Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g02521 ATGGAAACTATACTTGGTTTTATCAAACTTAGGATTAACAGAGGCATTAATCTTGCAAAACGCGATGCTTATTCAAGCGACCCTTATGTTGTTGTCAAAATGGGTGAACAGAAGCTGAAAACTGCGTTCATACGTAAAAATATTAATCCGGTGTGGAATGAAGAATTGACTCTATACGTTAAGGATGTTGCAACTCCAATATATCTGCAAGTTTTTGACAAAGACACATTCACTAAAGACGATGAAATGGGTGATGCAGTTATAGATTTAAGGCCGTATATTGAGTGTCATTTGATCGGAATGGAGAGTATGCCAGATGGATGTGTAGTGAAGAGAATTCAACCAAATAGAACTAACTGTCTTGCTGAAGAGAGCACATGCTTTTGGCGCAATGGGAGTATAGTCCAACGTATGATGCTAAGATTGAAAAATGTTGAGTGTGGCGAAATAGAGTGTGAAATTGAGTGGCGTGATATTCCTGGCTGTAATGGTTTAGCAGAGCTAATCAAATCTTGA 516 0.3818 METILGFIKLRINRGINLAKRDAYSSDPYVVVKMGEQKLKTAFIRKNINPVWNEELTLYVKDVATPIYLQVFDKDTFTKDDEMGDAVIDLRPYIECHLIGMESMPDGCVVKRIQPNRTNCLAEESTCFWRNGSIVQRMMLRLKNVECGEIECEIEWRDIPGCNGLAELIKS 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g02521 171 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
Arst8g02521 171 Gene3D C2 domain 5 161 IPR035892 -
Arst8g02521 171 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 4 162 IPR044562 -
Arst8g02521 171 Pfam C2 domain 8 92 IPR000008 -
Arst8g02521 171 SMART C2_3c 7 102 IPR000008 -
Arst8g02521 171 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 157 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g02521 Arst-Chr8 34445204 34445939 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g02521 38 166 C2H2 Transcription Factor Family AT1G70790 61.069 3.25e-56 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g02521 - - qsa:O6P43_032566 238.424