Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g02497 ATGGAAAGAATCAGCACCGCACCGCCTCAGCGAATTTGCAAATACGACGTTTTCATCAGTTTCAGGGGTGCAGACACCCGCAACACCTTCGTCGATCATCTCTACAATCACCTCATCCGAAAAGGTATCTTCATCTTCAAGGATGACAAGACGCTGGAGCAAGGTCAACCCATTTCATCTCAGCTGATGCAGGCAATTAGGGATTCACGGGTTTCCATTGTTGTCTTCTCAAAGGAGTACCCCACTTCCACTTGGTGTTTAGATGAAATGGCTGCTATTGTTGACTGCCAGAGAGAGTTCAATCAAGCTATCTTGCCAGTTTTCTATGATGTGGATCCTTCTCATGTGCGCAAACAGAACGGTGTGTACCACGATGCTTTTATTTCCCATTCACAGAGACAACAGCTAAATAAGGTCCGTCGCTGGAAGAGTGCTATGACGACTTTGGCAAATTCTGTTGGTTGGGATGTTAGAAATAAGCCAGAGTTCAAAGAGGTTGAAAATATTGTTCAGAAAATAGTGAAAACATTGAATCATAAATTCTCTGGGTTTGCTGATGACTTGATTGGGATGCAACCTCGTGTGGAAGAATTGGAAAAGCTTCTCAAGTTAAGATCAGAGGATGATGGCTTTCGAGTTTTAGGATTATGGGGGATGGGCGGTATAGGAAAGACAACTCATGCTACTGCCTTATATGATAGAATCTCTTATCAATTTGATGCTTCTTGTTTTGTGGAGAATGTGAGCAAACTTTACAAGGATGGTGGTGCTATGGCCATACAAAAACAAATTCTTCGCCAAGCTTTGGAGGTAAAAAGATTAGATACTAAAAGTCCTTCTGAGATATCTGGGATTATAATAAATAGGCTACACAGTATAAAGGTCCTTATTGTGTTGGACAATGTTGATCACCTAAAGCAATTGGAAGAGTTGGCTATCAATCCTAAATTACTTTGTGAAGGGAGTAGAATAATCATAACCACCAGGGATGAGCATATTTTAAAAGCGTATGGAGCGGATGAAGTTCACAATGTTCCCCTATTGAGTGATAAAGAAGCTTATGAACTGTTTAGTAGAAAAGCCTTCAAGAGAGAGGGTCCAAGCAACAATTGTGAGGAGCTGATTCCTGAAGTACTTGAATACGCTCAAAGACATCCACTGACAATTAGAGTGGTGGGTTCTTTCTTGTGTTCCCGCAATGCTACCCAATGGAAAGATGCTTTGGATAGATTAAGGAATAATCTAGAAGACGAAATTGCAAATGTGCTTCGGATAAGTTATGAGGGGCTACAATTTGAGGAGAAAGAAATATTTCTACACATTGCTTGTTTTTTCAGAGGGGAGAGGGAGGATTATGTAAAGCGAATACTAGATTCTCTTGGATTATATCCTCATATTGGAATTTCAGTTATTGCGGAAAAATCACTCATAACCATTAGAAACCAAGAAATTCATATGCACGAAATGCTGCAAGAGTTGGGAAAGAAAATTGTTCGGGAGAAATATCCTCAAGAACCTGGATCATGGAGTAGGATATGGAGTTACAAGGATTTCCATCATGTCTTGATGTCAGAAACGGGAACAAATGAGATTAAAGCCATAGTTGTTGATATAAAAGAGGATATCAGCGATTGCAATCAGATGGTTGAAGGGTTGGCCAAAATGAAGGATCTCAAGATGCTCATTGTACATCAAAAGAACAACCATTCAGAAAGTAGACTCAAATCTCTTTCTAGTTGTATGAAGCATTATCTTTCATCGCATGGTTATTCTTTCCCTTCTTTGCCATCACTGTTTCACCCTTCAGAAAGTAAACTCAAATGTCTTTCTAGTTGTCTGAAGTATCTTTCATGGCATGGTTACCCTTTTCCTTCTTTGCCATCAGTGTTTCACCCTTCAGAATGTCTCGTTGAAATGAATTTGTCTGGTAGCAGTATCAAAAGCCTATGGGAAGGCCGCAAGACATTTTTTCGCCTAACAATATTAGATTTGAGCAACTCGAAAAAGCTTATGGAAACTCCAAATTTTGAATGGTGCACAAGTCTTAAGCGACTAGATCTTTCAGGATGCACAAACCTACAACATGTTCACCCTTCAATTGGCCTTCTTGCACGACTTGTCTACTTGAATTTGCGAAATTGTAGTAGTTTGGTTACCCTCTACTTTGGCGGTGATGAATGCAAGTTAAGTTCTCTCATAGTTCTACATCTCTCAGGCTGTACAAAATTGGAAACTACGCTAGATTTTTCAAGGATCTTAAATCTAGAATATCTTGATCTTGAACAATGTACAAGTTTGGCTAAGGTGCATGAATCTCTCTGGTCCCTTGGAAAACTTAGATCTTTGAGTTTGAGAGGTTGTCTAGGGCTGAAGGAGGGACCCAACGATATCAGTTGGATGACATCTCTTCAAACTCTAGATTTTCAGGGGTGCTCAAGGCTTTTGAAACTTCAGCTTATTTTGAACAAATATGAAAGATCCAAACTTCACCAAACTCTTGGCAAGTCCATCATTTCTCCTCGAATTTCGAAAGCTTTGACATTTCTAGATCTTGGCTTTTGCAATCTAGGGAAAGTCCCTGATACTATCGGGGAATTAAAGGGGTTAGAAAGACTGAATTTACAGGGTAACAAATTCAATAGTTTACCCAGTACCATTGAGAGTCTTTCCAGCCTAGCATATTTGAACTTGGAGCATTGCTTTAATCTTTCTTCATTGCCTACACTCCCATTTGTCAATAACTCATCAGGAGGACGATATTTTAAAACAATATCTGGATCAAGGAATCACGGTTCAGGACTATATATGCTTTACTGTCCCATAGTTGATATACAGCGTTGTCTAAATTGGGCATTTGTCTGGCTAACAAGATTAATTAAGCAACCTTGTCATTTCAGGTGTGGCTTTGACATTGTTATTCCTGGGAGTAGTATTCCATGGTGGTTCAATCGTTTATTTGTGGGTGGATCAACAATAAGGATAGTGGACTCTAATAATATGGATGACAATTGGATAGGCTTTACCTTTTGTGTAGCATTTTGTGTAACCGATCCTTCAGCGATTACTGGTTCTTCTCATAACCGGTTGTCCACGTCATTGCCGAGTCCATTTTATCTTTCTTTTGAAAGTGAACAGGCAGAAGAAACCTTCTGTATGCCATGCCGTTTAGACTTTAAAGGTGGGTCCCAACCTCCTAAGACCCAAAACTTAGAACATGTCTGGATTATCTATATTTCTCGGCCACACTGCCATTTTGTGAAAACAGGAGCCAATATCACATTTAAAGCCTGCCCAGGCATTGAGATGAGGAAATGGGGACTGCGCATGGTATTCAAGCAAGATATAGAAATAATTCAAAGAAACTCACAATATCAACTGGAAATCTCCATGTTTGTGTGTCCGTCTGAAATCCTACTTCAAGATCATGGGTTGGTTATTGAAGAAGTGCCTGAAAGCAACAACAGTAGCATTGGGCCTAAAGTCCAGCTTCCTTACAATTGGTATGTAACTGATGAGGAGGAAAAGGAGAATCTAGAAGCCAAAAGCAAAGAAATTAATCTCGCAAATATTGGCCTTTAA 3579 0.3973 MERISTAPPQRICKYDVFISFRGADTRNTFVDHLYNHLIRKGIFIFKDDKTLEQGQPISSQLMQAIRDSRVSIVVFSKEYPTSTWCLDEMAAIVDCQREFNQAILPVFYDVDPSHVRKQNGVYHDAFISHSQRQQLNKVRRWKSAMTTLANSVGWDVRNKPEFKEVENIVQKIVKTLNHKFSGFADDLIGMQPRVEELEKLLKLRSEDDGFRVLGLWGMGGIGKTTHATALYDRISYQFDASCFVENVSKLYKDGGAMAIQKQILRQALEVKRLDTKSPSEISGIIINRLHSIKVLIVLDNVDHLKQLEELAINPKLLCEGSRIIITTRDEHILKAYGADEVHNVPLLSDKEAYELFSRKAFKREGPSNNCEELIPEVLEYAQRHPLTIRVVGSFLCSRNATQWKDALDRLRNNLEDEIANVLRISYEGLQFEEKEIFLHIACFFRGEREDYVKRILDSLGLYPHIGISVIAEKSLITIRNQEIHMHEMLQELGKKIVREKYPQEPGSWSRIWSYKDFHHVLMSETGTNEIKAIVVDIKEDISDCNQMVEGLAKMKDLKMLIVHQKNNHSESRLKSLSSCMKHYLSSHGYSFPSLPSLFHPSESKLKCLSSCLKYLSWHGYPFPSLPSVFHPSECLVEMNLSGSSIKSLWEGRKTFFRLTILDLSNSKKLMETPNFEWCTSLKRLDLSGCTNLQHVHPSIGLLARLVYLNLRNCSSLVTLYFGGDECKLSSLIVLHLSGCTKLETTLDFSRILNLEYLDLEQCTSLAKVHESLWSLGKLRSLSLRGCLGLKEGPNDISWMTSLQTLDFQGCSRLLKLQLILNKYERSKLHQTLGKSIISPRISKALTFLDLGFCNLGKVPDTIGELKGLERLNLQGNKFNSLPSTIESLSSLAYLNLEHCFNLSSLPTLPFVNNSSGGRYFKTISGSRNHGSGLYMLYCPIVDIQRCLNWAFVWLTRLIKQPCHFRCGFDIVIPGSSIPWWFNRLFVGGSTIRIVDSNNMDDNWIGFTFCVAFCVTDPSAITGSSHNRLSTSLPSPFYLSFESEQAEETFCMPCRLDFKGGSQPPKTQNLEHVWIIYISRPHCHFVKTGANITFKACPGIEMRKWGLRMVFKQDIEIIQRNSQYQLEISMFVCPSEILLQDHGLVIEEVPESNNSSIGPKVQLPYNWYVTDEEEKENLEAKSKEINLANIGL 1192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g02497 1192 Pfam TIR domain 14 180 IPR000157 GO:0007165
Arst8g02497 1192 Gene3D - 12 179 IPR035897 -
Arst8g02497 1192 Coils Coil 401 425 - -
Arst8g02497 1192 Gene3D Ribonuclease Inhibitor 543 725 IPR032675 -
Arst8g02497 1192 PRINTS Disease resistance protein signature 382 396 - -
Arst8g02497 1192 PRINTS Disease resistance protein signature 289 303 - -
Arst8g02497 1192 PRINTS Disease resistance protein signature 677 693 - -
Arst8g02497 1192 PRINTS Disease resistance protein signature 213 228 - -
Arst8g02497 1192 ProSiteProfiles TIR domain profile. 13 177 IPR000157 GO:0007165
Arst8g02497 1192 SUPERFAMILY "Winged helix" DNA-binding domain 417 522 IPR036390 -
Arst8g02497 1192 Pfam Leucine rich repeat 846 900 IPR001611 GO:0005515
Arst8g02497 1192 Gene3D Ribonuclease Inhibitor 726 836 IPR032675 -
Arst8g02497 1192 Gene3D Ribonuclease Inhibitor 837 945 IPR032675 -
Arst8g02497 1192 FunFam Disease resistance protein (TIR-NBS-LRR class) 11 179 - -
Arst8g02497 1192 Gene3D - 347 431 IPR042197 -
Arst8g02497 1192 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 15 717 IPR044974 GO:0006952
Arst8g02497 1192 SMART till_3 14 152 IPR000157 GO:0007165
Arst8g02497 1192 Pfam NB-ARC domain 199 417 IPR002182 GO:0043531
Arst8g02497 1192 SUPERFAMILY Toll/Interleukin receptor TIR domain 13 155 IPR035897 -
Arst8g02497 1192 Gene3D - 180 343 IPR027417 -
Arst8g02497 1192 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 183 441 IPR027417 -
Arst8g02497 1192 SUPERFAMILY L domain-like 607 955 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g02497 Arst-Chr8 34266119 34275588 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g02497 15 881 WRKY Transcription Factor Family AT4G12020 28.164 5.75e-81 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g02497 - - adu:107462392 2373.97