Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g02647 ATGATGTCCCGAGAAAGAGACAAATTCCTCAATAGCGCTTCCAGATTTAATGGACCTTGCAGCTTGGAGCAATCGTTTTATGGTATCACCGTTTATATAATTAACTATGATTTTTCAATCAAATTTAGACTACCCAGTACCTGCCCTTTAAGCAAAACCATGAGAAGCCTTGTGTCACTTTTTGTGACTTCTCTTTTCGCTTCATTCTTATCAAGCTTCTCAGCTCTAGACATTCTTACTACACATAAACTCATCAAAGATGGTGACAAGTTAGTTTCCGCAAGAGGGACCTTTGAACTGGGATTCTTCAGCCCTGGTAACTCCAGAAACCGGTATTTGGGAATATGGTACGTGGCTTCACCTAGAACTCCTATATGGGTTGCAAATAGAGAAGCTCCTATTAGAGATGGTTCAGGAATTCTCAGGATCACTAAGGGGGGTATCCTTAACCTTATTAATATCACAGGTAATATTGTTTGGTCATCAAATGCATATGCAACTGCAGAAGATGCATTTGCACAGCTTCTGGAATCAGGGAATCTTGTGGTGAGAGCCTCTAATGGTAGAACCACAGAATCCTATTTGTGGCAGAGTTTTGATTATCCTTGTGACACATATATGCCTGGAATGAAGATTGGGAAGAACCTAGTTACTGGTTTGGAGACATTCTTAACATCTTGGAAGAGTAAAGATGACCCTGCCCCTGGTAAGTACTCAATTCATCTTGATACTCATGGTTGGCCACAGGTGGTTATAAGAAAAGGAACCACTATAGTGTCACGATTTGGATCGTGGAATGGTCTTGAGTTGACAGGAAATCCAGCAAGGTCAGAAGCATCACTGGTCTTTCAATTCACATATAGTGAAAGTGAAGTTTATGTGGGTTACCAACTCAGGAAGAGTTCTGGGTTGTCTATGTTGTCAAGAGATGTACTGCATCCATCAGGCAACATGCAGCGATTCGTATGGATCAATCGGATCCAGAATTGGGCACTCTCCTCAACATCTCTGTCAAATCAGTGCCAACATTATGCATGGTGTGGTGCTAATGCCGTCTGCAATAACAATAACTTCCCTATTTGTGGATGCTTGACCGGGTTCAGTCCTAAGTCTCCAAAAGATTGGAATAATGGGAACTGGTTTACTGGATGTGAACGCAGGACGAACTTGAATTGCCATGATGATGGCTTCTTGAGGTACACAGGAGTTAAATTGCCTAATACCTCCTCATCATTTTTCAGTGAAACCTTGAATCTTAAAGAATGTGGTCAATTGTGCTTAAGTAAATGTTCGTGTACTGCATATGCAAACTTATATGTTGATGGAAGTGGTTGCTTGCTTTGGTTTGTCGAACTGGTGGATATAATCCAATATAGCGAGCGTGGTCAAGACCTTTATGTAAGGCTAGCTGCTTCAGACATTGATAGTGTAAAGAAAATGGAGCGATCCAACAAAGACAAAAGACTAGTGGGTATCATAATTATATGTGGTGTTTTGGTCATGATTATCTTCCTCTTTCTGGGACACTTAACCTATAAACAAAGTGACAGCAGAAGAAAGAGAGTGGCAGAGAAAGTTCACAACCAGGATTACAGATGTGGACAAAGAAAGGAAGAGGTGGACTGGCCAACATTTGATTTTCAAACTATAGTTAATGCAACAGCCAACTTTTCTAGTGATAACAAGGTGGGAGAAGGTGGATTTGGCCCTGTTTACAAGGGCACATTAATTGATGGACAAGAAATAGCTGTGAAGAGGCTCTCCATAAATTCTGGCCAAGGACTAAATGAATTGAGAAATGAAGTCAATACAATTGCTAAGCTTCAGCACCGTAATCTTGTTAAGCTTTTTGGTTGTTGTCTTGAGGAGGAAGAGAAAATGTTAGTATATGAATATGTGCCTAACAAAAGCTTGGACTCCTTTATATTTGACCAAACAAGGAGAAAATTACTAGATTGGCCAACACGCATGCATATTATTGTTGGCATTGCTCGTGGGCTTCTTTATCTTCATCAAGACTCTAGAATGAGGATTATTCACAGGGACCTCAAAGCTAGCAATATTCTTCTAGATGCCAATATGAATCCAAAAATCTCTGACTTTGGGCTTGCGAAGGCCTTTGGGGGAGATCAAACTGAGGCGAAAACTAATCGGATAGTTGGGACATATGGTTATATGCCTCCTGAGTATGCAGTTCATGGGAAATTTTCTGTGAAGTCAGATGTCTTTAGCTTTGGAGTTTTGGCACTGGAGATACTAAGCGGCAAGAAGAATAGAGATTTCAGCGACCCGAATCATAGCCTTAATCTTCTTGGACATAGCTGGAGATTGTGGGTTGAGCAGAGACACTTAGAACTGATTGATGATTCATTAAGCAACGCTTCTGATGAAACTGAAATACTTAGATGCATACATATTGCTCTATTATGTGTGCAACAAAGTCCGGAAGACAGGCCAGACATGCTTTCTGTGGTTGTAATGTTAACTAGTGATAGCAATCTCCCTAAGCCAAAACAGCCTGCATTTTATGTGGAAAGGAATTGTTACAATAAAGGCTTTCTAGCAAGTAATCAGAACACATGTTCTGAAAATGAAGTTACAATCTCAGTGGTAGAGGCAAGGTAG 2625 0.4053 MMSRERDKFLNSASRFNGPCSLEQSFYGITVYIINYDFSIKFRLPSTCPLSKTMRSLVSLFVTSLFASFLSSFSALDILTTHKLIKDGDKLVSARGTFELGFFSPGNSRNRYLGIWYVASPRTPIWVANREAPIRDGSGILRITKGGILNLINITGNIVWSSNAYATAEDAFAQLLESGNLVVRASNGRTTESYLWQSFDYPCDTYMPGMKIGKNLVTGLETFLTSWKSKDDPAPGKYSIHLDTHGWPQVVIRKGTTIVSRFGSWNGLELTGNPARSEASLVFQFTYSESEVYVGYQLRKSSGLSMLSRDVLHPSGNMQRFVWINRIQNWALSSTSLSNQCQHYAWCGANAVCNNNNFPICGCLTGFSPKSPKDWNNGNWFTGCERRTNLNCHDDGFLRYTGVKLPNTSSSFFSETLNLKECGQLCLSKCSCTAYANLYVDGSGCLLWFVELVDIIQYSERGQDLYVRLAASDIDSVKKMERSNKDKRLVGIIIICGVLVMIIFLFLGHLTYKQSDSRRKRVAEKVHNQDYRCGQRKEEVDWPTFDFQTIVNATANFSSDNKVGEGGFGPVYKGTLIDGQEIAVKRLSINSGQGLNELRNEVNTIAKLQHRNLVKLFGCCLEEEEKMLVYEYVPNKSLDSFIFDQTRRKLLDWPTRMHIIVGIARGLLYLHQDSRMRIIHRDLKASNILLDANMNPKISDFGLAKAFGGDQTEAKTNRIVGTYGYMPPEYAVHGKFSVKSDVFSFGVLALEILSGKKNRDFSDPNHSLNLLGHSWRLWVEQRHLELIDDSLSNASDETEILRCIHIALLCVQQSPEDRPDMLSVVVMLTSDSNLPKPKQPAFYVERNCYNKGFLASNQNTCSENEVTISVVEAR 874
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g02647 874 Gene3D Phosphorylase Kinase; domain 1 516 632 - -
Arst8g02647 874 Pfam D-mannose binding lectin 123 228 IPR001480 -
Arst8g02647 874 Pfam S-locus glycoprotein domain 261 371 IPR000858 GO:0048544
Arst8g02647 874 ProSiteProfiles Protein kinase domain profile. 557 842 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g02647 874 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 65 819 - -
Arst8g02647 874 ProSiteProfiles PAN/Apple domain profile. 392 470 IPR003609 -
Arst8g02647 874 CDD B_lectin 84 202 IPR001480 -
Arst8g02647 874 Gene3D - 72 199 IPR036426 -
Arst8g02647 874 Pfam PAN-like domain 392 455 IPR003609 -
Arst8g02647 874 SUPERFAMILY Protein kinase-like (PK-like) 541 828 IPR011009 -
Arst8g02647 874 SMART ntp_6 392 469 IPR003609 -
Arst8g02647 874 SUPERFAMILY alpha-D-mannose-specific plant lectins 124 233 IPR036426 -
Arst8g02647 874 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 72 199 - -
Arst8g02647 874 SMART serkin_6 557 828 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g02647 874 Pfam Protein tyrosine and serine/threonine kinase 560 826 IPR001245 GO:0004672|GO:0006468
Arst8g02647 874 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 520 632 - -
Arst8g02647 874 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 633 836 - -
Arst8g02647 874 CDD STKc_IRAK 563 829 - -
Arst8g02647 874 ProSitePatterns Serine/Threonine protein kinases active-site signature. 678 690 IPR008271 GO:0004672|GO:0006468
Arst8g02647 874 Gene3D Transferase(Phosphotransferase) domain 1 633 841 - -
Arst8g02647 874 ProSiteProfiles Bulb-type lectin domain profile. 76 196 IPR001480 -
Arst8g02647 874 PIRSF SRK 49 874 IPR024171 GO:0004674
Arst8g02647 874 CDD PAN_AP_plant 388 470 - -
Arst8g02647 874 SMART blect_4 82 202 IPR001480 -
Arst8g02647 874 Pfam Domain of unknown function (DUF3403) 829 874 IPR021820 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g02647 Arst-Chr8 36348712 36352615 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g02647 485 842 Receptor kinase-like Gene Family AT4G05200 53.482 2.32e-125 392
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Arst8g02647 PK_Tyr_Ser-Thr 2.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g02647 - - ahf:112707324 1754.57