Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g02627 ATGGAACGGTTCACCTTGCTTCTGTTATGCTTCTCATTGCTGCATCATACAGCTATTTCTACAATCATAGACACTATTAGTACTACACAGTACCTCACTGATGGTGACACCATGCTTTCAGCTGATGAAAACTTTGCAATTGGATTCTTCGGTATACCAGAAAGTTCCATGAACCGTTACCTTGGAATATGGTACTATAAAGTGCCAACTAGGACAGTGGCATGGGTTGCCAACAGAAACACTCCACTTAATGACTCATCTGGAATCTTGAAGATCACTGACAAAGGAATTCTTGCTCTTCATAGTCATAACAATACCATCATTTGGCATTCCAACTCCTCAAGATTCGTGCAGCGACCGGTTGCAGTGCTTTTGGATTCAGGGAACCTCATTGTGAAGGAATATGGGAGCAACAACAATGACTTAAAAAGCTTTCTTTGGCAGAGTTTCGATTACCCTTTTGACACAATGCTGCCAGGGATGAAGTTCGGAAGCGACTTAAGTACAGGTTTGAATAGGTACTTAACATCTCAAATTAGCCCCGATGATCCTTCTAAAGGTAACTATACTTTTCAGCTTGATATTGTTGGATATCCAGAATTATGTATAAGAAATGGTGAATCCAAGTCCTTTTCTAGTGGATCCTGGAATGGTCTTCGATTTGGTGGAATTCCCCGGTTAAAACAGAATGCTATATACAACTACTACTTTGTTTACAGTAAGGAAGAGATATATTATACATTTGAGCTTCTTAATAGCTCAATGTATTCAAGATTTGTGCTATCTGCGGATGGAATCATGACACGTTATGTTTGGAGTTTGAGGATACAAAGTTGGACACCCTACCTAACATTGCCAAATGATATCTGTGATAGTTATGGTAAATGTGGACCATATGGTAAATGTAATATAGACAACTCCCCTCCATGTGATTGCTTGAGCGGAACTGTACCTAAAGTCCCTGAAGAATGGAATCAGGCAGATTGGTATAATGGTTGTATTAGAAGTAATCCGCTAAGTTGCCATGGAGATGGATTCAAAAAGTTTACTGGTCTGAAGCTGCCTGATACACAGAAAGCATCATGGTTAAATACTAGCATGAGTCTTGACGAGTGCGCGAAGTTCTGCCTGAAAAATTGCTCCTGCATGGCTTATGCTGCATTGGATATCAGCAACGGGGCAAGTGGGTGTTTAATGTGGCATGATGAGCTGATAGATATTAGAGTCCTGAGTGATCCACAACAAGATCTTTATGTCAGAATGTCCAAGAAAGATTCAGATGAAGATGAAAAGTCAAAGGGTAGATCTGATATCCCGAAGATGCAGATTATTGTTTCCAGCTCAGTCTTATTTATAGGAATGATGATGATCCTATGCATTTCCTTGATCCTGTATAGAAGAAAGAAAAACCAGAAAAACTATAGGAACATGAGAGGCAACCCAGAAGAGCATCAGGAGGAAGAACTAGATCTACCATATTTTGATATGGCTACACTTATTTCTGCAACCAACAACTTCTCCACCAATAACATATTGGGAAAAGGCGGTTTTGGAGCTGTTTACAAGGGTGTGTTGGAAGATGGAAGAGAAATAGCAGTTAAGAGGCTTTCAGAAGATTCTAGACAAGGTCTTCAAGAGTTCAAAAGTGAAGTTATGCATGTAGTCAAACTTCAGCACAGGAATTTGGTGAGGCTTCTAGGATGTTGCATTCAAGCAGAGGAGAGGATTCTAGTCTATGAGTTTATGCCAAATAAAAGCTTGGACTACTTCATATTTGACAGAGGCAAGATATTAGACTGGCCTAAGCGGTTCATTATTATAATTGGGATTGCACGAGGCCTTCTCTACCTCCATCAAGATTCAAGACATAGAATAGTCCATAGAGATCTTAAGGCTGGCAATGTTTTGTTAGATGAGGAAATAAATGCGAAAATCTCTGACTTTGGACTAGCCAGAACCCTTGTAGGAAATGAAAATGAAGCAAACACGGCAACTGTTGTCGGAACTTATGGCTATCTATCTCCAGAGTACCTTATCGATGGAATATTCTCAACAAAATCTGATGTCTATAGCTTCGGAGTGCTGGTGTTAGAGATAGTTACTGGAAAGAGAAATAGAGGCTTCAACAATAAAAATCATGGTTTTAATCTTCTCGGACATGTTTGGACTCTCTTCATAGATGGTAAGTGTTTAGAAATAGTTGATGGATCAATCAGAGATGATGACGCATCGAATTTATGTGGAGTGATAAGAGCGATTCATGTTGGTCTACTATGCGTTCAAAGAAGTCCAGAGGATAGGCCAAGCATGTCACATGCGCTTATGATGTTGAGTAGTGAATGGCGACTGCCTCGACCGAAAATGCCAGGCTTCTTTACTGAGAGAGATCCTGTTGGTGACACTTCTTCATCAGGCAACACTAAAGTAGTGTCAATTAATGAAGTCACAATTAGTGAGCTGGATCCAAGGTAG 2472 0.4005 MERFTLLLLCFSLLHHTAISTIIDTISTTQYLTDGDTMLSADENFAIGFFGIPESSMNRYLGIWYYKVPTRTVAWVANRNTPLNDSSGILKITDKGILALHSHNNTIIWHSNSSRFVQRPVAVLLDSGNLIVKEYGSNNNDLKSFLWQSFDYPFDTMLPGMKFGSDLSTGLNRYLTSQISPDDPSKGNYTFQLDIVGYPELCIRNGESKSFSSGSWNGLRFGGIPRLKQNAIYNYYFVYSKEEIYYTFELLNSSMYSRFVLSADGIMTRYVWSLRIQSWTPYLTLPNDICDSYGKCGPYGKCNIDNSPPCDCLSGTVPKVPEEWNQADWYNGCIRSNPLSCHGDGFKKFTGLKLPDTQKASWLNTSMSLDECAKFCLKNCSCMAYAALDISNGASGCLMWHDELIDIRVLSDPQQDLYVRMSKKDSDEDEKSKGRSDIPKMQIIVSSSVLFIGMMMILCISLILYRRKKNQKNYRNMRGNPEEHQEEELDLPYFDMATLISATNNFSTNNILGKGGFGAVYKGVLEDGREIAVKRLSEDSRQGLQEFKSEVMHVVKLQHRNLVRLLGCCIQAEERILVYEFMPNKSLDYFIFDRGKILDWPKRFIIIIGIARGLLYLHQDSRHRIVHRDLKAGNVLLDEEINAKISDFGLARTLVGNENEANTATVVGTYGYLSPEYLIDGIFSTKSDVYSFGVLVLEIVTGKRNRGFNNKNHGFNLLGHVWTLFIDGKCLEIVDGSIRDDDASNLCGVIRAIHVGLLCVQRSPEDRPSMSHALMMLSSEWRLPRPKMPGFFTERDPVGDTSSSGNTKVVSINEVTISELDPR 823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g02627 823 ProSitePatterns Protein kinases ATP-binding region signature. 512 534 IPR017441 GO:0005524
Arst8g02627 823 ProSitePatterns Serine/Threonine protein kinases active-site signature. 625 637 IPR008271 GO:0004672|GO:0006468
Arst8g02627 823 CDD PAN_AP_plant 338 420 - -
Arst8g02627 823 CDD STKc_IRAK 512 777 - -
Arst8g02627 823 Pfam Protein tyrosine and serine/threonine kinase 508 772 IPR001245 GO:0004672|GO:0006468
Arst8g02627 823 Pfam PAN-like domain 341 407 IPR003609 -
Arst8g02627 823 Gene3D Phosphorylase Kinase; domain 1 466 581 - -
Arst8g02627 823 PIRSF SRK 1 823 IPR024171 GO:0004674
Arst8g02627 823 Gene3D Hepatocyte Growth Factor 339 420 - -
Arst8g02627 823 ProSiteProfiles Bulb-type lectin domain profile. 23 145 IPR001480 -
Arst8g02627 823 SMART blect_4 29 153 IPR001480 -
Arst8g02627 823 SMART serkin_6 506 782 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g02627 823 Pfam S-locus glycoprotein domain 211 319 IPR000858 GO:0048544
Arst8g02627 823 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 468 581 - -
Arst8g02627 823 Pfam Domain of unknown function (DUF3403) 779 823 IPR021820 GO:0004674
Arst8g02627 823 CDD B_lectin 29 153 IPR001480 -
Arst8g02627 823 ProSiteProfiles Protein kinase domain profile. 506 782 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g02627 823 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 183 IPR036426 -
Arst8g02627 823 SUPERFAMILY Protein kinase-like (PK-like) 487 777 IPR011009 -
Arst8g02627 823 Gene3D - 18 150 IPR036426 -
Arst8g02627 823 ProSiteProfiles PAN/Apple domain profile. 341 422 IPR003609 -
Arst8g02627 823 Gene3D Transferase(Phosphotransferase) domain 1 582 783 - -
Arst8g02627 823 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 8 768 - -
Arst8g02627 823 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 582 784 - -
Arst8g02627 823 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 18 150 - -
Arst8g02627 823 SMART ntp_6 341 421 IPR003609 -
Arst8g02627 823 Pfam D-mannose binding lectin 72 177 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g02627 Arst-Chr8 36095460 36099393 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g02627 468 823 Receptor kinase-like Gene Family AT4G23140 49.730 1.11e-111 354
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Arst8g02627 PK_Tyr_Ser-Thr 2.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g02627 - - ahf:112769711 1235.32