Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g02810 ATGGAGGCCAGGATGAGGAGAACAACAGTTGAGAAGATGAGGAAGGATAGCACAGTTGATGAGGTAGAAGAGGAGTTAGAAGAGGAAGATGAGAGTGGTGTTGGTGATGGTGTCCTTGCAGAAGAAGAGAAGAAGAAAAGTGCTGTTGGAAGTGGGAGAAGAGGATCAAATGGGGCAGGAGGAGTTTCTCCACCCTCCTGCCAGGCTGAGAGGTGTGGCGCCGACTTGACCGAGGCAAAAAGGTACCACCGCCGCCATAAGGTGTGTGAGTTTCATTCCAAGGCACCTGTGGTGGTGGTTGCAGGGATGAGGCAGAGGTTTTGCCAGCAATGTAGCAGGTTCCATGACCTGGCAGAATTTGATGAAGCCAAAAGAAGCTGCCGCAGGCGCTTGGCCGGACACAATGAGAGACGCCGGAAGAGCAACATAGAGCCTTGCAACGAGGGAAGCGGCCGAGGCGGCAAAGGGCAACCCCCTAAGGAAAGCCACTGCAGAAACGCCGACGATCGGGGAAGAACTCAGATGAACATTTCAGGGAGCTCTGGCTACAAGTCCTTCCATATGTTTCCAACTTTTGGGTAG 582 0.5309 MEARMRRTTVEKMRKDSTVDEVEEELEEEDESGVGDGVLAEEEKKKSAVGSGRRGSNGAGGVSPPSCQAERCGADLTEAKRYHRRHKVCEFHSKAPVVVVAGMRQRFCQQCSRFHDLAEFDEAKRSCRRRLAGHNERRRKSNIEPCNEGSGRGGKGQPPKESHCRNADDRGRTQMNISGSSGYKSFHMFPTFG 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g02810 193 MobiDBLite consensus disorder prediction 1 69 - -
Arst8g02810 193 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 47 156 IPR044817 GO:0003677
Arst8g02810 193 MobiDBLite consensus disorder prediction 1 20 - -
Arst8g02810 193 FunFam Squamosa promoter-binding-like protein 14 59 128 - -
Arst8g02810 193 ProSiteProfiles Zinc finger SBP-type profile. 64 141 IPR004333 GO:0003677
Arst8g02810 193 SUPERFAMILY SBT domain 65 144 IPR036893 GO:0003677|GO:0005634
Arst8g02810 193 Coils Coil 12 32 - -
Arst8g02810 193 MobiDBLite consensus disorder prediction 21 36 - -
Arst8g02810 193 Gene3D - 58 128 IPR036893 GO:0003677|GO:0005634
Arst8g02810 193 MobiDBLite consensus disorder prediction 171 185 - -
Arst8g02810 193 Pfam SBP domain 67 140 IPR004333 GO:0003677
Arst8g02810 193 MobiDBLite consensus disorder prediction 132 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g02810 Arst-Chr8 38425511 38427120 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g02810 52 154 SBP-box Gene Family AT1G53160 70.192 1.60e-42 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Arst8g02810 SBP 1e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g02810 - - aprc:113864686 251.521
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g02810 8 38425511 38427120 Arst10g00322 10 2699040 2700301 ECH
Arst8g02810 8 38425511 38427120 Arst8g02810 8 38425511 38427120 ECH