Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g02381 ATGAAGACGTTTCCTCCCTCCGACACCTTTTACTGGTACAAGAATGAAGACGTTTCCTCGTACCGAAGTGGCTTGGAGCTGTGGAACCATCATCATCATCATCACCAACCGGAACACGACCTCATACCTCAAGCAAGATCTTTACAGCTTCGCGGCTGCTCTAGGAGTGGGTCCAACCACCGTGTCCGACGATCAGTCACCCTCGAGATCGGCCTTCCTGGTGACGGCGTCGGCCGTGGGGAGCGGAGCAGCAAGTGGAGCAGGACATGCTGCAAGAGCCGTGGCTTCGATTGCCAAACCCATGTGAAGAGCACTTGGGTTCCCGCTTCCAAGCGCCGCGAGAGGCACCAACAACTCTCCTCTATCCAACAACAGCTTCTTGCTGCTGATGTTCCCAAGCGCCAAAGAGATCATGCCTGGTGGCTGGCAGCAGCAGAGGAGGAAGACGAAAGATGA 456 0.557 MKTFPPSDTFYWYKNEDVSSYRSGLELWNHHHHHHQPEHDLIPQARSLQLRGCSRSGSNHRVRRSVTLEIGLPGDGVGRGERSSKWSRTCCKSRGFDCQTHVKSTWVPASKRRERHQQLSSIQQQLLAADVPKRQRDHAWWLAAAEEEDER 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g02381 151 Pfam Domain of unknown function (DUF702) 87 132 - -
Arst8g02381 151 NCBIfam putative zinc finger domain, LRP1 type 87 112 IPR006510 -
Arst8g02381 151 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 9 137 IPR007818 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g02381 Arst-Chr8 33021478 33021997 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g02381 88 137 C2H2 Transcription Factor Family AT5G66350 76.471 1.24e-19 81.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Arst8g02381 DUF702 1.4e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g02381 - - adu:107462205 283.878