Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g02783 ATGTGTTGTTGTTCTTGGTGTACATGCATCTCTAACTGGATAAAGATGGAAGGTTCTTCAGGTTCTGCCTGGCAGAAATCTGATAGCTCGAGGACGTTGAATAGTTCCGGAGTCTCTGATAGGAACCAAAGGCATCGTTGTCCTGAAAGAAATCGCTTATCTGGTGAGGCTTCACACGATTCGAGCTCAAAGAAGGAAAGGGACAGGGTTCTTTTGGCACAAGGTGATCACAATAAGAATCTGGGTGGGTTTTCTGGGTTTTGTGATGACGAAGTAGGGGCGGACCCTTTTGTTTGCTCTATAGAATGGGGTGATATTAGCCTGAGGCAATGGTTAGATAAACCGGATCGATCCGTAGATGTCTTTGAATGTTTGCACATATTTAGGCAAATAGTAGAAATTGTTAACTTAGCACATTCTCAAGGAGTTGTAGTTCATAATGTCAGGCCTTCCTGCTTTGTCATGTCGTCTTTCAACCACATCTCATTTATTGAATCTGCATCTTGTTCGGATTCTGGATCAGATTCTTTAGGAGATGGATTGAATGGCCAAGGTGTTGAGGTTAAAACTCCAATGTCTCTCTGCCCCCACGACATGCATCATCGGAGTTTAGGAAGTGAAGATTTTGTGCCTGTCAAACCCTCAACAACTGCTTTGTCAGATTCTAGTTGCATGCTGTCGAGTGCAGTGTATGCAGCTCGTGCGTCGTTAATAGAAGAAACAGAAGAAAATAAAATGAAGGATAGGAGAAAGGCCGAAGAAGTAGAAGGAAAGAAGCAATCATTTCCAATGAAACAGATACTATTGATGGAGATGAGTTGGTATACTAGTCCCGAAGAGGCTTCGGGCAGTCCTAGTTCCTGTGCTTCAGATGTTTACCGCTTGGGGGTTCTCCTTTTTGAGCTATTCTGTCCACTGAGCTCAAGAGAAGAGAAGAGTAGAACCATGTCTAGCCTTCGACACAGAGTTCTTCCTCCGCAGTTACTTCTAAAGTGGCCTAAAGAAGCCTCCTTTTGCTTACTGTTACTACATCCTGAGCCTAGCAGTCGTCCAACATTGGGGGAGTTGCTGCAGAGCGATTTCCTCAATGAACAGAGAGATGACATGGAAGAACGTGAAGCGGCAATAGAACTTCGACACAGAATAGAGGATCAGGACTTGTTACTAGAATTCCTTTTGTTAATTCAACAAAGAAAACGGGAAGTAGCTGAGAAGTTGCAACACACTATCTCATTTCTGTGTTCAGATATTGAAGAAGTTGCCAAGAAGCAAGGCAGACTTAAAGAGATTACCGGAGCCGAACTAGGGTGTGATAATCATTCAACATCAAGTTTCCCATCCATGACTGTTGTTGATAGTGAGGATTCTGCTTGCACGGGGACCAGAAAACGATTTAGACCAGGGATGCATGTTAGAAACATGGAGGAATATGATGATAACATAGTTGATGATCACAAAAATCAGGGAAGTTATCTTTCGAAAAGCTCACGGCTGATGAGGAACTTTAAGAAACTAGAATCAGCATACTTCTTAACACGTTGCCGACCATCGTTGGCGAGACCAGTGGCTAGACATTTGCCTTTAGCAAACGATGGTAGAGGTTCTGTTGTTGTGTCTGAAAGAAGTTGTGTCAACAACTTAGCATCAAAAGAGCAATGCAGGGAGGGTTCAAGTGCTTGGATAAATCCTTTCCTTGAGGGTTTATGCAAGTACTTATCTTTCAGTAAGCTAAAGGTTAAGGCTGACCTTAAGCAAGGAGATCTTTTGCATTCTTCCAACCTAGTATGCTCACTCAGCTTCGATCGTGATGGAGAATTTTTCGCTACTGCTGGCGTGAATAAGAAAATCAAAGTGTTTGAATGTGATGCAATCATAAATGAGGATCGTGATATCCACTATCCGGTGGTGGAGATGGCTAGTAGGTCAAAGCTGAGCAGCATATCTTGGAATACTTACATCAAAAGTCAAATTGCTTCGAGTAACTTCGAAGGGGTTGTACAGTTATGGGATGTGACAAGAAGTCAAGTACTGTCCGAAATGCGGGAGCATGAGCGGCGGGTGTGGTCGATCGATTTCTCATCAGCAGACCCGACAATGTTGGCAAGTGGGAGCGATGACGGTTCTGTCAAGCTATGGAGTATCAATCAGGGAGTTAGTATCGGTACCATCAAGACGAAGGCAAATGTGTGCTGCGTTCAGTTCCCTCTGGATTCAGCTCGCTTCCTCGCATTTGGTTCGGCAGATCACCGGATATACTACTATGATCTTCGCAACTTGAAAGTGCCGCTTTGTACATTGATTGGACATAGTAAGACTGTGAGCTACATCAAGTTTGTAGACAATGTGACTCTTGCCTCTGCATCCACGGATAACACACTTAAGCTTTGGGATTTGTCTACATGCGCGTCTCGAGTCATCGACTCGCCTGTTCAATCATTCACCGGTCATATGAATGTTAAGAACTTTGTGGGGTTATCAGTTTCCGACGGTTATATAGCCACCGGTTCAGAGACAAATGAGGTGTTCATATACCACAAGGCCTTTCCCATGCCAGCATTATCATTCAAGTTTCAGAACACCGACCCCCTTTCTGGCCATGAAGTCGAAGATGCCACACAGTTTGTCTCTTCGGTATGTTGGCGCGGCCAGTCCTCCACCTTACTCGCCGCGAATTCGACTGGGAATGTCAAGATTCTGGAGATGGTTTGA 2709 0.4422 MCCCSWCTCISNWIKMEGSSGSAWQKSDSSRTLNSSGVSDRNQRHRCPERNRLSGEASHDSSSKKERDRVLLAQGDHNKNLGGFSGFCDDEVGADPFVCSIEWGDISLRQWLDKPDRSVDVFECLHIFRQIVEIVNLAHSQGVVVHNVRPSCFVMSSFNHISFIESASCSDSGSDSLGDGLNGQGVEVKTPMSLCPHDMHHRSLGSEDFVPVKPSTTALSDSSCMLSSAVYAARASLIEETEENKMKDRRKAEEVEGKKQSFPMKQILLMEMSWYTSPEEASGSPSSCASDVYRLGVLLFELFCPLSSREEKSRTMSSLRHRVLPPQLLLKWPKEASFCLLLLHPEPSSRPTLGELLQSDFLNEQRDDMEEREAAIELRHRIEDQDLLLEFLLLIQQRKREVAEKLQHTISFLCSDIEEVAKKQGRLKEITGAELGCDNHSTSSFPSMTVVDSEDSACTGTRKRFRPGMHVRNMEEYDDNIVDDHKNQGSYLSKSSRLMRNFKKLESAYFLTRCRPSLARPVARHLPLANDGRGSVVVSERSCVNNLASKEQCREGSSAWINPFLEGLCKYLSFSKLKVKADLKQGDLLHSSNLVCSLSFDRDGEFFATAGVNKKIKVFECDAIINEDRDIHYPVVEMASRSKLSSISWNTYIKSQIASSNFEGVVQLWDVTRSQVLSEMREHERRVWSIDFSSADPTMLASGSDDGSVKLWSINQGVSIGTIKTKANVCCVQFPLDSARFLAFGSADHRIYYYDLRNLKVPLCTLIGHSKTVSYIKFVDNVTLASASTDNTLKLWDLSTCASRVIDSPVQSFTGHMNVKNFVGLSVSDGYIATGSETNEVFIYHKAFPMPALSFKFQNTDPLSGHEVEDATQFVSSVCWRGQSSTLLAANSTGNVKILEMV 902
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g02783 902 ProSitePatterns Trp-Asp (WD) repeats signature. 784 798 IPR019775 -
Arst8g02783 902 PANTHER PROTEIN SPA1-RELATED 2 41 902 IPR044630 GO:0009640
Arst8g02783 902 SUPERFAMILY WD40 repeat-like 590 899 IPR036322 GO:0005515
Arst8g02783 902 PANTHER PROTEIN SPA1-RELATED 2 41 902 IPR044630 GO:0009640
Arst8g02783 902 FunFam E3 ubiquitin-protein ligase RFWD2 isoform X1 563 902 - -
Arst8g02783 902 ProSiteProfiles Protein kinase domain profile. 1 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g02783 902 Coils Coil 238 258 - -
Arst8g02783 902 MobiDBLite consensus disorder prediction 42 68 - -
Arst8g02783 902 Gene3D Transferase(Phosphotransferase) domain 1 105 374 - -
Arst8g02783 902 SMART WD40_4 759 797 IPR001680 GO:0005515
Arst8g02783 902 SMART WD40_4 806 845 IPR001680 GO:0005515
Arst8g02783 902 SMART WD40_4 716 755 IPR001680 GO:0005515
Arst8g02783 902 SMART WD40_4 856 900 IPR001680 GO:0005515
Arst8g02783 902 SMART WD40_4 585 620 IPR001680 GO:0005515
Arst8g02783 902 SMART WD40_4 631 670 IPR001680 GO:0005515
Arst8g02783 902 SMART WD40_4 673 713 IPR001680 GO:0005515
Arst8g02783 902 MobiDBLite consensus disorder prediction 22 41 - -
Arst8g02783 902 MobiDBLite consensus disorder prediction 22 68 - -
Arst8g02783 902 Pfam WD domain, G-beta repeat 762 797 IPR001680 GO:0005515
Arst8g02783 902 Pfam WD domain, G-beta repeat 590 619 IPR001680 GO:0005515
Arst8g02783 902 Pfam WD domain, G-beta repeat 676 713 IPR001680 GO:0005515
Arst8g02783 902 ProSiteProfiles Trp-Asp (WD) repeats profile. 680 722 IPR001680 GO:0005515
Arst8g02783 902 Gene3D - 566 902 IPR015943 GO:0005515
Arst8g02783 902 ProSiteProfiles Trp-Asp (WD) repeats profile. 766 800 IPR001680 GO:0005515
Arst8g02783 902 SUPERFAMILY Protein kinase-like (PK-like) 73 366 IPR011009 -
Arst8g02783 902 PRINTS G protein beta WD-40 repeat signature 657 671 IPR020472 -
Arst8g02783 902 PRINTS G protein beta WD-40 repeat signature 700 714 IPR020472 -
Arst8g02783 902 PRINTS G protein beta WD-40 repeat signature 784 798 IPR020472 -
Arst8g02783 902 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 766 800 - -
Arst8g02783 902 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 680 717 - -
Arst8g02783 902 SMART serkin_6 13 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g02783 Arst-Chr8 38144678 38150599 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g02783 670 844 Miscellaneous Gene Families AT5G08390 25.424 5.64e-07 51.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK PEK_PEK Arst8g02783 WD40 0.0001 CL0186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g02783 K26557 - gmx:100811457 1542.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g02783 8 38144678 38150599 Arst8g02783 8 38144678 38150599 ECH