Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g02517 ATGTCAGTGGAACATATACTTGGTGCTATCAAACTTAGGATTAAAAGAGGCATTAATCTCGCAATACGCGATACTTATTCTAGTGACCCTTATGTTGTTGTCAAAATGGAAGAACAGAAGTTGAAAACCGCGTACATACGGAAAAATATTAATCCAGTATGGAATGAAGAATTGACTCTTTATGTTAAGGATGTTGCAACTCCAATAACTATGCAAGTTTTCGACAAAGACATATTCACTGCAGACGATGAAATGGGCGATGCATTTATAGACATAAGGCCGTATATTGGGTGCCATTTGATGGGATTAAAGAGTTTGCCAGATGGATGTGTGGTGAAGAAAATTCAACCAAATAGGACTAACTGTCTTGCTGAAGAGAGCATATGCTTTTGGCGCAATGGGAGTATAGTCCAACCTATGATTTTAAGACTGAAAAATGTTGAGTGCGGCGAAATAGAATGTGAAATTGAGTGGCGTAATATTCCCGGTTGTAAAGGTTTATCAGGATTAAGATCTTGA 519 0.3776 MSVEHILGAIKLRIKRGINLAIRDTYSSDPYVVVKMEEQKLKTAYIRKNINPVWNEELTLYVKDVATPITMQVFDKDIFTADDEMGDAFIDIRPYIGCHLMGLKSLPDGCVVKKIQPNRTNCLAEESICFWRNGSIVQPMILRLKNVECGEIECEIEWRNIPGCKGLSGLRS 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g02517 172 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 6 165 IPR044562 -
Arst8g02517 172 Pfam C2 domain 9 94 IPR000008 -
Arst8g02517 172 ProSiteProfiles C2 domain profile. 1 105 IPR000008 -
Arst8g02517 172 SMART C2_3c 9 115 IPR000008 -
Arst8g02517 172 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 7 160 IPR035892 -
Arst8g02517 172 Gene3D C2 domain 7 162 IPR035892 -
Arst8g02517 172 CDD C2_ArfGAP 7 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g02517 Arst-Chr8 34417888 34418602 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g02517 40 168 C2H2 Transcription Factor Family AT1G70790 61.832 3.27e-55 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g02517 - - qsa:O6P43_032566 234.958