Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g02374 ATGCAAGAGGAAATAATGACTCAGTGCAACAGTAATAATGATTACCCTGAAAACAATCATAGCACCATTGTGGAGAGGAACAAAGATAGCTTAATTAGTAGAACTTGTCCATCATGTGGTCATCATATCAAATGCCAACAAGACCACCAGGGTGCTGGAATTCACGATTTACCTGGGTTACCAGCTGGAGTGAAGTTTGATCCAACAGATCAGGAAATCCTAGAACATTTGGAAGCCAAGGTGAGGTCTGATATTCACAAGCTTCACCCCTTAATTGATGAGTTTATCCCTACTCTTGAAGGCGAGAATGGAATCTGCTGCACCCATCCAGAAAAGTTGCCAGGAGTAGGCAAAGATGGGTTGATCCGTCACTTCTTTCACCGGCCATCGAAAGCATACACAACAGGAACAAGGAAAAGAAGAAAGGTTCACACTGATGCTGATGGCAGTGAAACAAGGTGGCACAAAACAGGTAAAACTAGACCAGTCTACATCAGTGGCAAGTTGAAAGGTTACAAGAAAATCCTTGTTCTTTACACCAACTACAAGAAGCAAAGGAAGCCTGAGAAAACAAACTGGGTCATGCACCAGTACCACCTTGGCAACAATGAAGAGGAGAAGGAAGGTGAGTTAGTTGTGTCTAAGGTTTTCTACCAGACACAACCTAGACAATGTGCAGGTTCACTACTCATCAAAGATTCATCATCATTCCCTGCTAAACTAAAGGATCAGGGTGGTGTTCATCATCATGAAGTGACTAATAATCATAAGAACAATGGGTTTGTGGAATACTACAATGCATCCTTTATAAGTTTTGCTCAAGGGGAACAACAACATAGGTCAAACAATCCCACATTGATTTCCCATTTTCCTGCTCATGATGGGGCTCCTTTCATTCCTTGA 903 0.4208 MQEEIMTQCNSNNDYPENNHSTIVERNKDSLISRTCPSCGHHIKCQQDHQGAGIHDLPGLPAGVKFDPTDQEILEHLEAKVRSDIHKLHPLIDEFIPTLEGENGICCTHPEKLPGVGKDGLIRHFFHRPSKAYTTGTRKRRKVHTDADGSETRWHKTGKTRPVYISGKLKGYKKILVLYTNYKKQRKPEKTNWVMHQYHLGNNEEEKEGELVVSKVFYQTQPRQCAGSLLIKDSSSFPAKLKDQGGVHHHEVTNNHKNNGFVEYYNASFISFAQGEQQHRSNNPTLISHFPAHDGAPFIP 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g02374 300 ProSiteProfiles NAC domain profile. 60 219 IPR003441 GO:0003677|GO:0006355
Arst8g02374 300 Pfam No apical meristem (NAM) protein 61 200 IPR003441 GO:0003677|GO:0006355
Arst8g02374 300 Gene3D NAC domain 69 223 IPR036093 GO:0003677|GO:0006355
Arst8g02374 300 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 15 248 IPR044799 GO:0003700
Arst8g02374 300 MobiDBLite consensus disorder prediction 139 154 - -
Arst8g02374 300 FunFam NAC domain-containing protein 73 69 223 - -
Arst8g02374 300 SUPERFAMILY NAC domain 55 219 IPR036093 GO:0003677|GO:0006355
Arst8g02374 300 MobiDBLite consensus disorder prediction 133 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g02374 Arst-Chr8 32952958 32955138 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g02374 6 229 NAC Transcription Factor Family AT4G28500 71.983 1.59e-117 338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Arst8g02374 NAM 5.1e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g02374 - - gmx:100791648 490.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g02374 8 32952958 32955138 Arst8g02374 8 32952958 32955138 ECH