Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g02715 ATGGAGAGCACCGACTCGTCCACCGGTTCGCAACAACCGAACCTTCCACCGGGTTTCCGGTTCCACCCCACCGACGAGGAGCTCGTTGTTCACTACCTGAAGAAGAAAGCTGCATCAGCTCCTCTCCCAGTCGCCATCATCGCCGAGGTTGATCTCTACAAGTTCGATCCATGGGAGCTACCAGCTAAGGCAGCGTTTGGGGAGCAAGAGTGGTACTTCTTTAGCCCAAGGGACAGGAAGTATCCGAACGGTGCTCGGCCAAACAGGGCGGCAACTTCCGGGTACTGGAAGGCAACCGGGACGGATAAGCCGGTGCTGACCTCCGGTGGGACCCAGAAGGTCGGCGTGAAGAAGGCTTTGGTCTTCTATGGAGGGAAGCCCCCCAGAGGGATAAAGACAAATTGGATCATGCATGAGTATAGACTTGCTGATAACAAACCTAACAATAGGCCTCCTGGTTGTGACTTGGGTAACAAGAAAAACTCTCTAAGGCTTGATGATTGGGTATTGTGCCGAATCTACAAGAAGAACAACACACATAGGTCTCCAATGGAACATGAGAGGGAAGATTCCATGGATGACATGATTGGAGGGATTCCTCCTTCCATCAACGTGGGCCAAATGAATGCAAGATTTCATCTCTCAAAAATGTCAACAAGCTTTAGCAACGCTTTGTTGGAAAACGACCATCACCATCACCAGAATCTTCTGGAAGGTATGATGCTAGGAGGAGGAACCAACAACAGCAATCCAAACATGTTGGGATTGGGATCAGCCTCAAACACCATTAACAATAATAGTAATAAGGCAGAGCTTTCATTTGTACCAACCATGACTACATCTTCAAACACCAAGAGGACTCTATCATCACTCTATTGGAATGAAGATGATGTTGCTGCCAACACAACATCATGGGAACAATACCTTATCAAATTCAAGGAATGAATTGGTATGCTTAG 959 0.4797 MESTDSSTGSQQPNLPPGFRFHPTDEELVVHYLKKKAASAPLPVAIIAEVDLYKFDPWELPAKAAFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVLTSGGTQKVGVKKALVFYGGKPPRGIKTNWIMHEYRLADNKPNNRPPGCDLGNKKNSLRLDDWVLCRIYKKNNTHRSPMEHEREDSMDDMIGGIPPSINVGQMNARFHLSKMSTSFSNALLENDHHHHQNLLEGMMLGGGTNNSNPNMLGLGSASNTINNNSNKAELSFVPTMTTSSNTKRTLSSLYWNEDDVAAXXXXFNLESGDHNHGENNGTSASSIATLLNQLPQTPSLHQHNIMGTIPYQIQGMNWYA 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g02715 358 Gene3D NAC domain 24 181 IPR036093 GO:0003677|GO:0006355
Arst8g02715 358 ProSiteProfiles NAC domain profile. 15 176 IPR003441 GO:0003677|GO:0006355
Arst8g02715 358 Pfam No apical meristem (NAM) protein 16 142 IPR003441 GO:0003677|GO:0006355
Arst8g02715 358 SUPERFAMILY NAC domain 7 176 IPR036093 GO:0003677|GO:0006355
Arst8g02715 358 MobiDBLite consensus disorder prediction 1 17 - -
Arst8g02715 358 MobiDBLite consensus disorder prediction 239 261 - -
Arst8g02715 358 MobiDBLite consensus disorder prediction 1 22 - -
Arst8g02715 358 PANTHER NAC TRANSCRIPTION FACTOR 56 15 228 - -
Arst8g02715 358 FunFam NAC transcription factor 56 24 181 - -
Arst8g02715 358 MobiDBLite consensus disorder prediction 241 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g02715 Arst-Chr8 37295606 37297503 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g02715 1 358 NAC Transcription Factor Family AT3G15510 52.972 1.01e-123 358
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Arst8g02715 NAM 9.5e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g02715 - - gmx:100170710 575.474