Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g02692 ATGAACGAGAAGGCCAACGTAACCAAGGAGCTCAACGCCAAGCACAAGAAGATACTGGAAGGGCTTCTTAAATTACCAGAGAATAGGGAATGTGCCGACTGCAAAGCTAAGGGTCCAAGATGGGCTAGCGTAAATCTTGGCATCTTCATATGCATGCAGTGCTCAGGAATACATCGAAGTTTGGGAGTACATATATCAAAGGTTCGTTCTGCAACTTTAGACACATGGCTCCCCGAGCAAGTTGCATTCATTCAGTCCATGGGGAACGAGAGAGCAAATAGCTACTGGGAAGCAGAATTACCTCCAAACTATGATAGAGTTGGAATCGAGAATTTCATTCGTGCAAAGTATGAAGAGAAAAGATGGGTTGCAAGGGATGGGAAACCAAAATCACCTTCTAGACTGCGAGAAGAGAAAAGTTCTTCACATTGGCAGAGACCTGTGGAAAGAAGTGGGCATGGTTATGCAGCAGCTTCTGAGAATACCGTTGAGGAAAGGAAGAAAACCCAACCTTCAAATCCAAATCCGGCTGCAAGGATTAGTATTCTTACTCCTCCCAAAGCATCTGAACATGTTGCTCCTGTTAGCAAACCTCAGCATGTTGAGAAAGCAGAACCAGTAGCACCTCAACCACAAGTTGAAACTTCAAAGCAGGTTACAGACACAGCTCAAAATATTCCTGCAAAAGTTGATTATGCTACAGATCTTTTCAACCTGTTATCAATGGATGGCCCTAGCGAAAATGGCTCAGAGGCAACTGGTACTACTACTGAAGATAATAACTGGGCAGGTTTCCAATCTGCTCCAGTGGCTTCAACAACTGAGAAGGCTAGTCCTCCAAAAGCAGTTGAGAGTACTCCTCAATCTGCATCTGGAATTGAGGATCTATTTAAAGATTCACCTTCAGTGACACCAAGCTTAGCTGCAGAAAAACCCCAGAAAGATGTAAAAAATGATATCATGAGCCTCTTTGAGAAGAGCAATATGGTCTCTCCATTCTCTATGCATCAACAGCAGCTTGCCATGTTAGCACAGCAACAGTCTCTTCTAATGGCTGCTGCAGCTAAATCAAATGTTGGGGATCCCAAGTACCCTGCTGGTATACAGCAACCTAGGCCCAATGTTCCTATCCAGAATTGGCCAGCTGCTGGTTACTCGATTCCTGGAGTCATGCCCATGGGTGGTCAAAGAGATCTGCAGACACTTATGCAGATAACGGCTCAGACTAGGGGCTTGACTCCACCACAATCAGCTGGGAGCTCTGTTCAGTATCCACCATCTAGTTTCTATGGCATGGGGCAAGTTGCTCCAGTTAATGGAACAACGACAATGGGAGTGGGTAAAAATCAATCAAAAACTCCAGTGGCATCAACCACTTCACAATCTGCAAAGGATTATGATTTTTCGTCCTTAACTCAAGGGATGTTTGCAAAGCCTTGA 1440 0.4472 MNEKANVTKELNAKHKKILEGLLKLPENRECADCKAKGPRWASVNLGIFICMQCSGIHRSLGVHISKVRSATLDTWLPEQVAFIQSMGNERANSYWEAELPPNYDRVGIENFIRAKYEEKRWVARDGKPKSPSRLREEKSSSHWQRPVERSGHGYAAASENTVEERKKTQPSNPNPAARISILTPPKASEHVAPVSKPQHVEKAEPVAPQPQVETSKQVTDTAQNIPAKVDYATDLFNLLSMDGPSENGSEATGTTTEDNNWAGFQSAPVASTTEKASPPKAVESTPQSASGIEDLFKDSPSVTPSLAAEKPQKDVKNDIMSLFEKSNMVSPFSMHQQQLAMLAQQQSLLMAAAAKSNVGDPKYPAGIQQPRPNVPIQNWPAAGYSIPGVMPMGGQRDLQTLMQITAQTRGLTPPQSAGSSVQYPPSSFYGMGQVAPVNGTTTMGVGKNQSKTPVASTTSQSAKDYDFSSLTQGMFAKP 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g02692 479 CDD ArfGap 19 117 - -
Arst8g02692 479 Gene3D Arf GTPase activating protein 1 130 IPR038508 -
Arst8g02692 479 FunFam stromal membrane-associated protein 1 isoform X1 1 128 - -
Arst8g02692 479 MobiDBLite consensus disorder prediction 125 146 - -
Arst8g02692 479 MobiDBLite consensus disorder prediction 241 314 - -
Arst8g02692 479 SMART arf_gap_3 16 130 IPR001164 GO:0005096
Arst8g02692 479 MobiDBLite consensus disorder prediction 241 295 - -
Arst8g02692 479 ProSiteProfiles ARF GTPase-activating proteins domain profile. 16 130 IPR001164 GO:0005096
Arst8g02692 479 SUPERFAMILY ArfGap/RecO-like zinc finger 15 124 IPR037278 -
Arst8g02692 479 MobiDBLite consensus disorder prediction 125 224 - -
Arst8g02692 479 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD5 1 478 IPR044520 GO:0005096
Arst8g02692 479 MobiDBLite consensus disorder prediction 441 469 - -
Arst8g02692 479 Pfam Putative GTPase activating protein for Arf 17 125 IPR001164 GO:0005096
Arst8g02692 479 PRINTS HIV Rev interacting protein signature 68 89 IPR001164 GO:0005096
Arst8g02692 479 PRINTS HIV Rev interacting protein signature 47 64 IPR001164 GO:0005096
Arst8g02692 479 PRINTS HIV Rev interacting protein signature 28 47 IPR001164 GO:0005096
Arst8g02692 479 MobiDBLite consensus disorder prediction 441 479 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g02692 Arst-Chr8 36991197 36997464 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g02692 16 123 C2H2 Transcription Factor Family AT4G05330 49.138 4.92e-30 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g02692 K12486 - gmx:100789910 735.717