGAAGATGTATGGATGGGAACTTATTTTTTCTAGTTGGTTGATGGAGACAAGATCTTTGGAAGTGAAACACCTAGCTACTCGGAAGTACTTGGATGCATGGTGTGTATTCTTTTGGGCTACCACACCAACACTCTTTTCTATTTTCACATTTGGACTCTTCACACTGATGGGAAATCAACTTGATGCCGCAATGGTTTTCACTTGTCTTGCTTTGTTTAACACACTGATATCGCCATTGAATTCATTTCCATGGGTGATTAATGGATTGATTGATGCCTTTATATCCTCTAGAAGGTTGAGTAGATTTCTTTCTTGTCCTGAGCATAGATCCAATGTGGGAGACACCGGTTCCAGTTCATCATCTTTCTTGAGTAAACAACCTGATTCTTCACAAAGATTGGCTATCATTGTCCAAGATGTATCTTGTACCTGGTCAAGCAGTGATGAACCACCATTAAATATGGTGTTGAATCATGTGACTCTAAGCCTGTCCAAGGGTTCCTTTGTTGCTATTATTGGAGAGGTTGGTTCTGGTAAATCTTCCTTGTTATATTCAGTTCTTGGAGAAGCGCAACTTGCTCATGGATATATTTACTGTGATGGATCCGTGGCATATGTACCACAGGTCCCCTGGATTTTATCTGGTACTGTACGTGACAACATACTATTTGGGAAAAGCTATGATCCCGTAAGGTATAGAGATACACTACAGGCATGTGCATTAGATGTTGATATTGAATTGATGGTTGGACATGACATGGTGTATATTGGAGAGAAGGGACTAAATTTATCTGGTGGACAGAGAGCTCGACTTGCTTTGGCGAGCAGGGCAGTGTATGATGGCTCAGATGTTATTATGCTTGATGATGTTCTGAGTGCAGTTGATGCACAAGTTGCTCACTGGATTTTACACAATGCCATTCTTGGCCCTCTTATGCAAGGAAAAACTATATTGCTCTGTACTCACAATGTGCAGGCAATATCTTTAGCTGACGTGGTTGTTGTAATGGACAAGGGGCATGTAAAATGGTTGGGAAGTTCAGCTGCCTTTCCAATTTCTTCATACACAAGATTCTCCCCATCGAATGATCTTGATTTAACTTCAAAAAATCACAGAGAATCTTGCAGCTCAGATTCTTCATCCAAACCTAAGGAGCAATCTCTTCCTGAAAAAGAAATTGTGCATTCTCCGGAGATAGCAGAGGAGATAGTTGAAGTTGAGTTAAGGAAAGAGGGAAAAGTTGAAATTGGAGTGTATAAGAACTATGCTGTCTTCATTGGTCAGTTTGTTACAGTTGCTATATGCCTGTCAGCTATCTTCATGCAAGCATCTCGGAATGGAAATGATTTATGGCTATCATATTGGGTTGATACAACAGAAACTGGTCAAACAGCGCACTCTGTGTCCTTCTATCTGGCTATACTATGTCTATTTTGTGCTGTGAATTCTTTTTTCACATTGGTGAGGGCATTCTCTTTTGCGTTTGGTGGATTACAAGCAGCAATTAAGGTACACAATAGACTGCTTAGCAAGCTTATCAATGCACCTGTGCGATTCTTTGATCAGACCCCGGGTGGAAGAATACTGAACAGATTATCTTCAGATCTTTATACAATTGATGATTCTCTTCCATTCATTATGAACATTCTCCTGGCTAATTTTATAGGCCTGTTGGGCATTGCAATCATTTTGTCATATGTACAGGTCTTCTTCCTAGTCCTCCTATTGCCATTGTGGTATATCTACAGTAAACTACAGTTCTTCTACAGATCCACATCAAGAGAATTACGCCGATTGGACAGTGTTTCTCGTTCTCCAATATATACATCTTTCTCAGAAACACTTGATGGAACTTCAACTATAAGGGCTTTCAAATCCGAGGACTTTTTCTTTGCCAAATTTATTGAACACATCACATTGTATCAAAAGACTTCATACACAGAGACCGTAGCAAGTTTATGGCTTTCCTTGCGTCTTCAGTTATTAGGTGCATTTATCATCTCATTCATAGCTTTGATGGCTGTTGTTGGATCTCATAGAAGTCTGCCTATCAACTTTGGTACCCCAGGGCTGGTAGGATTGGCCCTCTCATATGCAGCTCCTATCGTATCCTTGTTGGGGAGTTTTTTAACAAGTTTCACTGAAACAGAAAAGGAGATGGTTTCAGTTGAAAGAGCACTTCAATACATGGACATTCCTCAAGAAGAACAAGGTGGATGCTTAAATGTGAATCCAGATTGGCCTAACCTAGGAGTTATTGAATTCCAGAATGTCACTTTGAAATATATGCCATCTTTGGCACCTGCAATCTGCAATCTTAGTTTTACTATTGCTGGAGGGACACAGGTTGGAATAATTGGAAGAACAGGTGCTGGAAAGTCTAGTGTGTTAAATGCCCTTTTCCGCCTGACCCCAATATATTCAGGCTCCATTTTAGTTGATGGCATGGACATTAAAAATGTTCCTGTCAGAGAACTGCGTACACATTTGGCTATTGTGCCTCAGAGTCCGTTCTTGTTCAATGGATCATTAAGGGAGAACCTAGATCCATTTAAGATGAGTGACGACTTAAAAATTTGGGATGCTTTGGAGAAGTGCCATGTGAAAGAGGAAGTAGAAGAAGCTGGAGGGCTGGATATTCTTGTAAAGGAAGGAGGTATATCGTTTTCCGTTGGCCAGAGGCAGCTTCTTTGCCTTGCACGTGCGCTTCTTAAATCTTCAAAAGTTCTCTGTTTGGATGAATGCACTGCCAATGTGGACATTCAAACTGCTTCGCTGCTCCACACCACCATATCCAGCAAGTGCAAAGGCATGACAGTGATCACAATTGCTCACAGGATTTCAACTGTCTTAAATATGGATAGCATTCTAATTTTAGACCATGGCAACCTGGCTGAACAAGGAAATCCAAAGGTTCTTCTGAATGATGAGTCCTCATTATTTTCCAGTTTTGTTAAAGCTTCATCAATGTAA 3132 0.4033 MLTELSTCVIVSMIHGVNKWISQLIAIATEQMMKEKDERIRRTGELLTYIRTLKMYGWELIFSSWLMETRSLEVKHLATRKYLDAWCVFFWATTPTLFSIFTFGLFTLMGNQLDAAMVFTCLALFNTLISPLNSFPWVINGLIDAFISSRRLSRFLSCPEHRSNVGDTGSSSSSFLSKQPDSSQRLAIIVQDVSCTWSSSDEPPLNMVLNHVTLSLSKGSFVAIIGEVGSGKSSLLYSVLGEAQLAHGYIYCDGSVAYVPQVPWILSGTVRDNILFGKSYDPVRYRDTLQACALDVDIELMVGHDMVYIGEKGLNLSGGQRARLALASRAVYDGSDVIMLDDVLSAVDAQVAHWILHNAILGPLMQGKTILLCTHNVQAISLADVVVVMDKGHVKWLGSSAAFPISSYTRFSPSNDLDLTSKNHRESCSSDSSSKPKEQSLPEKEIVHSPEIAEEIVEVELRKEGKVEIGVYKNYAVFIGQFVTVAICLSAIFMQASRNGNDLWLSYWVDTTETGQTAHSVSFYLAILCLFCAVNSFFTLVRAFSFAFGGLQAAIKVHNRLLSKLINAPVRFFDQTPGGRILNRLSSDLYTIDDSLPFIMNILLANFIGLLGIAIILSYVQVFFLVLLLPLWYIYSKLQFFYRSTSRELRRLDSVSRSPIYTSFSETLDGTSTIRAFKSEDFFFAKFIEHITLYQKTSYTETVASLWLSLRLQLLGAFIISFIALMAVVGSHRSLPINFGTPGLVGLALSYAAPIVSLLGSFLTSFTETEKEMVSVERALQYMDIPQEEQGGCLNVNPDWPNLGVIEFQNVTLKYMPSLAPAICNLSFTIAGGTQVGIIGRTGAGKSSVLNALFRLTPIYSGSILVDGMDIKNVPVRELRTHLAIVPQSPFLFNGSLRENLDPFKMSDDLKIWDALEKCHVKEEVEEAGGLDILVKEGGISFSVGQRQLLCLARALLKSSKVLCLDECTANVDIQTASLLHTTISSKCKGMTVITIAHRISTVLNMDSILILDHGNLAEQGNPKVLLNDESSLFSSFVKASSM 1043
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g02837 1043 Pfam ABC transporter 825 970 IPR003439 GO:0005524
Arst8g02837 1043 Pfam ABC transporter transmembrane region 7 132 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst8g02837 1043 Pfam ABC transporter transmembrane region 486 737 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst8g02837 1043 FunFam ABC transporter C family member 13 170 426 - -
Arst8g02837 1043 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 17 144 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst8g02837 1043 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 185 401 IPR027417 -
Arst8g02837 1043 CDD ABCC_MRP_domain2 804 1023 - -
Arst8g02837 1043 Gene3D ABC transporter type 1, transmembrane domain 2 164 IPR036640 GO:0005524|GO:0016020
Arst8g02837 1043 Pfam ABC transporter 209 342 IPR003439 GO:0005524
Arst8g02837 1043 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 800 1031 IPR027417 -
Arst8g02837 1043 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 188 416 IPR003439 GO:0005524
Arst8g02837 1043 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 8 1041 - -
Arst8g02837 1043 MobiDBLite consensus disorder prediction 419 444 - -
Arst8g02837 1043 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 8 1041 - -
Arst8g02837 1043 FunFam ATP-binding cassette (ABC) transporter, putative 793 1040 - -
Arst8g02837 1043 Gene3D - 791 1041 IPR027417 -
Arst8g02837 1043 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 806 1039 IPR003439 GO:0005524
Arst8g02837 1043 ProSitePatterns ABC transporters family signature. 942 956 IPR017871 GO:0005524|GO:0016887
Arst8g02837 1043 CDD ABC_6TM_MRP7_D2_like 484 783 - -
Arst8g02837 1043 CDD ABCC_MRP_domain1 188 392 - -
Arst8g02837 1043 SUPERFAMILY ABC transporter transmembrane region 8 160 IPR036640 GO:0005524|GO:0016020
Arst8g02837 1043 Gene3D - 165 418 IPR027417 -
Arst8g02837 1043 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 485 771 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst8g02837 1043 SMART AAA_5 832 1016 IPR003593 GO:0016887
Arst8g02837 1043 SMART AAA_5 218 393 IPR003593 GO:0016887
Arst8g02837 1043 SUPERFAMILY ABC transporter transmembrane region 485 788 IPR036640 GO:0005524|GO:0016020
Arst8g02837 1043 FunFam ABC transporter C family member 5 449 789 - -
Arst8g02837 1043 Gene3D ABC transporter type 1, transmembrane domain 462 790 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g02837 Arst-Chr8 38794821 38805062 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g02837 204 438 Calmodulin-binding Proteins AT2G36910 27.237 1.76e-16 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g02837 K05674 - gmx:100814181 1663.66