Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g02472 ATGGAGCCAGGCGAGACGCCATCAGTTTCTACTAATGCTAGTTGGTCATGGAAGGTGTGCCTTTTCATATCAGGTATAGTTTTTGGTTCATTCATATCAGGCATCTTACTCAATTTGAGACCCTTACTCGGCAGCAAGTTCCGGGCTCTGCTGGGTTACCAAGATTCAGATTCCAACAACATCAAAGATGAACCGTTGGGCGAGGAAGGCAGCAGGTTGAGCCAGGAAGATTCGGCTTCTCTTCATTCTCTGGATTCAAATGTCAGCCAAGGCAGCTCCCTGAGCCAGCAGGAAGATTCAACTTGCGATCATCCTCCTCCGGAGTCAAAGTCAACTATGACCGAGGGGAGTTCGTCTTCTCCGCGAGAAGGTATCTTAGCCTTCAAAGACGATGTGAATTTAAGCAGAGGAGAAAGCCTTTCATCACAGCTCCTGCAAGCAATTAAAGATTCACGGATTTCTATCGTTGTGTTCTCAAGAGGTTATGCTAGCTCAACTCGGTGTTTGGACGATCTGGTTGCTATAGTTGATTGTCACAAAGAGATGAAGCAGGAACTTCTCCCAGTTTTCTATGATGTAGATCCACGCGATGTTCGATATCAAAGTGGGGCATACGAGGATGCGTTTGATTTACATAGGGAGAAATTCAAAGAAGAGCCTGACAAGATCTACAAATGGAAGAGTGCTATGACGTATTTGGCCAATTTAAGTGGTTTTGCTTTAAGAGATCCCGCTGAAGCCGAAGGGATTGAAAGAATAGTTGAGGCTGTGCGGGACACACTGGTTTATAAATTCCAAAGTTCAAGATCTACTCATAAAAATCCAGAATCCACTGAAAGAAGACCATCATTGCAGGAATTCAACAAATATGACGTGTTTCTCAGTCTCAGACGCACTCACACTCCCTACACATTTATTGACTACCTTTACCATTATCTTACCAAGAAAGGATTTTCCACCTTCACGAGTGAAGAGGAGACTGAGAGAGGAGACTCCATTCCTTCACAGGACCTCCAAGTAATTAAAGATTCCAGGATTCTTATAGTTGTCTTCACAAGAGATTATGCTGACTCAACTTGCTCTTTGGAGGAAATGGCTACCATAGTTGACTGTCACCGGGAACTAAATCAAACTGTCATCCCAGTTTTCTGTGGTGTGGATCGTAGGGATGTTCAAAGACAAACCGGCCCTTATGAGAAAGCGTTTGTTTCATATACGAAGGAATTCAAACAAGATCCCCTTAAGGTTCAAAAGTGGAGGGAAGCTTTGAAGTACATGACTAATCTACAAGATATAAGTCTAAAAGATTGGTCAGAGATTGAAGCGATTGGAAATATCATTCAGATAGTGGAACGATTATGCCCTAAATTCTCAAGGCTTAGTAGCCACAGTCCAGTTGGTATACAATCCAGTTTAGCCATGCTAGAAAAGCTTTTGAAATTAGAGGATGATTGTGTTTTAGTTCTCGGAGTTTGGGGCATGGGTGGATCTGGAAAGACAACCCATGCTTTAGCTTTGTATGACAGAATCGTTCAGGAATTTGAGGGTGCTTGTTTTATTGAGGACGTAAGCCAGGTTTACAGATTTGGTGGTGCTACTGCTTTGCAGAAACAAGTCCTCTGTCAATTTTTAAACGAAGAACTTTCAGATATGTACAGTCCTTTTGAAATGTCTGGCTTCTTAAGAAGAAGGCTTTATGGGAAAAAGATCCTTATAGTCCTTGAGAATGTTGATGTGCCAAGGCAGTTGGAGTCATTGGCTATAAATCGTAACATGCTTGGGAACGGAAGTAGGATTATCATAACCACCAGGGATAGACATATTTTGACTGCATATGGAGTAGATGAAATTTACGAGATTCCATTATTGAATGAAGATGAAGCTCGTGAACTGTTCCTGAGTGCTTGTCCCGATGTTACCAATGATGAGGGCTATACTGAGTTGATTCCCAGAGTACTAGAATATGCTGGTGGTCTTCCGTTGGCAATCAGAGTACTAGCTTCTTTTTTGCGATACCGTAATGTAACCTTCTGGGAAGATACCTTGAATAGATCGAGAAGAGTGCCATCTTTTGAAATTATAAAGATTCTTCAAATAAGTTTCAATGGATTAGACCAAGAAGAGAAAGAAATCTTTTTGCACATTGCTTGTTTCTTTCATGGGAAGAAGCTAGATTTTGTAAAGGAAGTTCTAAATTGTTGTGGATATTTTGCTGGAATTGGGATTCACGCTTTGATAGACAAATCACTCATAAAAAATGAGGAAGAGGAAATTCATATGCATGATCTATTGCAAGAAATGGGAAAGGAAATTGTCCGTCAAGAATGTCTTGGAAATCCAGCATCGTGGAGTAGATTGTGGCGTTACGAGGACTTTAGCTTTACCTTGAAGTCAAAGAATGAAGCAAGCGAAGTTAAAGCCATAGTTCTATGTGAGGATATCTCCATCTCCAAACATGAAGATCTGAACATCGAAGGGTTGTCAAAAATGACAAATCTTAAAATGCTCATATTATTTCATGAGCATTTCTCAGGAAAGCTTACTTCTCTTCCCAACAAATTACGGTATCTTTTGTGGGATGGATATCCTTTCTCTTCTTTGCCTTCATTTGAACCGTACAACAGTCTTGTTCAGTTGAATTTGCCTAACAGCCGCATCAAAAGGCTTTGGCATGGCCGCCAGATCTTCCCAAGTTTGGAAAGGGTGGATTTGAGTTACTCAAAAGAGCTCATGGAGACGCCAAATTTTGAAGGGAGCCCAAGTCTTAAGCGGCTAGATTTCACAGGATGCACAAATCTAGTGCGAGTGGATTCATCTATTGGACTTCTTAAAGAACTTGCTTACTTGAGTTTCCGTAACTGTTGTAGATTGGTCATCCTCGATCTTGATGTTGGATGTAACTACGATTGCAAAAAACCGGAAACCAAGCCAGATTTTACAGGAGTAGGACTACCGAATCTTGAGCACCTTGATCTCGGAGAATGTACAAGTTTATCCACTGTTCATTATTCTATTGGGACTCTTAAGCTTAAGTTCTTAAATTTGCAAGGCTGCATAAATCTTGTTGAAAAACCTGATTTCAGTGTGTTTCTAAGAGATGAGCCAGAGAATGAAGTGATTGACCATAGTCAAGTTGGGATACGATCCAATTTAGCCGTGCAAGAAAATCCAGGATCGTCTCAAAGATTGAGCCAGGAATATTCAGCTTCCGATCATGCTCCTCAGAAGTCAAAGTCAATTATGACCGAGGGGAGTTCGTCTTCTCCACGGGCTTATAAATATAATGTGCATCTGAGTTTCAGAGGTGATGATACATGCAAACATTTTGCTCGTCATCTTTCCTATCGCCTCACGGAAGAAGGTATTTTGGCCTTCAAAGACGATGTGCATTTAGACAGAGGAGAAAGCATTTCATCAGAACCCCTGCAAGCAATTAAAGATTCACGGATTTCTATCGTTGTGTTCTCAAAAGGTTATGCTAGCTCAACTTCGTGTTTGGACGAACTGGTTGCTATAGTTGATTGTCACAAAGAGGAGAAACAAGAACTTCTCCCAATTTTCTATGATGTGGATCCATATGATGTTCGAAATCAAAGTGGGCCATACGAGGATGCCTTTGATTCGAATAGGGAGAGATTCAAAGAAGAGCCTGACAAGATCTACAAATGGGAGAGTGCTATGATGTATTTGTCCAATATTAGTAGTTTGATTTTAAGAGATCGGGCAGAAACAGAAGCCGAAGGGATTGAAAGAATAGTTGAGGCGGTGTGGGACACGCTGGTTTATAAATTCCAAATTTCAAGGTCTACTGATGAAAATCCAGGATCCTCTCAAAGATTGCAGGAATTCTACAAATATGACGTGTTTCTCAGTCTCACACGCACCCGCACTCCCTACACTTTTATTGACAAACTTTGCCAGTATCTCACCGAGGAAGGATTTTCCACCTTCAAGAGTGACGTGGGGTCTGAGAGAGGCGAATCCATTTTCTCAGAGTCACTGCTCCGGCAAGCAATTAAAAATTCGCGGATTCTTGTCGTTGTCTTCACCAGTGACTATGCTGACTCCACAATCTGTTTGGAGGAACTGGCTACTATAGTTGATTGTCACCGGGATCTAAATCAAACTGTCATCCCAGTTTTCTGTGATGTGCATCCTAGGGATGTTCGAAGACAAACCGGCCCTTATGAGAAAGCGTTTGGTTCATATACAAAGGAATTCAAACAAGATCCCCATAAGGTTCAAAAGTGGAGGGAAGCTTTGAAGTACATGACTAATCTACAACGTGTGAGTCTAAAAGATGGGCCAGAGATTGAAGCGATTGGAAATATCATTCAGACAGTGGAACGATTATGCCCTAAATTCTCGAGGCTTAGTAGCGACAGTCCAGTTGGTATACAATCCAGTTTAGCCGTGCTAGAAAAGCTTTTGAAATTAGAGGATGATTGTGTTTTAGTGCTCGGAGTTTGGGGCATGGGTGGATCTGGAAAGACAACCCATGCTTTAGCTTTGTATGACAGAATCGTTCAGGAATTTGAGGGTGCTTGTTTTATTGAGGGCGTAAGCCACGTTTACAAAGTTGGTGGTGCTACTGCTTTGCAGAAACAAATCCTCTGTCAAGTTTTTAACGAAGAACTTTCAGACATGTACAGTCCTTTTGAAATGTCTGGCTTCTTAAGAAGAAGGCTTTATGGGAAAAAGATCCTTATAGTCCTTGACAATGTTGATGTGCCAAGGCAGTTGGAGTTATTGGCTATAAATCGTAACATGCTTGGGAACGGAAGTAGGATTATTATAACCACCAGGGATAGACAGATTTTGACTGCATACGGAGCAGATGCAATTTACGAGATTGACCTATTGAATGATGATGAAGCTTGTGAACTGTTCCTGAGTGCTTGTTCTGATGTTACCGATTATGAGGGCTATACTGAGTTGATTCCCAGAGTACTGAACTATGCTGATGGTCATCCGTTGGCAATCAGAGTACTAGCTTCTTTTTTGCGATCCCGTAGTGTAACCGTCTGGGAAGATACCTTGAATAGATTGAGAAGAGTGCCATATTTTCAAATTATAAAGATTCTTCAAATAAGTTTTGATGGATTACACCAAGAAGAGAAAGAAATCTTTTTGCACATTGCTTGTTTCTTTCATGGGAAGAAGCTAGATTTTGTAATCGAAGTTCTAAATTGTTGTGGATTTTTCGCTGGATTTGGGATTCAAGTTTTGATGCATAAATCACTCATTATGAAAAATGAGGTGGAGGAAATTCGTGTGCATGATTTATTGCAAGAAATGGGAAAGAATATTGTTCGTGAAGAATGTCTAGAAAATCCAGCATCGCGGAGTAGATTGTGGCGTTACGAGGACTTTAGCTTTACCTTGAAGTCAACGAATGAAGCAAGCAAAGTTAAAGCCATAGTTCTATATGAGGATACCTCCATCTCCAAACATGAAGATCTGAACATCGAAGGATTGTCAAAAATGACAAATCTTGAACTGCTCATATTATATAATCAGCATTTTTCGGGAAAGCTTACTTCTCTTCCCAACAAATTACGGTATCTTTTGTGGGACGGATATCCTTTCTCTTCTTTGCCTTCATTTGAACCATATAACCGTCTTGTTCAATTGAATTTGCCTAACAGCCGCATCAAACGGCTATGGAATGGCAGTCAGGTATTTCGAAGTTTGGAAAGGGTGGATTTGAGTTACTCAAAATTCCTCAGGGAGACACCAAATTTTGAAGGGAGCCCAAGACTTAAGCGTCTAGATTTCACAGGATGCAGAGAGCTAATGGAAGTCCATCCATCTATCGGACATCTTAAAGAACTTGCTTACCTGAGTTTCCGTGACTGTTATATGTTGGTCACCCTCAATCTTGATCATAAATGCAAATTAAGTTCTTTGAAGGTTCTTGACCTCTATAGTTGCAGACATCTTAAGAAAACACCAGATTTTACAGGAATACCCAATCTTGAGCACATTGATCTTGGAAAATGTGAAGGTTTATCCACTGTTCATCATTCTATTGGGAATCTTGAAAAGCTTAAGTTCTTAAATGTGCCAGCCGACATAGATCTTCCTGAGTTAGGTGGTGTCAGAATTATTCGAACTCCATAA 6123 0.4081 MEPGETPSVSTNASWSWKVCLFISGIVFGSFISGILLNLRPLLGSKFRALLGYQDSDSNNIKDEPLGEEGSRLSQEDSASLHSLDSNVSQGSSLSQQEDSTCDHPPPESKSTMTEGSSSSPREGILAFKDDVNLSRGESLSSQLLQAIKDSRISIVVFSRGYASSTRCLDDLVAIVDCHKEMKQELLPVFYDVDPRDVRYQSGAYEDAFDLHREKFKEEPDKIYKWKSAMTYLANLSGFALRDPAEAEGIERIVEAVRDTLVYKFQSSRSTHKNPESTERRPSLQEFNKYDVFLSLRRTHTPYTFIDYLYHYLTKKGFSTFTSEEETERGDSIPSQDLQVIKDSRILIVVFTRDYADSTCSLEEMATIVDCHRELNQTVIPVFCGVDRRDVQRQTGPYEKAFVSYTKEFKQDPLKVQKWREALKYMTNLQDISLKDWSEIEAIGNIIQIVERLCPKFSRLSSHSPVGIQSSLAMLEKLLKLEDDCVLVLGVWGMGGSGKTTHALALYDRIVQEFEGACFIEDVSQVYRFGGATALQKQVLCQFLNEELSDMYSPFEMSGFLRRRLYGKKILIVLENVDVPRQLESLAINRNMLGNGSRIIITTRDRHILTAYGVDEIYEIPLLNEDEARELFLSACPDVTNDEGYTELIPRVLEYAGGLPLAIRVLASFLRYRNVTFWEDTLNRSRRVPSFEIIKILQISFNGLDQEEKEIFLHIACFFHGKKLDFVKEVLNCCGYFAGIGIHALIDKSLIKNEEEEIHMHDLLQEMGKEIVRQECLGNPASWSRLWRYEDFSFTLKSKNEASEVKAIVLCEDISISKHEDLNIEGLSKMTNLKMLILFHEHFSGKLTSLPNKLRYLLWDGYPFSSLPSFEPYNSLVQLNLPNSRIKRLWHGRQIFPSLERVDLSYSKELMETPNFEGSPSLKRLDFTGCTNLVRVDSSIGLLKELAYLSFRNCCRLVILDLDVGCNYDCKKPETKPDFTGVGLPNLEHLDLGECTSLSTVHYSIGTLKLKFLNLQGCINLVEKPDFSVFLRDEPENEVIDHSQVGIRSNLAVQENPGSSQRLSQEYSASDHAPQKSKSIMTEGSSSSPRAYKYNVHLSFRGDDTCKHFARHLSYRLTEEGILAFKDDVHLDRGESISSEPLQAIKDSRISIVVFSKGYASSTSCLDELVAIVDCHKEEKQELLPIFYDVDPYDVRNQSGPYEDAFDSNRERFKEEPDKIYKWESAMMYLSNISSLILRDRAETEAEGIERIVEAVWDTLVYKFQISRSTDENPGSSQRLQEFYKYDVFLSLTRTRTPYTFIDKLCQYLTEEGFSTFKSDVGSERGESIFSESLLRQAIKNSRILVVVFTSDYADSTICLEELATIVDCHRDLNQTVIPVFCDVHPRDVRRQTGPYEKAFGSYTKEFKQDPHKVQKWREALKYMTNLQRVSLKDGPEIEAIGNIIQTVERLCPKFSRLSSDSPVGIQSSLAVLEKLLKLEDDCVLVLGVWGMGGSGKTTHALALYDRIVQEFEGACFIEGVSHVYKVGGATALQKQILCQVFNEELSDMYSPFEMSGFLRRRLYGKKILIVLDNVDVPRQLELLAINRNMLGNGSRIIITTRDRQILTAYGADAIYEIDLLNDDEACELFLSACSDVTDYEGYTELIPRVLNYADGHPLAIRVLASFLRSRSVTVWEDTLNRLRRVPYFQIIKILQISFDGLHQEEKEIFLHIACFFHGKKLDFVIEVLNCCGFFAGFGIQVLMHKSLIMKNEVEEIRVHDLLQEMGKNIVREECLENPASRSRLWRYEDFSFTLKSTNEASKVKAIVLYEDTSISKHEDLNIEGLSKMTNLELLILYNQHFSGKLTSLPNKLRYLLWDGYPFSSLPSFEPYNRLVQLNLPNSRIKRLWNGSQVFRSLERVDLSYSKFLRETPNFEGSPRLKRLDFTGCRELMEVHPSIGHLKELAYLSFRDCYMLVTLNLDHKCKLSSLKVLDLYSCRHLKKTPDFTGIPNLEHIDLGKCEGLSTVHHSIGNLEKLKFLNVPADIDLPELGGVRIIRTP 2040
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g02472 2040 Gene3D Ribonuclease Inhibitor 1787 2031 IPR032675 -
Arst8g02472 2040 MobiDBLite consensus disorder prediction 73 121 - -
Arst8g02472 2040 Gene3D Ribonuclease Inhibitor 801 1051 IPR032675 -
Arst8g02472 2040 SUPERFAMILY Toll/Interleukin receptor TIR domain 1278 1427 IPR035897 -
Arst8g02472 2040 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 130 261 IPR044974 GO:0006952
Arst8g02472 2040 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 130 261 IPR044974 GO:0006952
Arst8g02472 2040 MobiDBLite consensus disorder prediction 1055 1088 - -
Arst8g02472 2040 Pfam TIR domain 1093 1266 IPR000157 GO:0007165
Arst8g02472 2040 Pfam TIR domain 289 430 IPR000157 GO:0007165
Arst8g02472 2040 Pfam TIR domain 122 271 IPR000157 GO:0007165
Arst8g02472 2040 Pfam TIR domain 1285 1428 IPR000157 GO:0007165
Arst8g02472 2040 Gene3D - 112 267 IPR035897 -
Arst8g02472 2040 Gene3D - 1283 1456 IPR035897 -
Arst8g02472 2040 Gene3D - 287 457 IPR035897 -
Arst8g02472 2040 Gene3D - 1091 1265 IPR035897 -
Arst8g02472 2040 ProSiteProfiles TIR domain profile. 288 423 IPR000157 GO:0007165
Arst8g02472 2040 Pfam NB-ARC domain 474 675 IPR002182 GO:0043531
Arst8g02472 2040 Pfam NB-ARC domain 1471 1685 IPR002182 GO:0043531
Arst8g02472 2040 SUPERFAMILY Toll/Interleukin receptor TIR domain 123 239 IPR035897 -
Arst8g02472 2040 MobiDBLite consensus disorder prediction 58 123 - -
Arst8g02472 2040 SUPERFAMILY L domain-like 1758 2022 - -
Arst8g02472 2040 SUPERFAMILY Toll/Interleukin receptor TIR domain 288 429 IPR035897 -
Arst8g02472 2040 ProSiteProfiles TIR domain profile. 93 261 IPR000157 GO:0007165
Arst8g02472 2040 Gene3D - 622 705 IPR042197 -
Arst8g02472 2040 Gene3D - 1620 1703 IPR042197 -
Arst8g02472 2040 ProSiteProfiles TIR domain profile. 1092 1260 IPR000157 GO:0007165
Arst8g02472 2040 Gene3D - 1464 1613 IPR027417 -
Arst8g02472 2040 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1451 1713 IPR027417 -
Arst8g02472 2040 ProSiteProfiles TIR domain profile. 1284 1452 IPR000157 GO:0007165
Arst8g02472 2040 SUPERFAMILY L domain-like 760 1026 - -
Arst8g02472 2040 SMART till_3 1285 1427 IPR000157 GO:0007165
Arst8g02472 2040 SMART till_3 1093 1233 IPR000157 GO:0007165
Arst8g02472 2040 SMART till_3 289 429 IPR000157 GO:0007165
Arst8g02472 2040 SMART till_3 101 236 IPR000157 GO:0007165
Arst8g02472 2040 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 452 715 IPR027417 -
Arst8g02472 2040 SUPERFAMILY Toll/Interleukin receptor TIR domain 1085 1234 IPR035897 -
Arst8g02472 2040 Gene3D - 458 617 IPR027417 -
Arst8g02472 2040 FunFam Disease resistance protein (TIR-NBS-LRR class) 1090 1262 - -
Arst8g02472 2040 PRINTS Disease resistance protein signature 1486 1501 - -
Arst8g02472 2040 PRINTS Disease resistance protein signature 1654 1668 - -
Arst8g02472 2040 PRINTS Disease resistance protein signature 1562 1576 - -
Arst8g02472 2040 PRINTS Disease resistance protein signature 1965 1981 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g02472 Arst-Chr8 34089330 34123404 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g02472 1325 2029 WRKY Transcription Factor Family AT4G12020 30.028 4.39e-73 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g02472 - - adu:107462388 4054.98