Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g02780 ATGTGTTGTTGTTCTTGGTGTACATGCATCTCTAACTGGATAAAGATGGAAGGTTCTTCAGGTTCTGCCTGGCAGAAATCTGATAGCTCGAGGACGTTGAATAGTTCCGGAGTCTCTGATAGGAACCAAAGGCATCGTTGTCCTGAAAGAAATCGCTTATCTGGTGAGGCTTCACACGATTCGAGCTCAAAGAAGGAAAGGGACAGGGTTCTTTTGGCACAAGGTGATCACAATAAGAATCTGGGTGGGTTTTCTGGGTTTTGTGATGACGAAGTAGGGGCGGACCCTTTTGTTTGCTCTATAGAATGGGGTGATATTAGCCTGAGGCAATGGTTAGATAAACCGGATCGATCCGTAGATGTCTTTGAATGTTTGCACATATTTAGGCAAATAGTAGAAATTGTTAACTTAGCACATTCTCAAGGAGTTGTAGTTCATAATGTCAGGCCTTCCTGCTTTGTCATGTCGTCTTTCAACCACATCTCATTTATTGAATCTGCATCTTGTTCGGATTCTGGATCAGATTCTTTAGGAGATGGATTGAATGGCCAAGGTGTTGAGGTTAAAACTCCAATGTCTCTCTGCCCCCACGACATGCATCATCGGAGTTTAGGAAGTGAAGATTTTGTGCCTGTCAAACCCTCAACAACTGCTTTGTCAGATTCTAGTTGCATGCTGTCGAGTGCAGTGTATGCAGCTCGTGCGTCGTTAATAGAAGAAACAGAAGAAAATAAAATGAAGGATAGGAGAAAGGCCGAAGAAGTAGAAGGAAAGAAGCAATCATTTCCAATGAAACAGATACTATTGATGGAGATGAGTTGGTATACTAGTCCCGAAGAGGCTTCGGGCAGTCCTAGTTCCTGTGCTTCAGATGTTTACCGCTTGGGGGTTCTCCTTTTTGAGCTATTCTGTCCACTGAGCTCAAGAGAAGAGAAGAGTAGAACCATGTCTAGCCTTCGACACAGAGTTCTTCCTCCGCAGTTACTTCTAAAGTGGCCTAAAGAAGCCTCCTTTTGCTTACTGTTACTACATCCTGAGCCTAGCAGTCGTCCAACATTGGGGGAGTTGCTGCAGAGCGATTTCCTCAATGAACAGAGAGATGACATGGAAGAACGTGAAGCGGCAATAGAACTTCGACACAGAATAGAGGATCAGGACTTGTTACTAGAATTCCTTTTGTTAATTCAACAAAGAAAACGGGAAGTAGCTGAGAAGTTGCAACACACTATCTCATTTCTGTGTTCAGATATTGAAGAAGTTGCCAAGAAGCAAGGCAGACTTAAAGAGATTACCGGAGCCGAACTAGGGTGTGATAATCATTCAACATCAAGTTTCCCATCCATGACTGTTGTTGATAGTGAGGATTCTGCTTGCACGGGGACCAGAAAACGATTTAGACCAGGGATGCATGTTAGAAACATGGAGGAATATGATGATAACATAGTTGATGATCACAAAAATCAGGGAAGTTATCTTTCGAAAAGCTCACGGCTGATGAGGAACTTTAAGAAACTAGAATCAGCATACTTCTTAACACGTTGCCGACCATCGTTGGCGAGACCAGTGGCTAGACATTTGCCTTTAGCAAACGATGGTAGAGGTTCTGTTGTTGTGTCTGAAAGAAGTTGTGTCAACAACTTAGCATCAAAAGAGCAATGCAGGGAGGGTTCAAGTGCTTGGATAAATCCTTTCCTTGAGGGTTTATGCAAGTACTTATCTTTCAGTAAGCTAAAGGTTAAGGCTGACCTTAAGCAAGGAGATCTTTTGCATTCTTCCAACCTAGTATGCTCACTCAGCTTCGATCGTGATGGAGAATTTTTCGCTACTGCTGGCGTGAATAAGAAAATCAAAGTGTTTGAATGTGATGCAATCATAAATGAGGATCGTGATATCCACTATCCGGTGGTGGAGATGGCTAGTAGGTCAAAGCTGAGCAGCATATCTTGGAATACTTACATCAAAAGTCAAATTGCTTCGAGTAACTTCGAAGGGGTTGTACAGTTATGGGATGTGACAAGAAGTCAAGTACTGTCCGAAATGCGGGAGCATGAGCGGCGGGTGTGGTCGATCGATTTCTCATCAGCAGACCCGACAATGTTGGCAAGTGGGAGCGATGACGGTTCTGTCAAGCTATGGAGTATCAATCAGGCAATTCCATTCTTGCACTTGGTGGAATGTCAGCTTTGA 2187 0.4344 MCCCSWCTCISNWIKMEGSSGSAWQKSDSSRTLNSSGVSDRNQRHRCPERNRLSGEASHDSSSKKERDRVLLAQGDHNKNLGGFSGFCDDEVGADPFVCSIEWGDISLRQWLDKPDRSVDVFECLHIFRQIVEIVNLAHSQGVVVHNVRPSCFVMSSFNHISFIESASCSDSGSDSLGDGLNGQGVEVKTPMSLCPHDMHHRSLGSEDFVPVKPSTTALSDSSCMLSSAVYAARASLIEETEENKMKDRRKAEEVEGKKQSFPMKQILLMEMSWYTSPEEASGSPSSCASDVYRLGVLLFELFCPLSSREEKSRTMSSLRHRVLPPQLLLKWPKEASFCLLLLHPEPSSRPTLGELLQSDFLNEQRDDMEEREAAIELRHRIEDQDLLLEFLLLIQQRKREVAEKLQHTISFLCSDIEEVAKKQGRLKEITGAELGCDNHSTSSFPSMTVVDSEDSACTGTRKRFRPGMHVRNMEEYDDNIVDDHKNQGSYLSKSSRLMRNFKKLESAYFLTRCRPSLARPVARHLPLANDGRGSVVVSERSCVNNLASKEQCREGSSAWINPFLEGLCKYLSFSKLKVKADLKQGDLLHSSNLVCSLSFDRDGEFFATAGVNKKIKVFECDAIINEDRDIHYPVVEMASRSKLSSISWNTYIKSQIASSNFEGVVQLWDVTRSQVLSEMREHERRVWSIDFSSADPTMLASGSDDGSVKLWSINQAIPFLHLVECQL 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g02780 728 Pfam WD domain, G-beta repeat 590 619 IPR001680 GO:0005515
Arst8g02780 728 Pfam WD domain, G-beta repeat 676 713 IPR001680 GO:0005515
Arst8g02780 728 ProSiteProfiles Protein kinase domain profile. 1 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g02780 728 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 680 715 - -
Arst8g02780 728 Coils Coil 238 258 - -
Arst8g02780 728 MobiDBLite consensus disorder prediction 42 68 - -
Arst8g02780 728 SUPERFAMILY Protein kinase-like (PK-like) 72 366 IPR011009 -
Arst8g02780 728 ProSiteProfiles Trp-Asp (WD) repeats profile. 680 715 IPR001680 GO:0005515
Arst8g02780 728 MobiDBLite consensus disorder prediction 22 41 - -
Arst8g02780 728 MobiDBLite consensus disorder prediction 22 68 - -
Arst8g02780 728 PANTHER PROTEIN SPA1-RELATED 2 40 717 IPR044630 GO:0009640
Arst8g02780 728 SMART WD40_4 631 670 IPR001680 GO:0005515
Arst8g02780 728 SMART WD40_4 585 620 IPR001680 GO:0005515
Arst8g02780 728 SMART WD40_4 673 713 IPR001680 GO:0005515
Arst8g02780 728 SMART serkin_6 13 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g02780 728 SUPERFAMILY WD40 repeat-like 589 717 IPR036322 GO:0005515
Arst8g02780 728 Gene3D - 566 725 IPR015943 GO:0005515
Arst8g02780 728 Gene3D Transferase(Phosphotransferase) domain 1 105 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g02780 Arst-Chr8 38144672 38149408 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g02780 590 714 Miscellaneous Gene Families AT5G08390 30.400 3.81e-08 55.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK PEK_PEK Arst8g02780 WD40 8e-05 CL0186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g02780 K26557 - gmx:100811457 1195.65