Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g02836 ATGACTGTTCCAGAGAAATCGGTTCTTTATTTTGTACCAGCTATTGGAGCATGCCTTTCAGTCCTGGAAATAATTTTTGTGTGGAAGAAAGAACATAATAGTCAGTTTGTTGGATATCATAAGTGGTTTTATAGCTGTTCTGAATTGATTGTGTGGACAAATATCATTCTCTTCTCAAAGTGTGGCAGCAGTCATTACATAATCTTCAGTCGTGTTTTATGCTTCTGGTGGATTCTGAAACCAATTTTGGGGGTCTTCCGTTTGGTGACTACATTCCCATCATTGGAGGTTTCAGTTTGCATCGTGGAAAGCTTAGTTGTTCTCTTGAGTATCACGTATGGCACAGCTATAAATGTGATTAGGGTGAAGAGAGAGTCTTTCAAAAGAAGTTTATTGGGAGATCCACTTCTTTCCTATGACTCGAGCCTTGAGGAGGGTGGCCATCATGACCTTGAAACTAATGAGAGCATTTGGGATTTGATGACTTTCAAATTCATAGCGCCAGTAATGAACCGGGGGGTGGTAAAGCAATTAGACTCTGAAGATCTGCTGCAGATACCTACTAATATGGCTCCATCTTCTTGTCATGATATAATTTCATCCTGCTGGCGAGCTCAATTGACTAATGATGCTTCAAAGCCATCCTTGTTTAGAGCACTCTGTAGTGCCTATGGATGGTCATATCTCTACCTTGGTTTGTTAAAGGTGATTAATGATTGTATTGGTTTTGCGGGACCATTGCTTCTCAATAAGCTAATCCAGTTTCTTCAACAAGGCTCAGTGACCTCTGATGGGTATTTACTTGCAGTATCCTTGGGCCTGACCTCTATAATTAAATCCTTTTTGGATACACAATATTCTTTTCGTCTTGCCAAATTGAAGCTAAAGCTGCGATCCAGCATCATGACTTTAATATATGACAAGTGTCTACGTGTGAACCTAGCAGAGCGTTCAAAATTCACAAATGGAGAAATTCAGACATTTATGTCAGTAGATGCTGACAGAACTGTCAACCTGTGTAATAGTTTCCATGATACATGGAGGATTCGTAGAACAGGAGAACTTTTGACCTATATTCGCACTTTGAAGATGTATGGATGGGAACTTATTTTTTCTAGTTGGTTGATGGAGACAAGATCTTTGGAAGTGAAACACCTAGCTACTCGGAAGTACTTGGATGCATGGTGTGTATTCTTTTGGGCTACCACACCAACACTCTTTTCTATTTTCACATTTGGACTCTTCACACTGATGGGAAATCAACTTGATGCCGCAATGGTTTTCACTTGTCTTGCTTTGTTTAACACACTGATATCGCCATTGAATTCATTTCCATGGGTGATTAATGGATTGATTGATGCCTTTATATCCTCTAGAAGGTTGAGTAGATTTCTTTCTTGTCCTGAGCATAGATCCAATGTGGGAGACACCGGTTCCAGTTCATCATCTTTCTTGAGTAAACAACCTGATTCTTCACAAAGATTGGCTATCATTGTCCAAGATGTATCTTGTACCTGGTCAAGCAGTGATGAACCACCATTAAATATGGTGTTGAATCATGTGACTCTAAGCCTGTCCAAGGGTTCCTTTGTTGCTATTATTGGAGAGGTTGGTTCTGGTAAATCTTCCTTGTTATATTCAGTTCTTGGAGAAGCGCAACTTGCTCATGGATATATTTACTGTGATGGATCCGTGGCATATGTACCACAGGTCCCCTGGATTTTATCTGGTACTGTACGTGACAACATACTATTTGGGAAAAGCTATGATCCCGTAAGGTATAGAGATACACTACAGGCATGTGCATTAGATGTTGATATTGAATTGATGGTTGGACATGACATGGTGTATATTGGAGAGAAGGGACTAAATTTATCTGGTGGACAGAGAGCTCGACTTGCTTTGGCGAGCAGGGCAGTGTATGATGGCTCAGATGTTATTATGCTTGATGATGTTCTGAGTGCAGTTGATGCACAAGTTGCTCACTGGATTTTACACAATGCCATTCTTGGCCCTCTTATGCAAGGAAAAACTATATTGCTCTGTACTCACAATGTGCAGGCAATATCTTTAGCTGACGTGGTTGTTGTAATGGACAAGGGGCATGTAAAATGGTTGGGAAGTTCAGCTGCCTTTCCAATTTCTTCATACACAAGATTCTCCCCATCGAATGATCTTGATTTAACTTCAAAAAATCACAGAGAATCTTGCAGCTCAGATTCTTCATCCAAACCTAAGGAGCAATCTCTTCCTGAAAAAGAAATTGTGCATTCTCCGGAGATAGCAGAGGAGATAGTTGAAGTTGAGTTAAGGAAAGAGGGAAAAGTTGAAATTGGAGTGTATAAGAACTATGCTGTCTTCATTGGTCAGTTTGTTACAGTTGCTATATGCCTGTCAGCTATCTTCATGCAAGCATCTCGGAATGGAAATGATTTATGGCTATCATATTGGGTTGATACAACAGAAACTGGTCAAACAGCGCACTCTGTGTCCTTCTATCTGGCTATACTATGTCTATTTTGTGCTGTGAATTCTTTTTTCACATTGGTGAGGGCATTCTCTTTTGCGTTTGGTGGATTACAAGCAGCAATTAAGGTACACAATAGACTGCTTAGCAAGCTTATCAATGCACCTGTGCGATTCTTTGATCAGACCCCGGGTGGAAGAATACTGAACAGATTATCTTCAGATCTTTATACAATTGATGATTCTCTTCCATTCATTATGAACATTCTCCTGGCTAATTTTATAGGCCTGTTGGGCATTGCAATCATTTTGTCATATGTACAGGTCTTCTTCCTAGTCCTCCTATTGCCATTGTGGTATATCTACAGTAAACTACAGTTCTTCTACAGATCCACATCAAGAGAATTACGCCGATTGGACAGTGTTTCTCGTTCTCCAATATATACATCTTTCTCAGAAACACTTGATGGAACTTCAACTATAAGGGCTTTCAAATCCGAGGACTTTTTCTTTGCCAAATTTATTGAACACATCACATTGTATCAAAAGACTTCATACACAGAGACCGTAGCAAGTTTATGGCTTTCCTTGCGTCTTCAGTTATTAGGTGCATTTATCATCTCATTCATAGCTTTGATGGCTGTTGTTGGATCTCATAGAAGTCTGCCTATCAACTTTGGTACCCCAGGGCTGGTAGGATTGGCCCTCTCATATGCAGCTCCTATCGTATCCTTGTTGGGGAGTTTTTTAACAAGTTTCACTGAAACAGAAAAGGAGATGGTTTCAGTTGAAAGAGCACTTCAATACATGGACATTCCTCAAGAAGAACAAGGTGGATGCTTAAATGTGAATCCAGATTGGCCTAACCTAGGAGTTATTGAATTCCAGAATGTCACTTTGAAATATATGCCATCTTTGGCACCTGCAATCTGCAATCTTAGTTTTACTATTGCTGGAGGGACACAGGTTGGAATAATTGGAAGAACAGGTGCTGGAAAGTCTAGTGTGTTAAATGCCCTTTTCCGCCTGACCCCAATATATTCAGGCTCCATTTTAGTTGATGGCATGGACATTAAAAATGTTCCTGTCAGAGAACTGCGTACACATTTGGCTATTGTGCCTCAGAGTCCGTTCTTGTTCAATGGATCATTAAGGGAGAACCTAGATCCATTTAAGATGAGTGACGACTTAAAAATTTGGGATGCTTTGGAGAAGTGCCATGTGAAAGAGGAAGTAGAAGAAGCTGGAGGGCTGGATATTCTTGTAAAGGAAGGAGGTATATCGTTTTCCGTTGGCCAGAGGCAGCTTCTTTGCCTTGCACGTGCGCTTCTTAAATCTTCAAAAGTTCTCTGTTTGGATGAATGCACTGCCAATGTGGACATTCAAACTGCTTCGCTGCTCCACACCACCATATCCAGCAAGTGCAAAGGCATGACAGTGATCACAATTGCTCACAGGATTTCAACTGTCTTAAATATGGATAGCATTCTAATTTTAGACCATGGCAACCTGGCTGAACAAGGAAATCCAAAGGTTCTTCTGAATGATGAGTCCTCATTATTTTCCAGTTTTGTTAAAGCTTCATCAATGTAA 4059 0.4033 MTVPEKSVLYFVPAIGACLSVLEIIFVWKKEHNSQFVGYHKWFYSCSELIVWTNIILFSKCGSSHYIIFSRVLCFWWILKPILGVFRLVTTFPSLEVSVCIVESLVVLLSITYGTAINVIRVKRESFKRSLLGDPLLSYDSSLEEGGHHDLETNESIWDLMTFKFIAPVMNRGVVKQLDSEDLLQIPTNMAPSSCHDIISSCWRAQLTNDASKPSLFRALCSAYGWSYLYLGLLKVINDCIGFAGPLLLNKLIQFLQQGSVTSDGYLLAVSLGLTSIIKSFLDTQYSFRLAKLKLKLRSSIMTLIYDKCLRVNLAERSKFTNGEIQTFMSVDADRTVNLCNSFHDTWRIRRTGELLTYIRTLKMYGWELIFSSWLMETRSLEVKHLATRKYLDAWCVFFWATTPTLFSIFTFGLFTLMGNQLDAAMVFTCLALFNTLISPLNSFPWVINGLIDAFISSRRLSRFLSCPEHRSNVGDTGSSSSSFLSKQPDSSQRLAIIVQDVSCTWSSSDEPPLNMVLNHVTLSLSKGSFVAIIGEVGSGKSSLLYSVLGEAQLAHGYIYCDGSVAYVPQVPWILSGTVRDNILFGKSYDPVRYRDTLQACALDVDIELMVGHDMVYIGEKGLNLSGGQRARLALASRAVYDGSDVIMLDDVLSAVDAQVAHWILHNAILGPLMQGKTILLCTHNVQAISLADVVVVMDKGHVKWLGSSAAFPISSYTRFSPSNDLDLTSKNHRESCSSDSSSKPKEQSLPEKEIVHSPEIAEEIVEVELRKEGKVEIGVYKNYAVFIGQFVTVAICLSAIFMQASRNGNDLWLSYWVDTTETGQTAHSVSFYLAILCLFCAVNSFFTLVRAFSFAFGGLQAAIKVHNRLLSKLINAPVRFFDQTPGGRILNRLSSDLYTIDDSLPFIMNILLANFIGLLGIAIILSYVQVFFLVLLLPLWYIYSKLQFFYRSTSRELRRLDSVSRSPIYTSFSETLDGTSTIRAFKSEDFFFAKFIEHITLYQKTSYTETVASLWLSLRLQLLGAFIISFIALMAVVGSHRSLPINFGTPGLVGLALSYAAPIVSLLGSFLTSFTETEKEMVSVERALQYMDIPQEEQGGCLNVNPDWPNLGVIEFQNVTLKYMPSLAPAICNLSFTIAGGTQVGIIGRTGAGKSSVLNALFRLTPIYSGSILVDGMDIKNVPVRELRTHLAIVPQSPFLFNGSLRENLDPFKMSDDLKIWDALEKCHVKEEVEEAGGLDILVKEGGISFSVGQRQLLCLARALLKSSKVLCLDECTANVDIQTASLLHTTISSKCKGMTVITIAHRISTVLNMDSILILDHGNLAEQGNPKVLLNDESSLFSSFVKASSM 1352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g02836 1352 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 497 725 IPR003439 GO:0005524
Arst8g02836 1352 FunFam ATP-binding cassette (ABC) transporter, putative 1102 1349 - -
Arst8g02836 1352 Gene3D - 1100 1350 IPR027417 -
Arst8g02836 1352 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 233 347 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst8g02836 1352 Gene3D ABC transporter type 1, transmembrane domain 771 1099 IPR036640 GO:0005524|GO:0016020
Arst8g02836 1352 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 154 347 - -
Arst8g02836 1352 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 154 347 - -
Arst8g02836 1352 FunFam ABC transporter C family member 13 479 735 - -
Arst8g02836 1352 CDD ABCC_MRP_domain2 1113 1332 - -
Arst8g02836 1352 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 348 453 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst8g02836 1352 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 - -
Arst8g02836 1352 Gene3D - 472 726 IPR027417 -
Arst8g02836 1352 CDD ABC_6TM_MRP7_D1_like 230 461 - -
Arst8g02836 1352 FunFam ABC transporter C family member 5 758 1098 - -
Arst8g02836 1352 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1109 1340 IPR027417 -
Arst8g02836 1352 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 794 1080 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst8g02836 1352 SMART AAA_5 527 702 IPR003593 GO:0016887
Arst8g02836 1352 SMART AAA_5 1141 1325 IPR003593 GO:0016887
Arst8g02836 1352 SUPERFAMILY ABC transporter transmembrane region 217 469 IPR036640 GO:0005524|GO:0016020
Arst8g02836 1352 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 494 710 IPR027417 -
Arst8g02836 1352 Pfam ABC transporter 518 651 IPR003439 GO:0005524
Arst8g02836 1352 CDD ABCC_MRP_domain1 497 701 - -
Arst8g02836 1352 CDD ABC_6TM_MRP7_D2_like 793 1092 - -
Arst8g02836 1352 MobiDBLite consensus disorder prediction 728 753 - -
Arst8g02836 1352 ProSitePatterns ABC transporters family signature. 1251 1265 IPR017871 GO:0005524|GO:0016887
Arst8g02836 1352 Pfam ABC transporter transmembrane region 795 1046 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst8g02836 1352 Pfam ABC transporter transmembrane region 230 335 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst8g02836 1352 Pfam ABC transporter 1134 1279 IPR003439 GO:0005524
Arst8g02836 1352 Gene3D ABC transporter type 1, transmembrane domain 348 469 IPR036640 GO:0005524|GO:0016020
Arst8g02836 1352 Gene3D ABC transporter type 1, transmembrane domain 217 347 IPR036640 GO:0005524|GO:0016020
Arst8g02836 1352 SUPERFAMILY ABC transporter transmembrane region 794 1097 IPR036640 GO:0005524|GO:0016020
Arst8g02836 1352 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1115 1348 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g02836 Arst-Chr8 38794821 38808391 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g02836 513 747 Calmodulin-binding Proteins AT2G36910 27.237 1.60e-16 83.6