Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g02480 ATGCAATTAGAGATTCACGCCTTGCTATCGTTGTCTTCTCTAGGCTCTAGCACATACCCGACCTCAACGTGGTGTCTCGATGAAATGTCCGCTATAGCTGATCTCCATCGACAAAAGAAACAAATTGTTGTCCCAGTTTTCTGCGGCATTACTTCTTCTGATGTTGGAAGACGAGGAGGCCCATACGATGTCCACTTCAATTCAGAGCAATACAGCAAAATTCCCAATAGGGTTGACCGATGGAAGTTTGATGCCAAATATTTAGCCAAAGTGTATGGTTTCCCTATAAACCCTGAGAGACCAGAGACTAAACAGCTGGAAGAGATTATTGCTTTTGTTACAAAGGAATTGAATCATAAATTCACAATAGACATCAGTGATCTGATTGGGATACAGCCCCGTGTGGCAGATCTAGAAAGACGACTCAAGTTGACATCAGAGGATGTTCCCTTTCAAATTCTCGAAATTTTGGGCATGAGCGGGATAGGAAAGACAGTTCTTGCTAAGATCTTGTTCGACAGAATCTCTTATCAATTTGATGCTTGCTGTTTTATTCAGGACGTCAACCACATTCATAAAACGCATGGCAGAGGGGCTACTACTAAGATTCAAAAACAGATTATTCATCAGCTTTTCCAGGAAGAAGATCTACAATTTCTAAGTTCTCCTGAAATAGTCAAGATGCTACAAGATAGGTTATGTAACCCAAATCTCCCCAAAAGGGCTCTTATAGTTCTTGACGATGTGGATGATCCAAACCAATGGCATGAATTGCGAATATTGCCTAACTTTCTTGGTGCAGGAAGCAGAGTTGTCATAACTACTAGATTTGAGCATATTCTTAATGTGAATACTACAGCATATGAAATTTACGAGGCTCCACTGTTGAATGATGATGATGCACTGAAACTCTTTCTAACAAAAGTCTCCAAGAGTGACTATCCTAGCACTACTGTCAGCGGTGTATCTCATAAGATAATAGAATATGCTCAACGCCTTCCTTCAGCAATTGAAAACCTGGCTTCCTCCTTCCATCCAATGGGTGAAGAGCTCTGGGAAAGAGAATTGGTGAAATGGAGAAAATATCCGAATGAAAAGTTTATGAAGTCTCTTCAGGAAACAAGTTATGACGAACTGAATAGAGATGAGAAGGTGATATTTCTAGATATAGCCTGTTTCTTTGGGGGAAAAAGGAAGAAATATGTGGAGCACATTTTGGGGACTAAAATGTCAGATCCCTACCTTGCGATTCAAGAGATTCGGAGGAAATCACTCATAACAATTAGGAACCATGAAATTCATATGCATCAAATGTTACGAGAATTGGGAAAGAACATTGTTCGGGACAAATATCCAGAAGAGCCAAAATATTGGTCTAGATTGTGGGATGTTGAGGATTTCCAAAAAGTCTTGATGTCCGATATGAAAGCAAACAAAGTTCAAACCATAGTTTTGGATGATGATGTCTCCAAACACGAGGACATGAAGATTGAAGGATTATCAAATATGAGGGATCTTAGACTGCTTATATTACATCATAAGAGCTCCTCAGAAAACCTCACTTTTCGTTTCAATGAGCTATACTATCTTTTATGGCATGGTTACTCTTTCACTTCTCTCTCACTATCCATATGGTATAATCTTGTTGAATTAAATCTAATTAATAGCAGAATCCAACAACTATGGGAAGGCAGCCAGCCAATTCTTTCTTGGCAGGCAATTCCAAATCTAAAAATGGTGGATTTGAGCAACTCGAAAAATCTTAAAGAGATGCCAAGTTTTGAAGGTTGCCGAGGACTTGTGAGACTAGATCTTTCAGGATGCACAAACCTAACGAAAGTGCATGAATCAATTGGGCTTCTTAAAGAACTTGATTGTTTGAGTTTGCAAGACTGTACCAGTCTAGCCCTTCTTGATTTTGGCACTAATTGTCAGTTACGTTCTCTGAGAACTCTACTTCTCTCTGGCTGCACCAAGCTCGAGCACACGCCAGATTTGTCTGGGCTTTCAAATCTTAGGTACCTGGATCTTGAGCGATGTACAAATTTGTCCACAGTTCATAGGTCTATTGGGGAGCACGCAACACTCAAGTACTTGAGTCTGAGAGGCTGCATAAATCTTGTTCATCCACCTGACATTGTCAATGGCAACTCATCCCTCCTAATTCTAGATTTGAGCGGTTGCATGAGGATAACCAACCTTCTCTGCCGCAGACGAAAATTTGCACCTTCCTCCTGCCTGGAATCTTTGATATTTCTGAGTTCTGACTTCCTTGAGCCAACAAGAACTCTTGATTTTGTTGCAAAGATGAGGTGTTTAGAAAGACCAAACCCGAAGAAACAGGGTTTCGGTTCTGTATTTGACAGGGACTGGCTTTGTTCTAAGCTGACATATTTAAACCTGGCATACTGTCATGAGCTTAGAAGATTTCCTGAGCTATCATTTCATGGCCTTCATGAGATGAAAGGAACTTTAGAACGGTATCCACAACTCTCCATCATAGGTCAGGATTATATATTTTCAGCTTCTACTGTATGA 2538 0.4027 MQLEIHALLSLSSLGSSTYPTSTWCLDEMSAIADLHRQKKQIVVPVFCGITSSDVGRRGGPYDVHFNSEQYSKIPNRVDRWKFDAKYLAKVYGFPINPERPETKQLEEIIAFVTKELNHKFTIDISDLIGIQPRVADLERRLKLTSEDVPFQILEILGMSGIGKTVLAKILFDRISYQFDACCFIQDVNHIHKTHGRGATTKIQKQIIHQLFQEEDLQFLSSPEIVKMLQDRLCNPNLPKRALIVLDDVDDPNQWHELRILPNFLGAGSRVVITTRFEHILNVNTTAYEIYEAPLLNDDDALKLFLTKVSKSDYPSTTVSGVSHKIIEYAQRLPSAIENLASSFHPMGEELWERELVKWRKYPNEKFMKSLQETSYDELNRDEKVIFLDIACFFGGKRKKYVEHILGTKMSDPYLAIQEIRRKSLITIRNHEIHMHQMLRELGKNIVRDKYPEEPKYWSRLWDVEDFQKVLMSDMKANKVQTIVLDDDVSKHEDMKIEGLSNMRDLRLLILHHKSSSENLTFRFNELYYLLWHGYSFTSLSLSIWYNLVELNLINSRIQQLWEGSQPILSWQAIPNLKMVDLSNSKNLKEMPSFEGCRGLVRLDLSGCTNLTKVHESIGLLKELDCLSLQDCTSLALLDFGTNCQLRSLRTLLLSGCTKLEHTPDLSGLSNLRYLDLERCTNLSTVHRSIGEHATLKYLSLRGCINLVHPPDIVNGNSSLLILDLSGCMRITNLLCRRRKFAPSSCLESLIFLSSDFLEPTRTLDFVAKMRCLERPNPKKQGFGSVFDRDWLCSKLTYLNLAYCHELRRFPELSFHGLHEMKGTLERYPQLSIIGQDYIFSASTV 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g02480 845 Gene3D - 296 385 IPR042197 -
Arst8g02480 845 Gene3D - 120 291 IPR027417 -
Arst8g02480 845 Pfam NB-ARC domain 144 344 IPR002182 GO:0043531
Arst8g02480 845 SUPERFAMILY Toll/Interleukin receptor TIR domain 16 83 IPR035897 -
Arst8g02480 845 Gene3D - 13 119 IPR035897 -
Arst8g02480 845 Pfam TIR domain 16 118 IPR000157 GO:0007165
Arst8g02480 845 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 648 814 IPR044974 GO:0006952
Arst8g02480 845 SUPERFAMILY L domain-like 484 819 - -
Arst8g02480 845 Gene3D Ribonuclease Inhibitor 641 832 IPR032675 -
Arst8g02480 845 Gene3D Ribonuclease Inhibitor 494 640 IPR032675 -
Arst8g02480 845 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 116 390 IPR027417 -
Arst8g02480 845 SUPERFAMILY "Winged helix" DNA-binding domain 373 471 IPR036390 -
Arst8g02480 845 ProSiteProfiles TIR domain profile. 1 117 IPR000157 GO:0007165
Arst8g02480 845 PRINTS Disease resistance protein signature 667 683 - -
Arst8g02480 845 PRINTS Disease resistance protein signature 236 250 - -
Arst8g02480 845 PRINTS Disease resistance protein signature 153 168 - -
Arst8g02480 845 PRINTS Disease resistance protein signature 330 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g02480 Arst-Chr8 34156677 34161689 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g02480 129 734 WRKY Transcription Factor Family AT5G45050 29.359 7.77e-54 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g02480 - - adu:107462448 1700.64