Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g02494 ATGAGTTTTAGTCCGGTGATTGTTCCTCGCTTAACTGGACCAAATTCCACTCATCCCCCATCAATGATCATCATAGTCTGTAGAATAGCAGAGAAAATGAGCTCAAAATATTCAGGTGACATATCATCAGATTTGGGTAATTGGTTACCTTTAGTTAGCTCTTTCATAGCAGGTATGATTTTGAGTCTATTAATATCAGACAGGTTATCCACTTGGAAATCCTCACTGGAAAGCAAGATTTGGACTCTGGCGGGTCAGTTGGGACATCGAGATGGAGCTTCTGCTCCTCCCCTGGAATCCGACAACGTCCATGGTGACCAGCAAGTTATAACTTCCACCCTGAGCGACGACGAAGATTCATCTTCCTATCATTCTGTGGATTCAAACATCAGCGAAGTCAGTTCTTTATGCGAGGAAGATACTCCTCCCGTTCATTCTCTGGATTCAAACAACAGCGAAGAATGCGTGGATTCCCATAAACAGGTCTATAGATACGATGTGTTCCTAAGCTTCCGTGGTCCCGACGTCCGCAACACTTTCGTTGATCATCTTTTCGAACGTCTCGAAAGAAGAGGCATTTTCACGTTCAAGGATAATGTAAGGCTCAAGAAAGGAAAACGCATTAAAGCCGAGCTAATGGATGCAATTAGAGATTCAAGGCTTGCTATTGTAGTCTTCTCTAGCACATACCCGACCTCCACATGGTGTCTCGATGAAATGTCCACGATAGCTGATCTCCACCGACAAAATAAACAAATTGTTGTCCCAGTTTTCTATGACGTTCCTTCTTCTGATGTTGGAAGTCAAACGGGCCCGTACGAAGTCCACTTCAATTCAGAGCGATTCAGGAAATTTTCCAATAGGGTTGCCCGATGGAAGGTTGATATGAAGTATTTGGCTAAAGTATGCGGGTTCTCTATTGTAGACTCGAACAGACCTGAGACTACACACCTGGAAGAGATTACTAGTTTTGTGGCAAAGGAATTGAATCATAGATTCACATTACTTGCCAGTGATCTAATTGGGATACAGCCCCGAGTAGCAGAGCTCGAAAGACGACTCAACTTGACATCAGGGAATGTTGCTTTTCAAATTCTTGAAATTTGGGGCATGAGCGGCATAGGAAAGACAGTTCTTGCCATGATCTTGTACGATAGAATATCTCATCAATTTGATGCTTGTTGTTTTATTCAGGGCGTAAACGGTATTTATACAAGGCATGCCAATGCCTGCGAGACTGCTACTACAAACGTTCAAAAACAAATTCTTCGTCAACTGTTTCAGGAACAAGTTGAGTCTGATGATCCTGCCGAAATAGCCAAGATGCTACAAAATAGACTGTGTAACCGAAATCTTCCTAAAAGGGTTCTTATAGTTCTTGACGATGTTGGTGATCCAAAACAATGGGATGATTTGGGTATAGTTCCTGACTCACTTGGGTTAGGAAGCAGAGTTGTCATAACTACTAGATTTCAGCATATTCTCAATGTGAATACAGCGTATGAAATTCACGAGGTTCAACTATTGAATGATGATGAAGCTCTTGAACTTTTTCAAAGAAAAGCCTTCAAAATTGATTGTCATAGCCTGGCTATCAGTGATGTATCTCGTAGGATAATAGAATATGCTCAATGTCTTCCTTCAGCAATTATAAAACTGGGTTACTACTTCAATCAAAAAGCTGAAGCACATTGGGAAAGATGCTTCCAGAGATGGAGAGAATATCCAGAAGAAAAATATATGAACTCTCTGCAGGAAAAAGATTACGAAGTTCTGAATGAAGATGAGAAGATGATCTTTCTAGATATAGCTTGTTTCTTTAAGGGAAAAAACAAGAAGTATGTGGAGCACATTCTAGGGAGTAGAATATCGGATCCCCACCTTGCAATTCAAGAGATCCGGAAGAAATCTCTCATAAAAATTAGGAATCACGAAATTCATATGCATCAAATATTACAAGATTTGGGCAAAAAAATTGTTCGGGGCAATAATAAAGACGAGCCAAAATGCTGGTCTAGATTGTGGAATGCAGAGGATTTCCAAGAAGTCTTGATAGATATGGAAGGAAACAAAGTTCAGGCCATAGTTTTGGATGAAGATGTCTCCAAATACATGAAAATTGGCGGATTGTCAGAACTGAGGGATCTTAGACTGTTGATATTACATCATCATAAGAGCTCCTCAGAAAAGCTCACTTTTCGTTTCAATAACATCGGACGACTATGGGAAGGCAGCCAGGCAATTCCAAATCTAAAAAGGATGAATCTGAGGAACTCGAGAGATCTTGTAATCACTCCAAATTTTGCATGCTGCCAAGGACTTGTGCGGCTGGATCTTACAGGATGCATAAACCTAACTGAAGTCCATGATTCAATCGGACTTCTCAGAGAGCTTAATTACTTGAGTTTGCGAGAATGTAGCAGTCTATCCCTTCTTGATTTCGGCCCTAATTGCCAGTTAAGTTCCCTAAGAACTCTACTGCTCTCTGGCTGCACCAACCTCCAACAAACACCAGATTTCACAGAACTTTCAAATCTTAGGTACCTTGATCTTGAGCGATGCACAAGTTTGTCCACAATGCATGAGTCTATTGGTACTCTTGCAACGCTTAAGTACTTGAGTCTGAGAGGCTGCAAAAATCTTGTTCATGCACCTTACATTCTCAATGGCAACTCATCCCTCCTAATTCTTGATTTGAGCGGTTGCATGATGATAACCAACCTTCCCCGCTGCAGACGAAAATTTGCGCCTTCCTCCTGCCTGGAATCTTTGATGTTTTTGAGTCCTGTCTTCCTTGAGCCACAAAGAATTCTTGATTTTGTTGGAGAGTTGATGTTTTTCGATGGGGAGTGGATTTGTTCTAAGCTAGCATATTTAAACTTGGCGCACTGTCATGAGCTTAGAAGATTTCCCGAGGCTTCATTTCATGGTCTTCATGAGATGAAAGGCACTTTAGAACGGTATCCACAACTTTCAGTCATTGGTCAAGATTATATATTTTCAGCTTCTACTGTGTGA 3018 0.4109 MSFSPVIVPRLTGPNSTHPPSMIIIVCRIAEKMSSKYSGDISSDLGNWLPLVSSFIAGMILSLLISDRLSTWKSSLESKIWTLAGQLGHRDGASAPPLESDNVHGDQQVITSTLSDDEDSSSYHSVDSNISEVSSLCEEDTPPVHSLDSNNSEECVDSHKQVYRYDVFLSFRGPDVRNTFVDHLFERLERRGIFTFKDNVRLKKGKRIKAELMDAIRDSRLAIVVFSSTYPTSTWCLDEMSTIADLHRQNKQIVVPVFYDVPSSDVGSQTGPYEVHFNSERFRKFSNRVARWKVDMKYLAKVCGFSIVDSNRPETTHLEEITSFVAKELNHRFTLLASDLIGIQPRVAELERRLNLTSGNVAFQILEIWGMSGIGKTVLAMILYDRISHQFDACCFIQGVNGIYTRHANACETATTNVQKQILRQLFQEQVESDDPAEIAKMLQNRLCNRNLPKRVLIVLDDVGDPKQWDDLGIVPDSLGLGSRVVITTRFQHILNVNTAYEIHEVQLLNDDEALELFQRKAFKIDCHSLAISDVSRRIIEYAQCLPSAIIKLGYYFNQKAEAHWERCFQRWREYPEEKYMNSLQEKDYEVLNEDEKMIFLDIACFFKGKNKKYVEHILGSRISDPHLAIQEIRKKSLIKIRNHEIHMHQILQDLGKKIVRGNNKDEPKCWSRLWNAEDFQEVLIDMEGNKVQAIVLDEDVSKYMKIGGLSELRDLRLLILHHHKSSSEKLTFRFNNIGRLWEGSQAIPNLKRMNLRNSRDLVITPNFACCQGLVRLDLTGCINLTEVHDSIGLLRELNYLSLRECSSLSLLDFGPNCQLSSLRTLLLSGCTNLQQTPDFTELSNLRYLDLERCTSLSTMHESIGTLATLKYLSLRGCKNLVHAPYILNGNSSLLILDLSGCMMITNLPRCRRKFAPSSCLESLMFLSPVFLEPQRILDFVGELMFFDGEWICSKLAYLNLAHCHELRRFPEASFHGLHEMKGTLERYPQLSVIGQDYIFSASTV 1005
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g02494 1005 SMART till_3 164 302 IPR000157 GO:0007165
Arst8g02494 1005 Gene3D Ribonuclease Inhibitor 818 992 IPR032675 -
Arst8g02494 1005 ProSiteProfiles TIR domain profile. 163 329 IPR000157 GO:0007165
Arst8g02494 1005 Gene3D - 162 330 IPR035897 -
Arst8g02494 1005 Gene3D Ribonuclease Inhibitor 683 813 IPR032675 -
Arst8g02494 1005 SUPERFAMILY L domain-like 648 978 - -
Arst8g02494 1005 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 822 973 IPR044974 GO:0006952
Arst8g02494 1005 Pfam NB-ARC domain 358 578 IPR002182 GO:0043531
Arst8g02494 1005 Gene3D - 331 504 IPR027417 -
Arst8g02494 1005 Gene3D - 509 598 IPR042197 -
Arst8g02494 1005 FunFam Disease resistance protein (TIR-NBS-LRR class) 161 331 - -
Arst8g02494 1005 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 328 603 IPR027417 -
Arst8g02494 1005 SUPERFAMILY Toll/Interleukin receptor TIR domain 163 304 IPR035897 -
Arst8g02494 1005 PRINTS Disease resistance protein signature 450 464 - -
Arst8g02494 1005 PRINTS Disease resistance protein signature 365 380 - -
Arst8g02494 1005 PRINTS Disease resistance protein signature 841 857 - -
Arst8g02494 1005 Pfam TIR domain 165 331 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g02494 Arst-Chr8 34259066 34264357 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g02494 165 948 WRKY Transcription Factor Family AT4G12020 25.711 2.17e-53 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g02494 - - aip:107614139 1288.86