LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Arst8g02814	ATGGCTGACATAGCAGGTTTACTTGAGGCAGCAGGATCAAGGTTCAGTGCATTGGAGCTTATTGGGCAGGGATCATTTGGTGATGTCTATAAAGGGTTTGACAGAGAGCTTAACAAAGAAGTTGCTATCAAAGTAATTGATTTGGAAGAATCGGAGGATGAAATTGATGATATTCAGAAGGAAATTTCTGTTCTGTCACAATGCCGATCTCCATACATCACTGAGTACTATGGTTCCTATCTCAATCAAACTAAACTCTGGATAATAATGGAATACATGGCTGGCGGCTCTGTCGCTGATCTACTTCAATCCGGTCCTCCACTGGATGAAACATCCATTGCTTGCATTCTACGTGACTTGCTACATGCAATTGATTACCTACACACTGAAGGAAAAATTCATAGAGACATTAAAGCTGCAAACATTTTATTGACCGAGAATGGTGATGTAAAGGTTGCAGATTTTGGTGTTTCTGCACAGCTCACGAGGACCATATCAAGGAGAAAGACATTTGTAGGAACACCTTTCTGGATGGCACCAGAGGTTATTCAGAATTCCGAAGGATATAATGAGAAGGCAGATATCTGGTCTATGGGGATCACTGCAATTGAGATGGCAAAAGGGGAGCCTCCACTTGCCGATCTTCATCCCATGAGAGTGCTTTTTATCATACCTCGAGAGAATCCTCCGCAGTTAGATGAGCATTTTTCTCGTCCCCTGATTATGCCAAGTGCTAAGGAACTTCTCAAACACCGTCTTATTCGGAATGCTAGGAAGAGTCCAAAGCTTGCAGAAAGAATAAGGGAGCGTCCAAAGTACCACATAAAGGATGATCCGGGGGCAGATGATCCGGGGACTGTTAAAAAAGTCCCAAGAGGGATAGGTGAGGCTTCTGATACTATGAAGGTGTCTAGAGATGTTAGAGCTGAAGAAACTAGTAGAACCAGTGGTCAGGGTCAAACTGTAAAAAGTGCTGGATGGGACTTCAACATTGGTGGGTCACAAGGCACTGTTCGTAGCGGTACTGTTCGTAGTGTAGCACGACCACCTGTTTCACAAAATCAGGTTACCCAAAGAAAAGCTCCGGAGAGTGGCTATCAAGGGGGAACTGTCAGTAGAAGTGCACTAAACGAGTCAGTTGAAAGTTCACTCGGAAAGGATCTTAGAGTTACATATCATGATGAGGATCCGGATGATCATCTTGAAGATGATGAAGGGAATGGATCAGGAACTGTCGTAATTCGATCTCCAAAAGCATCAAGGCCATCAGTAGTTCGTGGCCAAAGCTCCCAGTCTAGCAGCAGCTATGCTTCTCTTGAAGATGCTTCTACCAGTGGAACTGTTGTCTTGCGTAACCAGAATGATGATTCTGATTCTTCACAAACACCTAGGTCCCGCAAGGGACTTAACGACAGAAATTCTATTACTTCACTGGAAGATAGTGCTGCAAATCTTGCTGAGGCAAAGGCTGCTATCCTAAGGAAAGCAAATGCTAAAGAGAGAAAATTCAACAATATACAAGAAAGCAAGAGAGACCAAATGGCAGGCAGTTCTGATTCTTCAAGATCACATCATGAATACCATGATCCTCAAAAGGGCATGTCAAGATCACAATATGCCAGTGATGATGAAGAGAGTGCTAAAGTTATGTCATCCTCTGTGCCATTATCAGTTTTGCTCGCTCCTTCACTAAAAGAGACCATTGCTAATGATCCAGAAGGGGCAATTGTGCGAGCGGTTATCAGTTCTCTCGTAAACATGGAGGGCACAAGGCCAAGATCCTGCGATGTTCTTGTCAGAAAGTTGCTTCAGCGGTTGGCAAGTTCAAAGGAAGATTCATTGAAGGACCTGCAGGAACTAGCAGGCCAACTATTCAGCAAGACCAAGGGAGCCGGAGACACACGAAACACCGAAGCCGATAGCCGGAGGAAACAACAGAACAAGGACATCCATCAAAATAGCAATTTGAGCCCACTAGCCAGATTTCTTCTCTCAAGATGGCAGGGTCAAAGCTCACGTGATCTAAACCAATCTTAA	2037	0.4413	MADIAGLLEAAGSRFSALELIGQGSFGDVYKGFDRELNKEVAIKVIDLEESEDEIDDIQKEISVLSQCRSPYITEYYGSYLNQTKLWIIMEYMAGGSVADLLQSGPPLDETSIACILRDLLHAIDYLHTEGKIHRDIKAANILLTENGDVKVADFGVSAQLTRTISRRKTFVGTPFWMAPEVIQNSEGYNEKADIWSMGITAIEMAKGEPPLADLHPMRVLFIIPRENPPQLDEHFSRPLIMPSAKELLKHRLIRNARKSPKLAERIRERPKYHIKDDPGADDPGTVKKVPRGIGEASDTMKVSRDVRAEETSRTSGQGQTVKSAGWDFNIGGSQGTVRSGTVRSVARPPVSQNQVTQRKAPESGYQGGTVSRSALNESVESSLGKDLRVTYHDEDPDDHLEDDEGNGSGTVVIRSPKASRPSVVRGQSSQSSSSYASLEDASTSGTVVLRNQNDDSDSSQTPRSRKGLNDRNSITSLEDSAANLAEAKAAILRKANAKERKFNNIQESKRDQMAGSSDSSRSHHEYHDPQKGMSRSQYASDDEESAKVMSSSVPLSVLLAPSLKETIANDPEGAIVRAVISSLVNMEGTRPRSCDVLVRKLLQRLASSKEDSLKDLQELAGQLFSKTKGAGDTRNTEADSRRKQQNKDIHQNSNLSPLARFLLSRWQGQSSRDLNQS	678

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Arst8g02814	678	MobiDBLite	consensus disorder prediction	515	543	-	-
	Arst8g02814	678	PANTHER	STERILE20-LIKE KINASE, ISOFORM B-RELATED	11	627	-	-
	Arst8g02814	678	MobiDBLite	consensus disorder prediction	313	381	-	-
	Arst8g02814	678	MobiDBLite	consensus disorder prediction	627	652	-	-
	Arst8g02814	678	Gene3D	Transferase(Phosphotransferase) domain 1	12	289	-	-
	Arst8g02814	678	MobiDBLite	consensus disorder prediction	260	285	-	-
	Arst8g02814	678	Coils	Coil	600	620	-	-
	Arst8g02814	678	CDD	STKc_MST3_like	13	273	-	-
	Arst8g02814	678	MobiDBLite	consensus disorder prediction	502	548	-	-
	Arst8g02814	678	MobiDBLite	consensus disorder prediction	633	649	-	-
	Arst8g02814	678	FunFam	serine/threonine-protein kinase dst1 isoform X1	12	286	-	-
	Arst8g02814	678	SMART	serkin_6	15	254	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Arst8g02814	678	MobiDBLite	consensus disorder prediction	422	474	-	-
	Arst8g02814	678	SUPERFAMILY	Protein kinase-like (PK-like)	12	268	IPR011009	-
	Arst8g02814	678	Coils	Coil	41	68	-	-
	Arst8g02814	678	MobiDBLite	consensus disorder prediction	260	474	-	-
	Arst8g02814	678	ProSiteProfiles	Protein kinase domain profile.	15	273	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Arst8g02814	678	ProSitePatterns	Protein kinases ATP-binding region signature.	21	44	IPR017441	GO:0005524
	Arst8g02814	678	Pfam	Protein kinase domain	16	215	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Arst8g02814	Arst-Chr8	38528372	38536900	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Arst8g02814	1	675	MAP Kinase Kinase Kinase Kinase	AT3G15220	60.593	0.0	762

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	STE_STE20-YSK	Arst8g02814		Pkinase	1.3e-60	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Arst8g02814	K08838		-	gmx:100815042	996.882