Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g02628 ATGGAACGGTTCACCTTGCTTCTGTTATGCTTCTCATTGCTGCATCATACAGCTATTTCTACAATCATAGACACTATTAGTACTACACAGTACCTCACTGATGGTGACACCATGCTTTCAGCTGATGAAAACTTTGCAATTGGATTCTTCGGTATACCAGAAAGTTCCATGAACCGTTACCTTGGAATATGGTACTATAAAGTGCCAACTAGGACAGTGGCATGGGTTGCCAACAGAAACACTCCACTTAATGACTCATCTGGAATCTTGAAGATCACTGACAAAGGAATTCTTGCTCTTCATAGTCATAACAATACCATCATTTGGCATTCCAACTCCTCAAGATTCGTGCAGCGACCGGTTGCAGTGCTTTTGGATTCAGGGAACCTCATTGTGAAGGAATATGGGAGCAACAACAATGACTTAAAAAGCTTTCTTTGGCAGAGTTTCGATTACCCTTTTGACACAATGCTGCCAGGGATGAAGTTCGGAAGCGACTTAAGTACAGGTTTGAATAGGTACTTAACATCTCAAATTAGCCCCGATGATCCTTCTAAAGGTAACTATACTTTTCAGCTTGATATTGTTGGATATCCAGAATTATGTATAAGAAATGGTGAATCCAAGTCCTTTTCTAGTGGATCCTGGAATGGTCTTCGATTTGGTGGAATTCCCCGGTTAAAACAGAATGCTATATACAACTACTACTTTGTTTACAGTAAGGAAGAGATATATTATACATTTGAGCTTCTTAATAGCTCAATGTATTCAAGATTTGTGCTATCTGCGGATGGAATCATGACACGTTATGTTTGGAGTTTGAGGATACAAAGTTGGACACCCTACCTAACATTGCCAAATGATATCTGTGATAGTTATGGTAAATGTGGACCATATGGTAAATGTAATATAGACAACTCCCCTCCATGTGATTGCTTGAGCGGAACTGTACCTAAAGTCCCTGAAGAATGGAATCAGGCAGATTGGTATAATGGTTGTATTAGAAGTAATCCGCTAAGTTGCCATGGAGATGGATTCAAAAAGTTTACTGGTCTGAAGCTGCCTGATACACAGAAAGCATCATGGTTAAATACTAGCATGAGTCTTGACGAGTGCGCGAAGTTCTGCCTGAAAAATTGCTCCTGCATGGCTTATGCTGCATTGGATATCAGCAACGGGGCAAGTGGGTGTTTAATGTGGCATGATGAGCTGATAGATATTAGAGTCCTGAGTGATCCACAACAAGATCTTTATGTCAGAATGTCCAAGAAAGATTCAGATGAAGATGAAAAGTCAAAGGGTAGATCTGATATCCCGAAGATGCAGATTATTGTTTCCAGCTCAGTCTTATTTATAGGAATGATGATGATCCTATGCATTTCCTTGATCCTGTATAGAAGAAAGAAAAACCAGAAAAACTATAGGAACATGAGAGGCAACCCAGAAGAGCATCAGGAGGAAGAACTAGATCTACCATATTTTGATATGGCTACACTTATTTCTGCAACCAACAACTTCTCCACCAATAACATATTGGGAAAAGGCGGTTTTGGAGCTGTTTACAAGGGTGTGTTGGAAGATGGAAGAGAAATAGCAGTTAAGAGGCTTTCAGAAGATTCTAGACAAGGTCTTCAAGAGTTCAAAAGTGAAGTTATGCATGTAGTCAAACTTCAGCACAGGAATTTGGTGAGGCTTCTAGGATGTTGCATTCAAGCAGAGGAGAGGATTCTAGTCTATGAGTTTATGCCAAATAAAAGCTTGGACTACTTCATATTTGATGAAGACAGAGGCAAGATATTAGACTGGCCTAAGCGGTTCATTATTATAATTGGGATTGCACGAGGCCTTCTCTACCTCCATCAAGATTCAAGACATAGAATAGTCCATAGAGATCTTAAGGCTGGCAATGTTTTGTTAGATGAGGAAATAAATGCGAAAATCTCTGACTTTGGACTAGCCAGAACCCTTGTAGGAAATGAAAATGAAGCAAACACGGCAACTGTTGTCGGAACTTATGGCTATCTATCTCCAGAGTACCTTATCGATGGAATATTCTCAACAAAATCTGATGTCTATAGCTTCGGAGTGCTGGTGTTAGAGATAGTTACTGGAAAGAGAAATAGAGGCTTCAACAATAAAAATCATGGTTTTAATCTTCTCGGACATGTTTGGACTCTCTTCATAGATGGTAAGTGTTTAGAAATAGTTGATGGATCAATCAGAGATGATGACGCATCGAATTTATGTGGAGTGATAAGAGCGATTCATGTTGGTCTACTATGCGTTCAAAGAAGTCCAGAGGATAGGCCAAGCATGTCACATGCGCTTATGATGTTGAGTAGTGAATGGCGACTGCCTCGACCGAAAATGCCAGGCTTCTTTACTGAGAGAGATCCTGTTGGTGACACTTCTTCATCAGGCAACACTAAAGTAGTGTCAATTAATGAAGTCACAATTAGTGAGCTGGATCCAAGGTAG 2478 0.4003 MERFTLLLLCFSLLHHTAISTIIDTISTTQYLTDGDTMLSADENFAIGFFGIPESSMNRYLGIWYYKVPTRTVAWVANRNTPLNDSSGILKITDKGILALHSHNNTIIWHSNSSRFVQRPVAVLLDSGNLIVKEYGSNNNDLKSFLWQSFDYPFDTMLPGMKFGSDLSTGLNRYLTSQISPDDPSKGNYTFQLDIVGYPELCIRNGESKSFSSGSWNGLRFGGIPRLKQNAIYNYYFVYSKEEIYYTFELLNSSMYSRFVLSADGIMTRYVWSLRIQSWTPYLTLPNDICDSYGKCGPYGKCNIDNSPPCDCLSGTVPKVPEEWNQADWYNGCIRSNPLSCHGDGFKKFTGLKLPDTQKASWLNTSMSLDECAKFCLKNCSCMAYAALDISNGASGCLMWHDELIDIRVLSDPQQDLYVRMSKKDSDEDEKSKGRSDIPKMQIIVSSSVLFIGMMMILCISLILYRRKKNQKNYRNMRGNPEEHQEEELDLPYFDMATLISATNNFSTNNILGKGGFGAVYKGVLEDGREIAVKRLSEDSRQGLQEFKSEVMHVVKLQHRNLVRLLGCCIQAEERILVYEFMPNKSLDYFIFDEDRGKILDWPKRFIIIIGIARGLLYLHQDSRHRIVHRDLKAGNVLLDEEINAKISDFGLARTLVGNENEANTATVVGTYGYLSPEYLIDGIFSTKSDVYSFGVLVLEIVTGKRNRGFNNKNHGFNLLGHVWTLFIDGKCLEIVDGSIRDDDASNLCGVIRAIHVGLLCVQRSPEDRPSMSHALMMLSSEWRLPRPKMPGFFTERDPVGDTSSSGNTKVVSINEVTISELDPR 825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g02628 825 Pfam D-mannose binding lectin 72 177 IPR001480 -
Arst8g02628 825 Pfam Protein tyrosine and serine/threonine kinase 508 774 IPR001245 GO:0004672|GO:0006468
Arst8g02628 825 ProSitePatterns Protein kinases ATP-binding region signature. 512 534 IPR017441 GO:0005524
Arst8g02628 825 PIRSF SRK 1 825 IPR024171 GO:0004674
Arst8g02628 825 CDD PAN_AP_plant 338 420 - -
Arst8g02628 825 Pfam Domain of unknown function (DUF3403) 781 825 IPR021820 GO:0004674
Arst8g02628 825 Pfam PAN-like domain 341 407 IPR003609 -
Arst8g02628 825 Gene3D Transferase(Phosphotransferase) domain 1 582 785 - -
Arst8g02628 825 ProSiteProfiles Bulb-type lectin domain profile. 23 145 IPR001480 -
Arst8g02628 825 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 8 770 - -
Arst8g02628 825 SMART blect_4 29 153 IPR001480 -
Arst8g02628 825 ProSitePatterns Serine/Threonine protein kinases active-site signature. 627 639 IPR008271 GO:0004672|GO:0006468
Arst8g02628 825 Pfam S-locus glycoprotein domain 211 319 IPR000858 GO:0048544
Arst8g02628 825 Gene3D - 18 150 IPR036426 -
Arst8g02628 825 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 468 581 - -
Arst8g02628 825 CDD B_lectin 29 153 IPR001480 -
Arst8g02628 825 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 183 IPR036426 -
Arst8g02628 825 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 582 786 - -
Arst8g02628 825 CDD STKc_IRAK 512 779 - -
Arst8g02628 825 ProSiteProfiles PAN/Apple domain profile. 341 422 IPR003609 -
Arst8g02628 825 Gene3D Hepatocyte Growth Factor 339 420 - -
Arst8g02628 825 Gene3D Phosphorylase Kinase; domain 1 466 581 - -
Arst8g02628 825 ProSiteProfiles Protein kinase domain profile. 506 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g02628 825 SMART serkin_6 506 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g02628 825 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 18 150 - -
Arst8g02628 825 SMART ntp_6 341 421 IPR003609 -
Arst8g02628 825 SUPERFAMILY Protein kinase-like (PK-like) 487 779 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g02628 Arst-Chr8 36095460 36099391 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g02628 455 825 Receptor kinase-like Gene Family AT3G45860 50.000 2.35e-113 358
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Arst8g02628 PK_Tyr_Ser-Thr 9.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g02628 - - ahf:112769711 1238.79