Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g02612 ATGGCAAACTCTTTCTTTAATATGCCAATTTCCGTCATCACTTTCTTCTTCTTCTTCTTCTTCTTCTACCTCCTTCTCTTTACCAGTGCTGCAAACAACACCATAACTCACTCCCAGTCTCTAACCGAAAACCAAACCTTACTTTCCATCAACACAACCTTCCAACTTGGTTTCTTCACTCCTAACAACTCTAAAAACCGCTACCTCGGCATATGGTACAACAATCTCCCGGTTCAAACCGTGGTATGGGTCGCCAACCGAGAGAAACCAATCACAACAAACATCCCTTCTGTTTTGAAGATAAACACCACACAAAACAGCACCACCCTTGTCGTCCTCCAGGACAACTCTGTTATATGGTCTACACCGCCGTCAAGACGCGCTTCGAATCCGGTTCTTCAGCTACTGGACTCAGGGAACCTTGTTTTGAGAGAACAAGATGATAAAAATGAAAAGAACTATTTATGGCAGAGTTTTGATTACCCTTCTGACACGCTTCTTTCAGGGATGAAGCTAGGGAAGAACTTGAAAACCGGCCTGGATCGACGCGTGACCGTGTGGAAAACCGTGGATGATCCTTCACTGGGAAACTTAACTTGGATGATGGAAGTTACAACCTGGCCACACCCAATACAAACAACAGGATCAAAGAAACAATTCGACAGTGGACCGTGGAATGGATTGGTCTACAGCAGCATGCCCACCAGAATTCGCCAACCAACTTTCGATTATGTCTATGTCTCCAATGAGGATGAAGTTTACTTCATGTTCCATCTTGTTAACAACTCTGTTCCAACAAGAATGGTGCTGGATGCAACTTCTTACAAGCGTCAGTACTCGGTTTGGGACTACGGTTCGCAAGAATGGAAGGTTTATAACTCGCTGCCGCGAGATTTTTGCGAGCAATACGGCGTTTGCGGCCCCAATGGGAACTGTGATTTGTCAAAGGTGCCTGCTCAGGCATGTGATTGTTTGAGAGGGTTTAGGCCCAAGTCGCCGGAAGAATGGAATCGACAGAACCGATCTGACGGTTGCTTGCGCGACAAGCCACTGAATTGCGGAGGCGATAAGTTTGTGAAGTATGAAAAGATGAAAGTGCCTGATACTGTGAATTGTTGGTACCTGAATGAGAGCATGAATCTTGATGAGTGCAGAACGAAATGTTTGGGGAATTGTTCTTGTGTGGCTTATACAAATTCGGATATTAGAGGTGAAGGTAGTGGCTGTGCTTTGTGGTCTGGTGATCTTTATGATTTGAGGATTTTACCAGATGCAGGCCAAGATTTGTACATTAGAGTGCCAGCTTCAGAGTTAGAGTCAAACAATGGACGCAAGGTCAAGATAGGAGTTGGTGTTGGAGTCTCAGTTGGCGTTTTATGTGGCCTTCTCTTAGCATTCTGTTTGATATGGAAAAGGCGAAAAAGGGCCACTCTGAAAGAGACTAATGCAGCATTAAAGGATCAGTCCAAGGAAGAACAAGAGGAAGATCCAGAGGTTCCATTATATGACCTATCAGTTATAGCTTCTTCCACTGATAACTTTTCAGATAAAAATAAGCTTGGAGAAGGTGGTTTTGGACCTGTGTTTAAGGGAACATTAGAAAATGGGCAAAGAATTGCAGTTAAGAGACTCTCAGTTAGTTCCGGACAAGGGATCAAGGAATTTAAGAATGAAATTGCCTTGATAGCCAAACTTCAGCATCGTAATCTTGTAAAACTTCATGGATATTGCATTCAAAATGAAGAGAAATTACTTATATACGAATATATGCCTAATAAAAGTTTGGACTTCTTTATATTTGATCAAACGCAAAGAACAGTATTGGATTGGCCAAGACGATTTCATATAATTTGTGGCATTGCAAGAGGTCTTCTTTATCTTCATCAAGATTCAAGACTTAGAATAATTCATAGAGATCTTAAAGCAAGTAATGTTTTACTAGACGATGAGATGAATCCTAAAATCTCAGACTTTGGATTAGCTAGAATTTTGGGAGGAGACCAAACTGCAGATTCTACACGTCGGGTGGTTGGAACTTATGGATACATAGCACCAGAATACGCGATAGATGGAAACTTCTCAATAAAATCAGACGTGTTTAGCTTTGGTGTTTTGCTGTTGGAGATAATATCAGGAAGGAAAAACAGAGAACACAATCAAAAAGAAAGTACAAGCCTTATTGGACATGCATGGAATTTGTGGATACAAGAGAGGCCATTGGACTTGGTTGGTGAATACCTGAAAGAATCTTGTAATGCTTCTGAAGTATTGCGTTGCATTCATATTAGTTTCCTGTGTCTGCAGCAGCATCCACATGACAGGCCAGAGATGTCATCTGTAATTTTGATGTTAGGTAGTGAAATTGGTTTGCCTAAGCCAAAACAACCAGCTCTATTTGTTAGAGAATATTCTTCTTCTAATAAGGAGTATTCTTCATCAAATAAGAGTAATTTAGCTTCTGTCAATGAATTAAGTATCTCCAATGTAGAAGCTCGTTAG 2499 0.413 MANSFFNMPISVITFFFFFFFFYLLLFTSAANNTITHSQSLTENQTLLSINTTFQLGFFTPNNSKNRYLGIWYNNLPVQTVVWVANREKPITTNIPSVLKINTTQNSTTLVVLQDNSVIWSTPPSRRASNPVLQLLDSGNLVLREQDDKNEKNYLWQSFDYPSDTLLSGMKLGKNLKTGLDRRVTVWKTVDDPSLGNLTWMMEVTTWPHPIQTTGSKKQFDSGPWNGLVYSSMPTRIRQPTFDYVYVSNEDEVYFMFHLVNNSVPTRMVLDATSYKRQYSVWDYGSQEWKVYNSLPRDFCEQYGVCGPNGNCDLSKVPAQACDCLRGFRPKSPEEWNRQNRSDGCLRDKPLNCGGDKFVKYEKMKVPDTVNCWYLNESMNLDECRTKCLGNCSCVAYTNSDIRGEGSGCALWSGDLYDLRILPDAGQDLYIRVPASELESNNGRKVKIGVGVGVSVGVLCGLLLAFCLIWKRRKRATLKETNAALKDQSKEEQEEDPEVPLYDLSVIASSTDNFSDKNKLGEGGFGPVFKGTLENGQRIAVKRLSVSSGQGIKEFKNEIALIAKLQHRNLVKLHGYCIQNEEKLLIYEYMPNKSLDFFIFDQTQRTVLDWPRRFHIICGIARGLLYLHQDSRLRIIHRDLKASNVLLDDEMNPKISDFGLARILGGDQTADSTRRVVGTYGYIAPEYAIDGNFSIKSDVFSFGVLLLEIISGRKNREHNQKESTSLIGHAWNLWIQERPLDLVGEYLKESCNASEVLRCIHISFLCLQQHPHDRPEMSSVILMLGSEIGLPKPKQPALFVREYSSSNKEYSSSNKSNLASVNELSISNVEAR 832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g02612 832 SMART serkin_6 514 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g02612 832 CDD STKc_IRAK 520 784 - -
Arst8g02612 832 Gene3D Phosphorylase Kinase; domain 1 474 589 - -
Arst8g02612 832 Pfam PAN-like domain 353 419 IPR003609 -
Arst8g02612 832 CDD B_lectin 38 162 IPR001480 -
Arst8g02612 832 Pfam Protein tyrosine and serine/threonine kinase 517 781 IPR001245 GO:0004672|GO:0006468
Arst8g02612 832 Coils Coil 471 495 - -
Arst8g02612 832 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 17 775 - -
Arst8g02612 832 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 479 589 - -
Arst8g02612 832 PIRSF SRK 5 832 IPR024171 GO:0004674
Arst8g02612 832 ProSitePatterns Serine/Threonine protein kinases active-site signature. 635 647 IPR008271 GO:0004672|GO:0006468
Arst8g02612 832 SMART ntp_6 353 433 IPR003609 -
Arst8g02612 832 SUPERFAMILY alpha-D-mannose-specific plant lectins 81 193 IPR036426 -
Arst8g02612 832 Gene3D - 26 159 IPR036426 -
Arst8g02612 832 SMART blect_4 38 162 IPR001480 -
Arst8g02612 832 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 590 791 - -
Arst8g02612 832 ProSiteProfiles PAN/Apple domain profile. 353 434 IPR003609 -
Arst8g02612 832 SUPERFAMILY Protein kinase-like (PK-like) 497 801 IPR011009 -
Arst8g02612 832 Pfam S-locus glycoprotein domain 221 332 IPR000858 GO:0048544
Arst8g02612 832 Gene3D Transferase(Phosphotransferase) domain 1 590 789 - -
Arst8g02612 832 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 28 159 - -
Arst8g02612 832 ProSiteProfiles Bulb-type lectin domain profile. 32 156 IPR001480 -
Arst8g02612 832 CDD PAN_AP_plant 350 434 - -
Arst8g02612 832 ProSiteProfiles Protein kinase domain profile. 514 798 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g02612 832 Pfam D-mannose binding lectin 80 188 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g02612 Arst-Chr8 35833805 35837589 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g02612 462 832 Receptor kinase-like Gene Family AT4G23150 50.798 8.47e-126 390
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Arst8g02612 PK_Tyr_Ser-Thr 8.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g02612 - - ahf:112769120 1623.6