Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g02337 ATGACTACCAAGGGAAAGCATACCGCTAGCAAGGAAAAGCACCCCGCTAGCAAGAAGGAGCCAAACAATAATATTGCCAAGGAGGTTCATTACAGGGGTGTAAGGAAGAGGCCATGGGGCCGTTACGCCGCTGAGATCCGCGATCCCGGAAAGAAGAGCCGCGTTTGGCTCGGAACATTCAACACAGCTAAAGAAGCCGCCATGGCCTACGACGCCGCTGCCAGGCAATTCCGCGGCGCCAAGGCCAAGACCAATTTCCCTTACGCTTCCCGCCGCGAAAACGAGAACATCTTTGCCGTCGCCGGCAGGAAATGCGACATCGTTGAGTCTTATCCGATTGATTCTGCGCCTGAGCGTGACGTGACACTGCGGACAGAAGTAGATCGATTTTTCCCGTTTGTTCCATACTGTGGTGGTGAAGCGGTGCGTCCCGTTTTTCTGCCTGAACCGGTTGGTAGAGTTGAGTTCGTTGGCGAACAGAGTTGTTGTCCTTTCCGGTTGGAGCCGGCAAAGATGAGTGAGTTTAATGCACAGTCTGGGAGTGGAGCCCAGAGTAACTTGGATTCAACATCAGCCGTCGATTGCAAACCAAATGGAGTTCTTAATCTTGATCTGAAGCTCGCTCTACCCATTGGCCATTGA 642 0.528 MTTKGKHTASKEKHPASKKEPNNNIAKEVHYRGVRKRPWGRYAAEIRDPGKKSRVWLGTFNTAKEAAMAYDAAARQFRGAKAKTNFPYASRRENENIFAVAGRKCDIVESYPIDSAPERDVTLRTEVDRFFPFVPYCGGEAVRPVFLPEPVGRVEFVGEQSCCPFRLEPAKMSEFNAQSGSGAQSNLDSTSAVDCKPNGVLNLDLKLALPIGH 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g02337 213 FunFam Ethylene-responsive transcription factor 2 29 88 - -
Arst8g02337 213 ProSiteProfiles AP2/ERF domain profile. 30 87 IPR001471 GO:0003700|GO:0006355
Arst8g02337 213 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 14 108 - -
Arst8g02337 213 CDD AP2 30 89 IPR001471 GO:0003700|GO:0006355
Arst8g02337 213 SMART rav1_2 30 93 IPR001471 GO:0003700|GO:0006355
Arst8g02337 213 Pfam AP2 domain 30 79 IPR001471 GO:0003700|GO:0006355
Arst8g02337 213 PRINTS Ethylene responsive element binding protein signature 31 42 IPR001471 GO:0003700|GO:0006355
Arst8g02337 213 PRINTS Ethylene responsive element binding protein signature 53 69 IPR001471 GO:0003700|GO:0006355
Arst8g02337 213 SUPERFAMILY DNA-binding domain 30 88 IPR016177 GO:0003677
Arst8g02337 213 Gene3D AP2/ERF domain 29 89 IPR036955 GO:0003700|GO:0006355
Arst8g02337 213 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g02337 Arst-Chr8 32736272 32737115 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g02337 23 211 AP2-EREBP Transcription Factor Family AT5G44210 42.132 1.22e-37 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Arst8g02337 AP2 7.2e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g02337 K09286 - qsu:112001675 154.836