Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g02719 ATGGGAATTCAAGAGAAAGACCCTCTCTCGCAATTGAGTTTACCGCCGGGTTTCCGATTTTATCCGACGGACGAGGAGCTTCTCGTTCAGTATCTGTGCCGCAAGGTTGCTGGCCACCATTTCTCCCTGGAAATCATTGGCGAAATTGATTTGTATAAGTTCGACCCTTGGGTTCTTCCAAGTAAGGCAATTTTTGGCGAGAAAGAATGGTACTTCTTTAGTCCGAGGGATAGGAAGTATCCGAATGGATCGCGACCCAATCGAGTAGCCGGGTCGGGTTACTGGAAAGCTACCGGAACCGATAAGACTATCACGACCGAAGGAAGGAAAGTTGGTATCAAGAAAGCTCTGGTTTTCTACATTGGTAAGGCACCCAAAGGCACCAAAACAAACTGGATCATGCACGAGTATCGCCTCCTAGACTCTACCCGCAAGAACGGGAGCACCAAGCTTGACGATTGGGTTCTGTGCCGGATATACAAGAAGAATTCAAGCGCACAGCAGAAGGTACCAAACGGCGTCGTTTCGAGTAGCGAGCAATATGCCACGCAATACAGCAACGGATCTTCTTCAAACTCCTCTTCCTCCCACCTCGACGAGGTGCTCGAGTCCCTGCCAGAGATCGACGACCGTTGCTTCGCCTTGCCACGTGTCAACTCCTTAAGAGCGCTGCAGCAGCAGCGCCATCACCAAGAAGACACCAAGGTCGGCCTACTCCAACAGCAACAGCAACAGGGTCTCGTAGCCGGCACCGGTAGTTTCTTGGACTGGGCTTCCGGGCCGGGGATTCTGAACGATTTGGGCCAGGCCCAACAGGGGATTGTTAACTACGGAAATGACCTCTTTGTCCCTTCGGTGTGCCACGTGGATTCCAATTTGGTGCCAGCAAAGATTGAAGAGGAGGTTCAGAGCGGCGTGAAGACTCAATCCGGATTCTTTCAGCAGGGACCGAACCCCAATGACTTTACACAAGCATTCTCAAACCAGCTAGATCCTTACGGGTTTAGTAGGTACTCGGTTCAACCGGTGGGGTTCGGGTTCAGGCAATGA 1050 0.5162 MGIQEKDPLSQLSLPPGFRFYPTDEELLVQYLCRKVAGHHFSLEIIGEIDLYKFDPWVLPSKAIFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKTITTEGRKVGIKKALVFYIGKAPKGTKTNWIMHEYRLLDSTRKNGSTKLDDWVLCRIYKKNSSAQQKVPNGVVSSSEQYATQYSNGSSSNSSSSHLDEVLESLPEIDDRCFALPRVNSLRALQQQRHHQEDTKVGLLQQQQQQGLVAGTGSFLDWASGPGILNDLGQAQQGIVNYGNDLFVPSVCHVDSNLVPAKIEEEVQSGVKTQSGFFQQGPNPNDFTQAFSNQLDPYGFSRYSVQPVGFGFRQ 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g02719 349 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 13 226 - -
Arst8g02719 349 FunFam NAC domain-containing protein 72-like 23 167 - -
Arst8g02719 349 Pfam No apical meristem (NAM) protein 15 139 IPR003441 GO:0003677|GO:0006355
Arst8g02719 349 ProSiteProfiles NAC domain profile. 14 162 IPR003441 GO:0003677|GO:0006355
Arst8g02719 349 Gene3D NAC domain 23 168 IPR036093 GO:0003677|GO:0006355
Arst8g02719 349 SUPERFAMILY NAC domain 10 162 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g02719 Arst-Chr8 37415488 37417160 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g02719 1 335 NAC Transcription Factor Family AT1G52890 57.522 5.03e-121 350
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Arst8g02719 NAM 2.1e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g02719 - - gmx:100170718 478.789