Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Arst8g02682 | ATGGCTGCTGCTCCAAATGAATCAACTCATCAAATGGTTATATCTGGAGCAAAATGCAAACAGAAACATGCAGTATCAGGAGGTGGTTCATCATCAACAGCCATGATTAATGCATCATTATCATTGAGTGAAAACAATGGCACACAACCTAATAATTCTGGGTGTTGCTTATATGTTTCACCTCAAACTGGTTTGATCCGTTTCCTCAATTTTGGTCAGATGAAACAGCAGCAATATTTGAAAGATTTGGGATTTCCCAATTCTACAATGACTCCTATGTTCAAGAAAATTCTAAGTGCAACTGATACTAAAGTCAAGAGTGGACGTCTTGTGATTCCAACCAAAGGCGCAAGGGCTTATCTTCCAGAACTTGAGGATAAGCAACGATGCATTCTCCTTGAAATTCTTGACACCAAAGGGAATATTTGGAAGTTAAGCTACCGTTTTTGGGAGAACAACAGAGGGAGGATCTATGTTCTTGGAGGCCTTAAAGCTTATATTACTATTTGGAAATGGCAAGTTGGTGACCAAGTCACATTTTATCGAATTGAACCAGAAAATAAATATCTTATTGTAACTGAAAAAGAGCTTCCAGTATCTGAAAAGAAACTTCCAGCATCGTCGTCTTAA | 630 | 0.381 | MAAAPNESTHQMVISGAKCKQKHAVSGGGSSSTAMINASLSLSENNGTQPNNSGCCLYVSPQTGLIRFLNFGQMKQQQYLKDLGFPNSTMTPMFKKILSATDTKVKSGRLVIPTKGARAYLPELEDKQRCILLEILDTKGNIWKLSYRFWENNRGRIYVLGGLKAYITIWKWQVGDQVTFYRIEPENKYLIVTEKELPVSEKKLPASSS | 209 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Arst8g02682 | 209 | CDD | B3_DNA | 92 | 191 | IPR003340 | GO:0003677 | |
Arst8g02682 | 209 | Gene3D | - | 72 | 197 | IPR015300 | - | |
Arst8g02682 | 209 | Pfam | B3 DNA binding domain | 102 | 188 | IPR003340 | GO:0003677 | |
Arst8g02682 | 209 | SUPERFAMILY | DNA-binding pseudobarrel domain | 91 | 193 | IPR015300 | - | |
Arst8g02682 | 209 | PANTHER | B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 | 86 | 200 | - | - | |
Arst8g02682 | 209 | SMART | B3_2 | 94 | 196 | IPR003340 | GO:0003677 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Arst8g02682 | Arst-Chr8 | 36932702 | 36935998 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Arst8g02682 | 73 | 191 | B3 DNA Binding Superfamily | AT4G32010 | 41.176 | 2.71e-23 | 95.1 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | B3 | Arst8g02682 | B3 | 4.9e-09 | CL0405 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Arst8g02682 | - | - | adu:110274859 | 425.246 |