Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g02488 ATGGACTCAGGTGATGAGACGGCAAGAACTTCTGCTTATGCGAGTTGGTCATGGACCCGGTTGTGCTTTTTCATATCAGGTATCTTTTTTGGTTCATTCGTATCAGGCATGTTACTCCGTTGGAAAAAACCCTTGCTGAGCAGCAACTTCCGGGCTCTACTGGGTTACCAAGATTCGGATTCCGACAACATCCAAGATGAGGCGTCGGGCGAGGAAGATTCAGCTTCTCTTCATTCTCTGGATTCAAATATCATCCAAGGCAGCTCCCTGCGCCAGCAGGAAGATTCAGCTTGGGATCATCCTCCACCGGAGTCAAAGTCAATTATCACCGAGGGGAGTTATAAATATGATGTGTTTCTGAGTTTCATAGGTGAGGATACTCGCAGAAGTTTTATTGATTATCTTTACCATCGTCTCTCGGAAGAAGGTATTTCGGCCTTCGGAAACGAGGTGGAATTAAACAGAGGAGAAACCATTTCATCACAGTTCCTGCAAGCAATTAAAGATTCACGGATTTATATCGTTGTCTTCTCAAGAAGTTATGCTAGCTCAACTTGGTGTTTGGACGAACTGGTTGCTATAGTTGATTGTTATAAAGAAATGAAGCAAGAACTTTTCCCAGTTTTCTATGATGTGGATCCGTATGAGGTTCGATGTCAAAGTGGGGGATACGAGGATGCGTTTGATTTACATAGGGAGAGATTCAAAGAAGAGCCTGACAAGATCTACAAATGGAAGGGTGCTATGACGTATTTGGCCAATTTAAATGGTTTGACTTTAGATCAGGAAAAGGGCGAAGGGATTGAAAGAATTGTAGAGAAGGTGTCGGGCATACTGGTTTATAAATTCCAAAAGATAAGGTTTAGTGATAAACATCCAGAATCCACTGAAAGAAGACCATCATTGAAGGAAGTCAACAAATATGACGTGTTTCTAAGTCTCAGACACACTCACTCCACATTTATTTACTATCTTTACCATTATCTCACCAAGAAAGGATTTTCCACCTTCAAGAGTGATGAGGAGATTCAGAAAGGAGAATCCATTCCGTCTCAGGTCCTCCAAGCAATTAAAGATTCGCGAATTATTATAGTTGTGTTCACAAGAGATTATGCTGATTCAACAAGTTCTTTGGAGGAAATGACTACCATAGTTGAGTGTTGCCGGGAACTAGAACAAACTATCATCCCAGTTTTCTTTGATGTGGATCCCTGGGATGTTCGACTAACACAAATTGGCCCTTACAAGAAAGCCTTTGTTTCGCATACGGAGAAATTCAAACAAGATCCTCTCAAGATTCAAAAGTGGAAGGAAGCTTTAACACATGTGAGCAATATAAATGGTGTGCATATAAAACATGAGCCAGAGATTGAAGTGATTGGAAAGATCGTTCAGGCAGTGGAACTACGACTGAGGCTTACTAGTCATAATCTAGAGAAGCTTTTGAATTTAGAGGACAACCGTGTTTTAGTTCTTGGAATTTGGGGCATGGGTGGATCTGGAAAGACAACTCGTGCTTTAGCTTTGTATAAAAGAATCTTTCAGCAATTTGAGGCTGCTTGTTTTATTAAGGACTTAAGCCAGGTTTACGGAATTGGTGGTGCTACTGCTGTGGAGAAAGAAATCCTCCGTGAAACATTAAATGAAGAACTTCCAGATGTGTACAGTCCTTTCGAAATATCTGGCTTGGTAAGGAAAAGGCTATCTTGGAAACGGATACTTATAGTCTTTGACAATGTTGATGAACTAATGCAATTGAAGGAATTGGCTATAAATCGTCTAATGCTTGGGATGGGAAGTAGGATTATCATAACCACTAGGAATAGGCGAATTTTGGATGCATACGAAGTAGATGAAATTTACGAGATTCCATTATTGAATGAGGATGAAGCTCGTGAACTGTTCCTGAGTGCTTGTCCTGGTGTTACCAATTATGATTACTATACTGAGTTGATTGCAAGAGTACTAGAATATGCTGGTGGTCTTCCGTTGGCAATCAAAGAACTGGCTTCTATTTTGCAAGTCCGTTGTGAATTCTTCTTGCAAGACTTAAATAAATCCTTCTGGCAACATACCTTGAATAGATTGAGAACAAGGCCAATTGTTGAAATTATGAAGCCTCTTAAAACAAGTTTTGAGAGTTTAGACGAAGATGAGAAAGAAATCTTTTTGCACATTGCTTGTTTCTTTCATGGGAAGAGGGGGGATTATGTAATCCAAGTTCTAAATTCTTGTGGATTTTTTGCTGAAATTGGGATTCAAGCTTTGTTGGACAAATCACTCATCACCATACAAAATCAGGAAATTCATATGCACGACATGTTGCAAGATTTGGGAAAGAAAATTGTCCGTGAAGAATGTGCAGAAAATCCACCACTGCGTAGTAGATTGTGGCTTTACGAGGACTTCAACATTGCCTTGAGGTCAAAAATGGAGCGAAACAAAGTTAAAGCCATAGTTCTATATGAGGGTACCTCTACCTCCAAACATGAATATTTGAACATTGAAAGATTGTCGAAAATGAGAAATCTTGTGCTGCTCATATTATATGGTCAGCACTTTTCGGGAATTCCAACTTCTCTTCCCCACAGATTACGGTATCTTTTGTGGGACGGATATCCATTCTCTTCTTTGCCTTCATTTGAACCGTATAACCGTCTTGTTGAATTGAATTTGCCCAACAGCCGCATCAAACGGTTATGGAATGGCCGCAAGAACTTTCCACGTTTGGAAAGGGTGGATATGAGTTACTCAGAAGAGCTCACGGAGACGCCAAATTTTGAAGGGTGCCCAAGTCTTAAGCGGCTAGATCTCACAGGATGCACAAACCTAGTGCAAGTCCATCCATCTATCGGACATCTTAAAGAACTTGCTTACTTGAGTTTCCGTGACTGTGATAAGTTGGTCACCCTCAATCTTGATCATAAATGCAAATTAAGTTCTTTGAAGGTTCTTGACCTCTATAGTTGCAAAAATCTTAAGAACACAGATTTTACAGGATTACCCAATCTAGAGCACATTGATCTTGGAGAATGTACAAGTTTATCCACTGTTGATGATTTATTGGGACTCTGGCAGGAGCTATATCCTCTTCAAATGGCTCAGAAGGTTGTGTTAAAGGTTTTGACTATGACTGATGATAAAACAGTGCAGAAAGCTATCAAAGCAGTTGCAGATATATTTGGAGTTGAGGCAATAGCAGTAGATAGAAAGGAGCAGAAGCTAATAGTGATTGGAAAAATGCCCACATTGGCAATTGTGAAGAAGCTCAAAAAATTTGGCAAGGTTGATATCATATCTGTTGGACCTGTAAAAGAAGTGAAGAAGGAGGAGAAGAAGGAAGAAAAGAAAGAGGAGAAGAAGAAAAAGGAAGAGGCGGAGGAGGAAAAAAATTGCCGCTATATACACAAATTTCAATCTTCCGCCAGGTTATTGTGGTGA 3441 0.401 MDSGDETARTSAYASWSWTRLCFFISGIFFGSFVSGMLLRWKKPLLSSNFRALLGYQDSDSDNIQDEASGEEDSASLHSLDSNIIQGSSLRQQEDSAWDHPPPESKSIITEGSYKYDVFLSFIGEDTRRSFIDYLYHRLSEEGISAFGNEVELNRGETISSQFLQAIKDSRIYIVVFSRSYASSTWCLDELVAIVDCYKEMKQELFPVFYDVDPYEVRCQSGGYEDAFDLHRERFKEEPDKIYKWKGAMTYLANLNGLTLDQEKGEGIERIVEKVSGILVYKFQKIRFSDKHPESTERRPSLKEVNKYDVFLSLRHTHSTFIYYLYHYLTKKGFSTFKSDEEIQKGESIPSQVLQAIKDSRIIIVVFTRDYADSTSSLEEMTTIVECCRELEQTIIPVFFDVDPWDVRLTQIGPYKKAFVSHTEKFKQDPLKIQKWKEALTHVSNINGVHIKHEPEIEVIGKIVQAVELRLRLTSHNLEKLLNLEDNRVLVLGIWGMGGSGKTTRALALYKRIFQQFEAACFIKDLSQVYGIGGATAVEKEILRETLNEELPDVYSPFEISGLVRKRLSWKRILIVFDNVDELMQLKELAINRLMLGMGSRIIITTRNRRILDAYEVDEIYEIPLLNEDEARELFLSACPGVTNYDYYTELIARVLEYAGGLPLAIKELASILQVRCEFFLQDLNKSFWQHTLNRLRTRPIVEIMKPLKTSFESLDEDEKEIFLHIACFFHGKRGDYVIQVLNSCGFFAEIGIQALLDKSLITIQNQEIHMHDMLQDLGKKIVREECAENPPLRSRLWLYEDFNIALRSKMERNKVKAIVLYEGTSTSKHEYLNIERLSKMRNLVLLILYGQHFSGIPTSLPHRLRYLLWDGYPFSSLPSFEPYNRLVELNLPNSRIKRLWNGRKNFPRLERVDMSYSEELTETPNFEGCPSLKRLDLTGCTNLVQVHPSIGHLKELAYLSFRDCDKLVTLNLDHKCKLSSLKVLDLYSCKNLKNTDFTGLPNLEHIDLGECTSLSTVDDLLGLWQELYPLQMAQKVVLKVLTMTDDKTVQKAIKAVADIFGVEAIAVDRKEQKLIVIGKMPTLAIVKKLKKFGKVDIISVGPVKEVKKEEKKEEKKEEKKKKEEAEEEKNCRYIHKFQSSARLLW 1146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g02488 1146 ProSiteProfiles TIR domain profile. 114 279 IPR000157 GO:0007165
Arst8g02488 1146 Pfam TIR domain 307 477 IPR000157 GO:0007165
Arst8g02488 1146 Pfam TIR domain 115 285 IPR000157 GO:0007165
Arst8g02488 1146 ProSiteProfiles TIR domain profile. 306 471 IPR000157 GO:0007165
Arst8g02488 1146 SMART till_3 115 255 IPR000157 GO:0007165
Arst8g02488 1146 SMART till_3 307 446 IPR000157 GO:0007165
Arst8g02488 1146 Pfam NB-ARC domain 479 714 IPR002182 GO:0043531
Arst8g02488 1146 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 308 971 IPR044974 GO:0006952
Arst8g02488 1146 FunFam Disease resistance protein (TIR-NBS-LRR class) 112 281 - -
Arst8g02488 1146 Gene3D - 1032 1107 - -
Arst8g02488 1146 ProSiteProfiles Heavy-metal-associated domain profile. 1035 1098 IPR006121 GO:0046872
Arst8g02488 1146 MobiDBLite consensus disorder prediction 1106 1130 - -
Arst8g02488 1146 SUPERFAMILY L domain-like 771 1027 - -
Arst8g02488 1146 Gene3D Ribonuclease Inhibitor 755 1031 IPR032675 -
Arst8g02488 1146 Gene3D - 475 620 IPR027417 -
Arst8g02488 1146 Coils Coil 1104 1133 - -
Arst8g02488 1146 SUPERFAMILY Toll/Interleukin receptor TIR domain 111 257 IPR035897 -
Arst8g02488 1146 Gene3D - 625 716 IPR042197 -
Arst8g02488 1146 SUPERFAMILY Toll/Interleukin receptor TIR domain 307 448 IPR035897 -
Arst8g02488 1146 PRINTS Disease resistance protein signature 491 506 - -
Arst8g02488 1146 PRINTS Disease resistance protein signature 567 581 - -
Arst8g02488 1146 PRINTS Disease resistance protein signature 977 993 - -
Arst8g02488 1146 PRINTS Disease resistance protein signature 659 673 - -
Arst8g02488 1146 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 479 726 IPR027417 -
Arst8g02488 1146 Gene3D - 112 285 IPR035897 -
Arst8g02488 1146 Gene3D - 305 474 IPR035897 -
Arst8g02488 1146 SUPERFAMILY HMA, heavy metal-associated domain 1033 1095 IPR036163 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g02488 Arst-Chr8 34243911 34250915 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g02488 113 280 WRKY Transcription Factor Family AT4G12020 27.326 1.43e-07 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g02488 - - adu:107462276 2227.98