Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g02493 ATGAGTTTTAGTCCGGTGATTGTTCCTCGCTTAACTGGACCAAATTCCACTCATCCCCCATCAATGATCATCATAGTCTGTAGAATAGCAGAGAAAATGAGCTCAAAATATTCAGGTGACATATCATCAGATTTGGGTAATTGGTTACCTTTAGTTAGCTCTTTCATAGCAGGTATGATTTTGAGTCTATTAATATCAGACAGGTTATCCACTTGGAAATCCTCACTGGAAAGCAAGATTTGGACTCTGGCGGGTCAGTTGGGACATCGAGATGGAGCTTCTGCTCCTCCCCTGGAATCCGACAACGTCCATGGTGACCAGCAAGTTATAACTTCCACCCTGAGCGACGACGAAGATTCATCTTCCTATCATTCTGTGGATTCAAACATCAGCGAAGTCAGTTCTTTATGCGAGGAAGATACTCCTCCCGTTCATTCTCTGGATTCAAACAACAGCGAAGAATGCGTGGATTCCCATAAACAGGTCTATAGATACGATGTGTTCCTAAGCTTCCGTGGTCCCGACGTCCGCAACACTTTCGTTGATCATCTTTTCGAACGTCTCGAAAGAAGAGGCATTTTCACGTTCAAGGATAATGTAAGGCTCAAGAAAGGAAAACGCATTAAAGCCGAGCTAATGGATGCAATTAGAGATTCAAGGCTTGCTATTGTAGTCTTCTCTAGCACATACCCGACCTCCACATGGTGTCTCGATGAAATGTCCACGATAGCTGATCTCCACCGACAAAATAAACAAATTGTTGTCCCAGTTTTCTATGACGTTCCTTCTTCTGATGTTGGAAGTCAAACGGGCCCGTACGAAGTCCACTTCAATTCAGAGCGATTCAGGAAATTTTCCAATAGGGTTGCCCGATGGAAGGTTGATATGAAGTATTTGGCTAAAGTATGCGGGTTCTCTATTGTAGACTCGAACAGACCTGAGACTACACACCTGGAAGAGATTACTAGTTTTGTGGCAAAGGAATTGAATCATAGATTCACATTACTTGCCAGTGATCTAATTGGGATACAGCCCCGAGTAGCAGAGCTCGAAAGACGACTCAACTTGACATCAGGGAATGTTGCTTTTCAAATTCTTGAAATTTGGGGCATGAGCGGCATAGGAAAGACAGTTCTTGCCATGATCTTGTACGATAGAATATCTCATCAATTTGATGCTTGTTGTTTTATTCAGGGCGTAAACGGTATTTATACAAGGCATGCCAATGCCTGCGAGACTGCTACTACAAACGTTCAAAAACAAATTCTTCGTCAACTGTTTCAGGAACAAGTTGAGTCTGATGATCCTGCCGAAATAGCCAAGATGCTACAAAATAGACTGTGTAACCGAAATCTTCCTAAAAGGGTTCTTATAGTTCTTGACGATGTTGGTGATCCAAAACAATGGGATGATTTGGGTATAGTTCCTGACTCACTTGGGTTAGGAAGCAGAGTTGTCATAACTACTAGATTTCAGCATATTCTCAATGTGAATACAGCGTATGAAATTCACGAGGTTCAACTATTGAATGATGATGAAGCTCTTGAACTTTTTCAAAGAAAAGCCTTCAAAATTGATTGTCATAGCCTGGCTATCAGTGATGTATCTCGTAGGATAATAGAATATGCTCAATGTCTTCCTTCAGCAATTATAAAACTGGGTTACTACTTCAATCAAAAAGCTGAAGCACATTGGGAAAGATGCTTCCAGAGATGGAGAGAATATCCAGAAGAAAAATATATGAACTCTCTGCAGGAAAAAGATTACGAAGTTCTGAATGAAGATGAGAAGATGATCTTTCTAGATATAGCTTGTTTCTTTAAGGGAAAAAACAAGAAGTATGTGGAGCACATTCTAGGGAGTAGAATATCGGATCCCCACCTTGCAATTCAAGAGATCCGGAAGAAATCTCTCATAAAAATTAGGAATCACGAAATTCATATGCATCAAATATTACAAGATTTGGGCAAAAAAATTGTTCGGGGCAATAATAAAGACGAGCCAAAATGCTGGTCTAGATTGTGGAATGCAGAGGATTTCCAAGAAGTCTTGATAGATATGGAAGGAAACAAAGTTCAGGCCATAGTTTTGGATGAAGATGTCTCCAAATACATGAAAATTGGCGGATTGTCAGAACTGAGGGATCTTAGACTGTTGATATTACATCATCATAAGAGCTCCTCAGAAAAGCTCACTTTTCGTTTCAATAAGTTATGCTATCTTTCATGGCATGGTTTCTCTTACACTTCTTTGTCACTATGCATATGGTCTAATCTTGCTGAATTGAATTTACCTAATAGCAGCATCGGACGACTATGGGAAGGCAGCCAGGCAATTCCAAATCTAAAAAGGATGAATCTGAGGAACTCGAGAGATCTTGTAATCACTCCAAATTTTGCATGCTGCCAAGGACTTGTGCGGCTGGATCTTACAGGATGCATAAACCTAACTGAAGTCCATGATTCAATCGGACTTCTCAGAGAGCTTAATTACTTGAGTTTGCGAGAATGTAGCAGTCTATCCCTTCTTGATTTCGGCCCTAATTGCCAGTTAAGTTCCCTAAGAACTCTACTGCTCTCTGGCTGCACCAACCTCCAACAAACACCAGATTTCACAGAACTTTCAAATCTTAGGTACCTTGATCTTGAGCGATGCACAAGTTTGTCCACAATGCATGAGTCTATTGGTACTCTTGCAACGCTTAAGTACTTGAGTCTGAGAGGCTGCAAAAATCTTGTTCATGCACCTTACATTCTCAATGGCAACTCATCCCTCCTAATTCTTGATTTGAGCGGTTGCATGATGATAACCAACCTTCCCCGCTGCAGACGAAAATTTGCGCCTTCCTCCTGCCTGGAATCTTTGATGTTTTTGAGTCCTGTCTTCCTTGAGCCACAAAGAATTCTTGATTTTGTTGGAGAGTTGATGTTTTTCGATGGGGAGTGGATTTGTTCTAAGCTAGCATATTTAAACTTGGCGCACTGTCATGAGCTTAGAAGATTTCCCGAGGCTTCATTTCATGGTCTTCATGAGATGAAAGGCACTTTAGAACGGTATCCACAACTTTCAGTCATTGGTCAAGATTATATATTTTCAGCTTCTACTGTGTGA 3111 0.4092 MSFSPVIVPRLTGPNSTHPPSMIIIVCRIAEKMSSKYSGDISSDLGNWLPLVSSFIAGMILSLLISDRLSTWKSSLESKIWTLAGQLGHRDGASAPPLESDNVHGDQQVITSTLSDDEDSSSYHSVDSNISEVSSLCEEDTPPVHSLDSNNSEECVDSHKQVYRYDVFLSFRGPDVRNTFVDHLFERLERRGIFTFKDNVRLKKGKRIKAELMDAIRDSRLAIVVFSSTYPTSTWCLDEMSTIADLHRQNKQIVVPVFYDVPSSDVGSQTGPYEVHFNSERFRKFSNRVARWKVDMKYLAKVCGFSIVDSNRPETTHLEEITSFVAKELNHRFTLLASDLIGIQPRVAELERRLNLTSGNVAFQILEIWGMSGIGKTVLAMILYDRISHQFDACCFIQGVNGIYTRHANACETATTNVQKQILRQLFQEQVESDDPAEIAKMLQNRLCNRNLPKRVLIVLDDVGDPKQWDDLGIVPDSLGLGSRVVITTRFQHILNVNTAYEIHEVQLLNDDEALELFQRKAFKIDCHSLAISDVSRRIIEYAQCLPSAIIKLGYYFNQKAEAHWERCFQRWREYPEEKYMNSLQEKDYEVLNEDEKMIFLDIACFFKGKNKKYVEHILGSRISDPHLAIQEIRKKSLIKIRNHEIHMHQILQDLGKKIVRGNNKDEPKCWSRLWNAEDFQEVLIDMEGNKVQAIVLDEDVSKYMKIGGLSELRDLRLLILHHHKSSSEKLTFRFNKLCYLSWHGFSYTSLSLCIWSNLAELNLPNSSIGRLWEGSQAIPNLKRMNLRNSRDLVITPNFACCQGLVRLDLTGCINLTEVHDSIGLLRELNYLSLRECSSLSLLDFGPNCQLSSLRTLLLSGCTNLQQTPDFTELSNLRYLDLERCTSLSTMHESIGTLATLKYLSLRGCKNLVHAPYILNGNSSLLILDLSGCMMITNLPRCRRKFAPSSCLESLMFLSPVFLEPQRILDFVGELMFFDGEWICSKLAYLNLAHCHELRRFPEASFHGLHEMKGTLERYPQLSVIGQDYIFSASTV 1036
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g02493 1036 SMART till_3 164 302 IPR000157 GO:0007165
Arst8g02493 1036 ProSiteProfiles TIR domain profile. 163 329 IPR000157 GO:0007165
Arst8g02493 1036 Gene3D Ribonuclease Inhibitor 684 1025 IPR032675 -
Arst8g02493 1036 Gene3D - 509 598 IPR042197 -
Arst8g02493 1036 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 853 1004 IPR044974 GO:0006952
Arst8g02493 1036 Gene3D - 331 504 IPR027417 -
Arst8g02493 1036 PRINTS Disease resistance protein signature 450 464 - -
Arst8g02493 1036 PRINTS Disease resistance protein signature 365 380 - -
Arst8g02493 1036 PRINTS Disease resistance protein signature 872 888 - -
Arst8g02493 1036 SUPERFAMILY "Winged helix" DNA-binding domain 589 684 IPR036390 -
Arst8g02493 1036 Pfam TIR domain 165 331 IPR000157 GO:0007165
Arst8g02493 1036 SUPERFAMILY Toll/Interleukin receptor TIR domain 163 304 IPR035897 -
Arst8g02493 1036 Pfam NB-ARC domain 358 578 IPR002182 GO:0043531
Arst8g02493 1036 FunFam Disease resistance protein (TIR-NBS-LRR class) 161 331 - -
Arst8g02493 1036 SUPERFAMILY L domain-like 703 1007 - -
Arst8g02493 1036 Gene3D - 159 330 IPR035897 -
Arst8g02493 1036 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 328 603 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g02493 Arst-Chr8 34259066 34264357 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g02493 165 979 WRKY Transcription Factor Family AT4G12020 27.251 3.50e-62 230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g02493 - - aip:107614139 1323.53