Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g02566 ATGGATTCACAACAGCTATATAGTTTTGGTGTGACAAGTGCAGGACTACCTTATATTCCATCCTTCCCCACAATTCCGTCGTCGCAACCCAACAGGCTTCTTGGATCCTTGAAATTTGACACTGGGAACTCGCCCAATTCGCCCTTTTCGACTCATTTTGATTCTGATACTCTTTCAGCCTTTAGTGATAGCCAGGACCAGCAGCACAGCCCTGGAGAAATCCTATCCGGCGTCAGCACCTCGTGCAACTCGCCTTTCGAAACCAACCATTACTTGCATACATCAGTCTCGTCTGCAGACAGTAATAGGGGCAGTTTTCAACTCTATTCTGCCAGGAGCTCTCTTCTGCAGAATGCAAATTGTAACCAGAAAATTCGAAACGTGTTGCTGGAATTAGAATCTGCTCTGATGGCCCCGGACGAAGAAGAAGTCACTACATCGAATGCTTCCATGGTTGAGAGCAGTGGACCAACAACATCTGGCCAAAGAAACAGGTCATGGAGTCATGATCATTACGGCTCGCAATTTGTTCAGAGCCAGGGATCATATGTAACTGGAAGCAGGCAAACAAGTGAGTTTGAACATGTTATGAAGCGCCAGAAATCGATAGTGGAAGCATCATCGCCCCCAGGTTTCCCCTCGGGAAATTTGAAACAATTGCTGGTTGCTTGTGCAGAGGCCATGGCTGATGGCAACATGAATGATTTTGATCAATTGATATCAAAGGCTAAAGGTGCTGTATCTATAACCGGTGAGCCATTGCAACGGCTCGGTGCTTACATGGTAGAAGGGCTGGTTGCTAGGAAGGAAGCATCAGGGACCGGCATCTATCGCGCCCTTAAGTGCAGAGAGCCGGAAGGCAAAGACTTACTTTCATACATGCAAATGCTGTTTGAAATCTGTCCCTATCTGAAATTTGGTTACATGGCAGCCAATGGAGCCATAGCCGAAGCGTGCCGAGATGAGGATCACATACACATAATAGACTTTCAGATTGCTCAAGGAACTCAATGGATGACTCTCCTCCAAGCTCTCGCCGCGAGACCTCGAGGACCTCCCCATGTGAGGATCACAGGGATTGATGACCCTGTTTCCAGGTATGCTCGTGGCGAAGGACTAGAGGTAGTTGGGAAAAGGCTGGCCATGATGTCTGAGAAATTTCGCATCCCGGTGGAGTTTCATGGAGTGCCGGTTTATGCTCCGGATGTGACCAGAGACATGCTAAATATCAGGTCCGGAGAGGCTTTGGCTGTGAACTTTCCTTTGCAACTTCACCATACTGCTGATGAGAGTGTTGATGTGAATAACCCAAGAGATGGAATCCTTAGACTGGTGAAGTCGCTTTCGCCCAAGGTGGTAACATTGGTGGAGCAGGAATCAAACACAAACACAACACCATTTTTCAACAGATTCATGGAGACCTTGGACTACTACTTGGCGATCTTCGAGTCTATTGATGTCACACTCCCAAGAAACAGCAAGGAGAGGATCAATGTGGAGCAGCATTGTCTGGCCAGGGATATTGTCAACATTGTGGCTTGTGAAGGGAAGGAAAGGGTCGAGCGCCACGAACTCTTCGGCAAGTGGAAGTCGAGGTTGACTATGGCCGGATTCCGGCAGTGTCCTTTGAGCTCCTATGTGAATTCTGTTATAAGAAGCCTTCTCAGGTGCTATTCTGAACACTATTCCTTGGTGGAGAAGGACGGAGCCATGTTGTTGGCATGGAAGAACAGAAATTTGATATCAGCTTCAGCATGGCACTGA 1764 0.4779 MDSQQLYSFGVTSAGLPYIPSFPTIPSSQPNRLLGSLKFDTGNSPNSPFSTHFDSDTLSAFSDSQDQQHSPGEILSGVSTSCNSPFETNHYLHTSVSSADSNRGSFQLYSARSSLLQNANCNQKIRNVLLELESALMAPDEEEVTTSNASMVESSGPTTSGQRNRSWSHDHYGSQFVQSQGSYVTGSRQTSEFEHVMKRQKSIVEASSPPGFPSGNLKQLLVACAEAMADGNMNDFDQLISKAKGAVSITGEPLQRLGAYMVEGLVARKEASGTGIYRALKCREPEGKDLLSYMQMLFEICPYLKFGYMAANGAIAEACRDEDHIHIIDFQIAQGTQWMTLLQALAARPRGPPHVRITGIDDPVSRYARGEGLEVVGKRLAMMSEKFRIPVEFHGVPVYAPDVTRDMLNIRSGEALAVNFPLQLHHTADESVDVNNPRDGILRLVKSLSPKVVTLVEQESNTNTTPFFNRFMETLDYYLAIFESIDVTLPRNSKERINVEQHCLARDIVNIVACEGKERVERHELFGKWKSRLTMAGFRQCPLSSYVNSVIRSLLRCYSEHYSLVEKDGAMLLAWKNRNLISASAWH 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g02566 587 ProSiteProfiles GRAS family profile. 208 587 IPR005202 -
Arst8g02566 587 MobiDBLite consensus disorder prediction 45 79 - -
Arst8g02566 587 Pfam GRAS domain family 217 586 IPR005202 -
Arst8g02566 587 MobiDBLite consensus disorder prediction 141 169 - -
Arst8g02566 587 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 196 583 IPR005202 -
Arst8g02566 587 MobiDBLite consensus disorder prediction 140 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g02566 Arst-Chr8 35018824 35021783 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g02566 215 586 GRAS Transcription Factor Family AT1G50600 61.022 3.16e-170 492
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Arst8g02566 GRAS 1.3e-128 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g02566 - - adu:107462432 1177.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g02566 8 35018824 35021783 Arst8g02566 8 35018824 35021783 ECH
Arst8g02566 8 35018824 35021783 Arst3g02155 3 26389023 26392701 PCT