Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g02759 ATGGTTTGGTATTTGTTCACGATTGATATTCAAACTATCTTGATTGCTCTTGGCATAGTCATATTGTTCTTCTTCATCTTCTACCAAATCCTCTATGGATTGTTCTTTTGGTACTTAGAATTAAGCCCGGAGGAATTACGTGATATCGAAGAAGCGATCCATCGATCATATGGGGATACTCCTAATCACCATATTATTCTCTTGGAAACTCTTATCCAAAGAGATATACAAAATTCGTTGGCCATGGTGGACGACAAGGAATGTGGACCGAAACTTAGAGCTTCGAATAAGCTGCCACCATTGGTGAGGTATGGCATGCACGACACAACAAATAGTCATTGCGACGAATGTGCCATTTGCATGGAAGATTTTGAAGATGGACAATATTGTCAAGTGTTTCCTAAGTGCAAGCACATGTATCATTCAAATTGTATAGACACTTGGTTGCAAAAGAATCCAACATGTCCCATATGTCGTAGTTGCATTGTGTAA 492 0.3902 MVWYLFTIDIQTILIALGIVILFFFIFYQILYGLFFWYLELSPEELRDIEEAIHRSYGDTPNHHIILLETLIQRDIQNSLAMVDDKECGPKLRASNKLPPLVRYGMHDTTNSHCDECAICMEDFEDGQYCQVFPKCKHMYHSNCIDTWLQKNPTCPICRSCIV 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g02759 163 Pfam Ring finger domain 115 159 IPR001841 -
Arst8g02759 163 SUPERFAMILY RING/U-box 116 162 - -
Arst8g02759 163 ProSiteProfiles Zinc finger RING-type profile. 117 159 IPR001841 -
Arst8g02759 163 SMART ring_2 117 158 IPR001841 -
Arst8g02759 163 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 10 161 IPR044675 -
Arst8g02759 163 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 81 162 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g02759 Arst-Chr8 37989909 37990400 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g02759 105 163 C3H Transcription Factor Family AT3G18930 40.678 6.98e-15 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g02759 - - adu:107462572 345.125