Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g02643 ATGCCGGCGACACAATGTGATAAGTATGCAGTGTGTGGCGCAAATTCTATCTGTAGTGTCTTTAACACTGCATTTCCAACTTGCGCATGCCTGAACGGATTTGTACCAAATTATCCTGAAAAATGGAAGGAATCACATTGGTCTGATGGTTGTGTTAGGATCACTCCATTGAGCTGCAGCAAAGATGGATTTAAGAAGCTCACAAACATGGTGCTACCTGACACATCTTCTTCCTGGTACAATAAGACCATGACCTTGCAAGAATGTGAGGATTTGTGTCTGAAAAATTGTTCTTGCACAGCATATGCTAATTTGGATATCCGCGGCCGAGGAAGTGGGTGCTTAATTTGGTTTCACGATCTCATTGACATGAAAGAAGGGGTAAATGAACTTTATATCCGAACAACTATTTCAGATCTAGAAGATAATCAGAACAATGATTCCAGCAAGAAGAAGCTAGCAGGAATCCTCGATGGATCCGCATTGTTTGTCATGTGCTTAGTACTTGGACTGGCAATCTATGTATGGAGAAACAAACCTAAGAAGCCAGAAATATTCTGCTGGAAGCAACATGCTTGCAAAATAGAAAATGAGGATGTTGATCTTCCAAGCTTTGAGTTATCAACCATAGCTTCTGCCACTAATCACTTCTCTAGTGGCAACAAATTAGGTGAAGGTGGATTTGGACCTGTGTACAAGGGTGTACTCGCAAATGGGGTAGAGATTGCTGTCAAGAGGCTTTCCAAGAATTCTCAGCAAGGACTGCAGGAGTTCAAAACTGAAGTTCAGTTAATTGCTAAACTTCAGCATCGCAATCTTGTAAAACTTCTTGGTTGTTGCATTCAACAAAAAGAGAAGCTCTTGATTTATGAGTTCATGCCCAATAGGAGTTTGGACTACTTCATTTTTGATGATTCTAGAAGAAAATTATTGGATTGGGGCAAGCGATTTCAAATTATTGGCGGGACAGCTCGAGGCCTAGTCTATCTACATCAAGACTCTAGGCTAAGAGTCATTCATAGAGACTTGAAAACGAGCAATATCCTTCTTGATAAGGGTATAGATCCTAAAATATCAGACTTTGGCCTTGCTAGGACATTTGGAGGAGATCAAACTGTGGCGAATACAAAGCGAGTCATGGGAACTCATGGTTATATCTCTCCGGAGTATGCAGTGCGTGGTTCTTTCTCAATGAAATCCGATGTGTTCAGCTTTGGTGTAATCGTACTTGAGGTAGTGAGTGCGAAGAGGAACAGGGAATTCTCAATTCCACACCAAGATCTGAACCTTCTTGGATATGCATGGAAATTGTGGACTGAAGGAAGGTCTCTGGAGCTGGTAGATGAATCACTTGGTGATTCAGTTGATGAAGCTCAAGTGTTGAGATGCATTCACATAGGGCTTTTGTGTGTGCAAGAGAGACCAGAAGACAGGCCTAGCATGTCATCAGTAATCCATATGCTCAATGATGATAAGCTGCTTGCTCGGCCAAAGCAGCCAGCATTTTATCCTCACCAAGAAAGTAGTTCTTCAACCATAAACAATGAAATCTGTTCAAAAAATGATGTTTCCATCACATTGTTAGAGGCAAGATAG 1596 0.4142 MPATQCDKYAVCGANSICSVFNTAFPTCACLNGFVPNYPEKWKESHWSDGCVRITPLSCSKDGFKKLTNMVLPDTSSSWYNKTMTLQECEDLCLKNCSCTAYANLDIRGRGSGCLIWFHDLIDMKEGVNELYIRTTISDLEDNQNNDSSKKKLAGILDGSALFVMCLVLGLAIYVWRNKPKKPEIFCWKQHACKIENEDVDLPSFELSTIASATNHFSSGNKLGEGGFGPVYKGVLANGVEIAVKRLSKNSQQGLQEFKTEVQLIAKLQHRNLVKLLGCCIQQKEKLLIYEFMPNRSLDYFIFDDSRRKLLDWGKRFQIIGGTARGLVYLHQDSRLRVIHRDLKTSNILLDKGIDPKISDFGLARTFGGDQTVANTKRVMGTHGYISPEYAVRGSFSMKSDVFSFGVIVLEVVSAKRNREFSIPHQDLNLLGYAWKLWTEGRSLELVDESLGDSVDEAQVLRCIHIGLLCVQERPEDRPSMSSVIHMLNDDKLLARPKQPAFYPHQESSSSTINNEICSKNDVSITLLEAR 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g02643 531 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 293 496 - -
Arst8g02643 531 CDD PAN_AP_plant 55 135 - -
Arst8g02643 531 ProSiteProfiles Protein kinase domain profile. 217 494 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g02643 531 Pfam Protein tyrosine and serine/threonine kinase 219 488 IPR001245 GO:0004672|GO:0006468
Arst8g02643 531 Gene3D Transferase(Phosphotransferase) domain 1 293 499 - -
Arst8g02643 531 SMART ntp_6 59 136 IPR003609 -
Arst8g02643 531 Gene3D Hepatocyte Growth Factor 57 133 - -
Arst8g02643 531 CDD STKc_IRAK 223 489 - -
Arst8g02643 531 Pfam S-locus glycoprotein domain 2 37 IPR000858 GO:0048544
Arst8g02643 531 Gene3D Phosphorylase Kinase; domain 1 184 292 - -
Arst8g02643 531 SUPERFAMILY Protein kinase-like (PK-like) 200 511 IPR011009 -
Arst8g02643 531 ProSitePatterns Serine/Threonine protein kinases active-site signature. 338 350 IPR008271 GO:0004672|GO:0006468
Arst8g02643 531 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 16 509 - -
Arst8g02643 531 ProSiteProfiles PAN/Apple domain profile. 59 136 IPR003609 -
Arst8g02643 531 SMART serkin_6 217 494 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g02643 531 Pfam PAN-like domain 59 124 IPR003609 -
Arst8g02643 531 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 182 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g02643 Arst-Chr8 36323918 36326273 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g02643 167 531 Receptor kinase-like Gene Family AT3G45860 50.131 3.04e-126 382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Arst8g02643 PK_Tyr_Ser-Thr 1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g02643 - - aip:107611884 772.696