Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Arst8g02780 | ATGTGTTGTTGTTCTTGGTGTACATGCATCTCTAACTGGATAAAGATGGAAGGTTCTTCAGGTTCTGCCTGGCAGAAATCTGATAGCTCGAGGACGTTGAATAGTTCCGGAGTCTCTGATAGGAACCAAAGGCATCGTTGTCCTGAAAGAAATCGCTTATCTGGTGAGGCTTCACACGATTCGAGCTCAAAGAAGGAAAGGGACAGGGTTCTTTTGGCACAAGGTGATCACAATAAGAATCTGGGTGGGTTTTCTGGGTTTTGTGATGACGAAGTAGGGGCGGACCCTTTTGTTTGCTCTATAGAATGGGGTGATATTAGCCTGAGGCAATGGTTAGATAAACCGGATCGATCCGTAGATGTCTTTGAATGTTTGCACATATTTAGGCAAATAGTAGAAATTGTTAACTTAGCACATTCTCAAGGAGTTGTAGTTCATAATGTCAGGCCTTCCTGCTTTGTCATGTCGTCTTTCAACCACATCTCATTTATTGAATCTGCATCTTGTTCGGATTCTGGATCAGATTCTTTAGGAGATGGATTGAATGGCCAAGGTGTTGAGGTTAAAACTCCAATGTCTCTCTGCCCCCACGACATGCATCATCGGAGTTTAGGAAGTGAAGATTTTGTGCCTGTCAAACCCTCAACAACTGCTTTGTCAGATTCTAGTTGCATGCTGTCGAGTGCAGTGTATGCAGCTCGTGCGTCGTTAATAGAAGAAACAGAAGAAAATAAAATGAAGGATAGGAGAAAGGCCGAAGAAGTAGAAGGAAAGAAGCAATCATTTCCAATGAAACAGATACTATTGATGGAGATGAGTTGGTATACTAGTCCCGAAGAGGCTTCGGGCAGTCCTAGTTCCTGTGCTTCAGATGTTTACCGCTTGGGGGTTCTCCTTTTTGAGCTATTCTGTCCACTGAGCTCAAGAGAAGAGAAGAGTAGAACCATGTCTAGCCTTCGACACAGAGTTCTTCCTCCGCAGTTACTTCTAAAGTGGCCTAAAGAAGCCTCCTTTTGCTTACTGTTACTACATCCTGAGCCTAGCAGTCGTCCAACATTGGGGGAGTTGCTGCAGAGCGATTTCCTCAATGAACAGAGAGATGACATGGAAGAACGTGAAGCGGCAATAGAACTTCGACACAGAATAGAGGATCAGGACTTGTTACTAGAATTCCTTTTGTTAATTCAACAAAGAAAACGGGAAGTAGCTGAGAAGTTGCAACACACTATCTCATTTCTGTGTTCAGATATTGAAGAAGTTGCCAAGAAGCAAGGCAGACTTAAAGAGATTACCGGAGCCGAACTAGGGTGTGATAATCATTCAACATCAAGTTTCCCATCCATGACTGTTGTTGATAGTGAGGATTCTGCTTGCACGGGGACCAGAAAACGATTTAGACCAGGGATGCATGTTAGAAACATGGAGGAATATGATGATAACATAGTTGATGATCACAAAAATCAGGGAAGTTATCTTTCGAAAAGCTCACGGCTGATGAGGAACTTTAAGAAACTAGAATCAGCATACTTCTTAACACGTTGCCGACCATCGTTGGCGAGACCAGTGGCTAGACATTTGCCTTTAGCAAACGATGGTAGAGGTTCTGTTGTTGTGTCTGAAAGAAGTTGTGTCAACAACTTAGCATCAAAAGAGCAATGCAGGGAGGGTTCAAGTGCTTGGATAAATCCTTTCCTTGAGGGTTTATGCAAGTACTTATCTTTCAGTAAGCTAAAGGTTAAGGCTGACCTTAAGCAAGGAGATCTTTTGCATTCTTCCAACCTAGTATGCTCACTCAGCTTCGATCGTGATGGAGAATTTTTCGCTACTGCTGGCGTGAATAAGAAAATCAAAGTGTTTGAATGTGATGCAATCATAAATGAGGATCGTGATATCCACTATCCGGTGGTGGAGATGGCTAGTAGGTCAAAGCTGAGCAGCATATCTTGGAATACTTACATCAAAAGTCAAATTGCTTCGAGTAACTTCGAAGGGGTTGTACAGTTATGGGATGTGACAAGAAGTCAAGTACTGTCCGAAATGCGGGAGCATGAGCGGCGGGTGTGGTCGATCGATTTCTCATCAGCAGACCCGACAATGTTGGCAAGTGGGAGCGATGACGGTTCTGTCAAGCTATGGAGTATCAATCAGGCAATTCCATTCTTGCACTTGGTGGAATGTCAGCTTTGA | 2187 | 0.4344 | MCCCSWCTCISNWIKMEGSSGSAWQKSDSSRTLNSSGVSDRNQRHRCPERNRLSGEASHDSSSKKERDRVLLAQGDHNKNLGGFSGFCDDEVGADPFVCSIEWGDISLRQWLDKPDRSVDVFECLHIFRQIVEIVNLAHSQGVVVHNVRPSCFVMSSFNHISFIESASCSDSGSDSLGDGLNGQGVEVKTPMSLCPHDMHHRSLGSEDFVPVKPSTTALSDSSCMLSSAVYAARASLIEETEENKMKDRRKAEEVEGKKQSFPMKQILLMEMSWYTSPEEASGSPSSCASDVYRLGVLLFELFCPLSSREEKSRTMSSLRHRVLPPQLLLKWPKEASFCLLLLHPEPSSRPTLGELLQSDFLNEQRDDMEEREAAIELRHRIEDQDLLLEFLLLIQQRKREVAEKLQHTISFLCSDIEEVAKKQGRLKEITGAELGCDNHSTSSFPSMTVVDSEDSACTGTRKRFRPGMHVRNMEEYDDNIVDDHKNQGSYLSKSSRLMRNFKKLESAYFLTRCRPSLARPVARHLPLANDGRGSVVVSERSCVNNLASKEQCREGSSAWINPFLEGLCKYLSFSKLKVKADLKQGDLLHSSNLVCSLSFDRDGEFFATAGVNKKIKVFECDAIINEDRDIHYPVVEMASRSKLSSISWNTYIKSQIASSNFEGVVQLWDVTRSQVLSEMREHERRVWSIDFSSADPTMLASGSDDGSVKLWSINQAIPFLHLVECQL | 728 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Arst8g02780 | 728 | Pfam | WD domain, G-beta repeat | 590 | 619 | IPR001680 | GO:0005515 | |
Arst8g02780 | 728 | Pfam | WD domain, G-beta repeat | 676 | 713 | IPR001680 | GO:0005515 | |
Arst8g02780 | 728 | ProSiteProfiles | Protein kinase domain profile. | 1 | 362 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Arst8g02780 | 728 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 680 | 715 | - | - | |
Arst8g02780 | 728 | Coils | Coil | 238 | 258 | - | - | |
Arst8g02780 | 728 | MobiDBLite | consensus disorder prediction | 42 | 68 | - | - | |
Arst8g02780 | 728 | SUPERFAMILY | Protein kinase-like (PK-like) | 72 | 366 | IPR011009 | - | |
Arst8g02780 | 728 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 680 | 715 | IPR001680 | GO:0005515 | |
Arst8g02780 | 728 | MobiDBLite | consensus disorder prediction | 22 | 41 | - | - | |
Arst8g02780 | 728 | MobiDBLite | consensus disorder prediction | 22 | 68 | - | - | |
Arst8g02780 | 728 | PANTHER | PROTEIN SPA1-RELATED 2 | 40 | 717 | IPR044630 | GO:0009640 | |
Arst8g02780 | 728 | SMART | WD40_4 | 631 | 670 | IPR001680 | GO:0005515 | |
Arst8g02780 | 728 | SMART | WD40_4 | 585 | 620 | IPR001680 | GO:0005515 | |
Arst8g02780 | 728 | SMART | WD40_4 | 673 | 713 | IPR001680 | GO:0005515 | |
Arst8g02780 | 728 | SMART | serkin_6 | 13 | 362 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Arst8g02780 | 728 | SUPERFAMILY | WD40 repeat-like | 589 | 717 | IPR036322 | GO:0005515 | |
Arst8g02780 | 728 | Gene3D | - | 566 | 725 | IPR015943 | GO:0005515 | |
Arst8g02780 | 728 | Gene3D | Transferase(Phosphotransferase) domain 1 | 105 | 374 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Arst8g02780 | Arst-Chr8 | 38144672 | 38149408 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Arst8g02780 | 590 | 714 | Miscellaneous Gene Families | AT5G08390 | 30.400 | 3.81e-08 | 55.1 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | PEK_PEK | Arst8g02780 | WD40 | 8e-05 | CL0186 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Arst8g02780 | K26557 | - | gmx:100811457 | 1195.65 |