Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g02648 ATGATGTCCCGAGAAAGAGACAAATTCCTCAATAGCGCTTCCAGATTTAATGGACCTTGCAGCTTGGAGCAATCGTTTTATGGTATCACCGTTTATATAATTAACTATGATTTTTCAATCAAATTTAGACTACCCAGTACCTGCCCTTTAAGCAAAACCATGAGAAGCCTTGTGTCACTTTTTGTGACTTCTCTTTTCGCTTCATTCTTATCAAGCTTCTCAGCTCTAGACATTCTTACTACACATAAACTCATCAAAGATGGTGACAAGTTAGTTTCCGCAAGAGGGACCTTTGAACTGGGATTCTTCAGCCCTGGTAACTCCAGAAACCGGTATTTGGGAATATGGTACGTGGCTTCACCTAGAACTCCTATATGGGTTGCAAATAGAGAAGCTCCTATTAGAGATGGTTCAGGAATTCTCAGGATCACTAAGGGGGGTATCCTTAACCTTATTAATATCACAGGTAATATTGTTTGGTCATCAAATGCATATGCAACTGCAGAAGATGCATTTGCACAGCTTCTGGAATCAGGGAATCTTGTGGTGAGAGCCTCTAATGGTAGAACCACAGAATCCTATTTGTGGCAGAGTTTTGATTATCCTTGTGACACATATATGCCTGGAATGAAGATTGGGAAGAACCTAGTTACTGGTTTGGAGACATTCTTAACATCTTGGAAGAGTAAAGATGACCCTGCCCCTGGTAAGTACTCAATTCATCTTGATACTCATGGTTGGCCACAGGTGGTTATAAGAAAAGGAACCACTATAGTGTCACGATTTGGATCGTGGAATGGTCTTGAGTTGACAGGAAATCCAGCAAGGTCAGAAGCATCACTGGTCTTTCAATTCACATATAGTGAAAGTGAAGTTTATGTGGGTTACCAACTCAGGAAGAGTTCTGGGTTGTCTATGTTGTCAAGAGATGTACTGCATCCATCAGGCAACATGCAGCGATTCGTATGGATCAATCGGATCCAGAATTGGGCACTCTCCTCAACATCTCTGTCAAATCAGTGCCAACATTATGCATGGTGTGGTGCTAATGCCGTCTGCAATAACAATAACTTCCCTATTTGTGGATGCTTGACCGGGTTCAGTCCTAAGTCTCCAAAAGATTGGAATAATGGGAACTGGTTTACTGGATGTGAACGCAGGACGAACTTGAATTGCCATGATGATGGCTTCTTGAGGTACACAGGAGTTAAATTGCCTAATACCTCCTCATCATTTTTCAGTGAAACCTTGAATCTTAAAGAATGTGGTCAATTGTGCTTAAGTAAATGTTCGTGTACTGCATATGCAAACTTATATGTTGATGGAAGTGGTTGCTTGCTTTGGTTTGTCGAACTGGTGGATATAATCCAATATAGCGAGCGTGGTCAAGACCTTTATGTAAGGCTAGCTGCTTCAGACATTGATAGTGTAAAGAAAATGGAGCGATCCAACAAAGACAAAAGACTAGTGGGTATCATAATTATATGTGGTGTTTTGGTCATGATTATCTTCCTCTTTCTGGGACACTTAACCTATAAACAAAGTGACAGCAGAAGAAAGAGAGAGAAAGTTCACAACCAGGATTACAGATGTGGACAAAGAAAGGAAGAGGTGGACTGGCCAACATTTGATTTTCAAACTATAGTTAATGCAACAGCCAACTTTTCTAGTGATAACAAGGTGGGAGAAGGTGGATTTGGCCCTGTTTACAAGGGCACATTAATTGATGGACAAGAAATAGCTGTGAAGAGGCTCTCCATAAATTCTGGCCAAGGACTAAATGAATTGAGAAATGAAGTCAATACAATTGCTAAGCTTCAGCACCGTAATCTTGTTAAGCTTTTTGGTTGTTGTCTTGAGGAGGAAGAGAAAATGTTAGTATATGAATATGTGCCTAACAAAAGCTTGGACTCCTTTATATTTGACCAAACAAGGAGAAAATTACTAGATTGGCCAACACGCATGCATATTATTGTTGGCATTGCTCGTGGGCTTCTTTATCTTCATCAAGACTCTAGAATGAGGATTATTCACAGGGACCTCAAAGCTAGCAATATTCTTCTAGATGCCAATATGAATCCAAAAATCTCTGACTTTGGGCTTGCGAAGGCCTTTGGGGGAGATCAAACTGAGGCGAAAACTAATCGGATAGTTGGGACATATGGTTATATGCCTCCTGAGTATGCAGTTCATGGGAAATTTTCTGTGAAGTCAGATGTCTTTAGCTTTGGAGTTTTGGCACTGGAGATACTAAGCGGCAAGAAGAATAGAGATTTCAGCGACCCGAATCATAGCCTTAATCTTCTTGGACATAGCTGGAGATTGTGGGTTGAGCAGAGACACTTAGAACTGATTGATGATTCATTAAGCAACGCTTCTGATGAAACTGAAATACTTAGATGCATACATATTGCTCTATTATGTGTGCAACAAAGTCCGGAAGACAGGCCAGACATGCTTTCTGTGGTTGTAATGTTAACTAGTGATAGCAATCTCCCTAAGCCAAAACAGCCTGCATTTTATGTGGAAAGGAATTGTTACAATAAAGGCTTTCTAGCAAGTAATCAGAACACATGTTCTGAAAATGAAGTTACAATCTCAGTGGTAGAGGCAAGGTAG 2619 0.4047 MMSRERDKFLNSASRFNGPCSLEQSFYGITVYIINYDFSIKFRLPSTCPLSKTMRSLVSLFVTSLFASFLSSFSALDILTTHKLIKDGDKLVSARGTFELGFFSPGNSRNRYLGIWYVASPRTPIWVANREAPIRDGSGILRITKGGILNLINITGNIVWSSNAYATAEDAFAQLLESGNLVVRASNGRTTESYLWQSFDYPCDTYMPGMKIGKNLVTGLETFLTSWKSKDDPAPGKYSIHLDTHGWPQVVIRKGTTIVSRFGSWNGLELTGNPARSEASLVFQFTYSESEVYVGYQLRKSSGLSMLSRDVLHPSGNMQRFVWINRIQNWALSSTSLSNQCQHYAWCGANAVCNNNNFPICGCLTGFSPKSPKDWNNGNWFTGCERRTNLNCHDDGFLRYTGVKLPNTSSSFFSETLNLKECGQLCLSKCSCTAYANLYVDGSGCLLWFVELVDIIQYSERGQDLYVRLAASDIDSVKKMERSNKDKRLVGIIIICGVLVMIIFLFLGHLTYKQSDSRRKREKVHNQDYRCGQRKEEVDWPTFDFQTIVNATANFSSDNKVGEGGFGPVYKGTLIDGQEIAVKRLSINSGQGLNELRNEVNTIAKLQHRNLVKLFGCCLEEEEKMLVYEYVPNKSLDSFIFDQTRRKLLDWPTRMHIIVGIARGLLYLHQDSRMRIIHRDLKASNILLDANMNPKISDFGLAKAFGGDQTEAKTNRIVGTYGYMPPEYAVHGKFSVKSDVFSFGVLALEILSGKKNRDFSDPNHSLNLLGHSWRLWVEQRHLELIDDSLSNASDETEILRCIHIALLCVQQSPEDRPDMLSVVVMLTSDSNLPKPKQPAFYVERNCYNKGFLASNQNTCSENEVTISVVEAR 872
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g02648 872 Pfam S-locus glycoprotein domain 261 371 IPR000858 GO:0048544
Arst8g02648 872 ProSiteProfiles PAN/Apple domain profile. 392 470 IPR003609 -
Arst8g02648 872 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 519 630 - -
Arst8g02648 872 CDD B_lectin 84 202 IPR001480 -
Arst8g02648 872 Pfam PAN-like domain 392 455 IPR003609 -
Arst8g02648 872 SMART ntp_6 392 469 IPR003609 -
Arst8g02648 872 Pfam Protein tyrosine and serine/threonine kinase 558 824 IPR001245 GO:0004672|GO:0006468
Arst8g02648 872 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 65 817 - -
Arst8g02648 872 SUPERFAMILY alpha-D-mannose-specific plant lectins 124 233 IPR036426 -
Arst8g02648 872 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 72 199 - -
Arst8g02648 872 CDD STKc_IRAK 561 827 - -
Arst8g02648 872 ProSitePatterns Serine/Threonine protein kinases active-site signature. 676 688 IPR008271 GO:0004672|GO:0006468
Arst8g02648 872 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 631 834 - -
Arst8g02648 872 SMART serkin_6 555 826 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g02648 872 Pfam Domain of unknown function (DUF3403) 827 872 IPR021820 GO:0004674
Arst8g02648 872 PIRSF SRK 49 872 IPR024171 GO:0004674
Arst8g02648 872 Gene3D Transferase(Phosphotransferase) domain 1 631 839 - -
Arst8g02648 872 SUPERFAMILY Protein kinase-like (PK-like) 539 826 IPR011009 -
Arst8g02648 872 Pfam D-mannose binding lectin 123 228 IPR001480 -
Arst8g02648 872 ProSiteProfiles Bulb-type lectin domain profile. 76 196 IPR001480 -
Arst8g02648 872 Gene3D Phosphorylase Kinase; domain 1 513 630 - -
Arst8g02648 872 CDD PAN_AP_plant 388 470 - -
Arst8g02648 872 SMART blect_4 82 202 IPR001480 -
Arst8g02648 872 Gene3D - 72 199 IPR036426 -
Arst8g02648 872 ProSiteProfiles Protein kinase domain profile. 555 840 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g02648 Arst-Chr8 36348713 36352614 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g02648 471 841 Receptor kinase-like Gene Family AT4G23190 50.933 3.95e-124 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Arst8g02648 PK_Tyr_Ser-Thr 2.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g02648 - - ahf:112707324 1746.48