Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g02732 ATGCAGGAAGAAGGTTTGGATGTCCAAACAGCTAGAAATGCTGACCACTATGGTGCCCTTATCCACCATCTCTCTTTAGTCCGCAATAAGCGCTGCCTAATGGCCTATGTAAATAACCGAGCTGAGATTATAAGAAGCTTGTTGTGGAAGATTGGCAGTGTGCTTCCTAAAGAGATTGAGGAGAAGTTTTCTCACACAGAGGAAGAGTATTTCAACAAGTATTCTGGAGAATTGAAAAAATACATGTCAAAAATGGAGTTAGACCTGACAGTGGATATGGTGCCGCCAAAAGATCCTTACATCAAAGTAAGGGTCCTTGATGACATTGGAGATGGCATTGTGCTTAGCGATAAGACTGCCAATTTTGCTCGTCATTCGATCCACTTTCTGAAGCGAACTGATGCCGAACAATTCATTTCACGGGGCTTAATGGAGGAACTCACAGGTTGA 450 0.4289 MQEEGLDVQTARNADHYGALIHHLSLVRNKRCLMAYVNNRAEIIRSLLWKIGSVLPKEIEEKFSHTEEEYFNKYSGELKKYMSKMELDLTVDMVPPKDPYIKVRVLDDIGDGIVLSDKTANFARHSIHFLKRTDAEQFISRGLMEELTG 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g02732 149 SUPERFAMILY GINS helical bundle-like 13 97 IPR036224 -
Arst8g02732 149 CDD GINS_B_Psf1 99 147 - -
Arst8g02732 149 PANTHER PARTNER OF SLD5 3 148 IPR005339 GO:0000811|GO:0006260
Arst8g02732 149 CDD GINS_A_psf1 1 87 IPR005339 GO:0000811|GO:0006260
Arst8g02732 149 Gene3D - 1 85 - -
Arst8g02732 149 Pfam GINS complex protein 12 67 IPR021151 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g02732 Arst-Chr8 37632121 37636131 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g02732 1 149 Core DNA Replication Machinery Family AT1G80190 71.053 4.24e-78 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g02732 K10732 - qsa:O6P43_027860 257.299