Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g02328 ATGCCTGCACAGAAGCGCCCTTACCCTGACACTCTCGACGACGCCGACGACTCCTCTAACCACCTCTTCCCGCATCGCCACCCCAAGCACCACCGCGACCGCACCCTCAAGCCCCACCATCCAGATGAAGATGCTGCTGGAGCCCACAAGGAAGAGGACGAGCAAGAACAAGAGCAAGGGGATGCTGAGCAAGAAGATGAGGAAGATGAGCAACAAGGAGCAGAAGAAGAAGATGATGATGATGAAGAAGAAGAAGAAGAGGACGATGACGAAGATGAAGATGAAGGTGAGGGAGATGAAGAAGATGAAGAAGAAGGGAAACACAACGACGAGGATTCTGACGACACCCCATCTTCGGATTCTGAAGAAAAACCAGAATTTGTGTTTGTAGAACTTCTGGAAATTCGTAAGGATGTCCAGTGCCCAATTTGCCTTGGCATTATTAAGAAAACAAGAACTGTCATGGAATGCTTGCACCGGTTTTGCAGGGAATGCATTGACAAGTCAATGCGACTTGGGAACAATGAATGCCCTGCTTGCCGAACACATTGTGCCAGTCGCCGTTCTTTGAGAGATGATCCGAAATATGATGCTCTTATTGCTGCTTTATATCCAGATATTGAGAAGTACGAGGAAGAGGAGCTTGAATTTCGTGAAGAGGAGAAGAACCGCAATAAGCAGATTCAAGCTTCAATTGCAAAAGTTGTTCAACGGCAGTCTGAGGCACTAGTTAAGAGACGTAAAGATTCACCAAGTGTATTCGTGACAAGATCCCAGCGAAATCAACGAAATGCTTCTAGGAGACAAAATCAAGTGATTGATATTCAAGGATCTGAGGATAATGAGGAGGAAAATGACAATAACGAAAAGGACTCATCATCTGCTGATGAGCGGGGTACAGAGGCGAGGCAAAGAAGGAGAAAGAGATGGACCAGAGTTCGCACCTCTCAGCCCTCATCATCAATGGCAAGTCCTGATGGTGGATGTGCAGAAAGTGACTTGGATAACGGTAGAGAAAATCGAGGACTTTCAAGGCAGGTGTCAAAACCTCGAAAACTTACATGGGGAAGGGGTGGATTTAGAAGTCACACAAGGCATGGAAGTGGCGGTGGTAGTAGTAGCAAAACCTCTCGCAGTAGTCGAGTGTCTAAGATGGTTGATTTTCTCCGAAACTTGGATGAGAATGCTGATGAGCAGTTAGATATCCATCTCATGCTTTATTCTCTGGGCAAACGAGGCGCACCAAGTTTGGAGAAGCCACACCTTTGCTGTCGCCCAACTTTGTCTGTCAAGAACCTTTGCGAATATGTTGCTCGCCAAACACCTGTGCCTGTTGAAGAAGTTGAGATATTGGCAGTTAAAGGATGCAGTGGCACAGATTTCGACAAGTCAACTGATGAGACTTCATCCTTGAAATGTGATGAGCTAACAACTCTGGTTATAGATCCATCTAAATATGAACTAGAAATTTTGCAGGGAGATGAATCTTTAGCAGGGATTAGATCTAAATGCATATCTAAAAGGGAGCATTTGATTCTGGCATACAGGCGGAAAGGGGCACTATAG 1566 0.4579 MPAQKRPYPDTLDDADDSSNHLFPHRHPKHHRDRTLKPHHPDEDAAGAHKEEDEQEQEQGDAEQEDEEDEQQGAEEEDDDDEEEEEEDDDEDEDEGEGDEEDEEEGKHNDEDSDDTPSSDSEEKPEFVFVELLEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPKYDALIAALYPDIEKYEEEELEFREEEKNRNKQIQASIAKVVQRQSEALVKRRKDSPSVFVTRSQRNQRNASRRQNQVIDIQGSEDNEEENDNNEKDSSSADERGTEARQRRRKRWTRVRTSQPSSSMASPDGGCAESDLDNGRENRGLSRQVSKPRKLTWGRGGFRSHTRHGSGGGSSSKTSRSSRVSKMVDFLRNLDENADEQLDIHLMLYSLGKRGAPSLEKPHLCCRPTLSVKNLCEYVARQTPVPVEEVEILAVKGCSGTDFDKSTDETSSLKCDELTTLVIDPSKYELEILQGDESLAGIRSKCISKREHLILAYRRKGAL 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g02328 521 CDD RING-HC_RING1-like 138 203 - -
Arst8g02328 521 MobiDBLite consensus disorder prediction 9 23 - -
Arst8g02328 521 ProSitePatterns Zinc finger RING-type signature. 157 166 IPR017907 -
Arst8g02328 521 SMART ring_2 141 180 IPR001841 -
Arst8g02328 521 MobiDBLite consensus disorder prediction 332 346 - -
Arst8g02328 521 ProSiteProfiles Zinc finger RING-type profile. 141 181 IPR001841 -
Arst8g02328 521 PANTHER OS11G0578200 PROTEIN 61 518 IPR044592 -
Arst8g02328 521 Pfam Zinc finger, C3HC4 type (RING finger) 140 180 - -
Arst8g02328 521 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 92 211 IPR013083 -
Arst8g02328 521 MobiDBLite consensus disorder prediction 366 381 - -
Arst8g02328 521 MobiDBLite consensus disorder prediction 254 276 - -
Arst8g02328 521 MobiDBLite consensus disorder prediction 56 119 - -
Arst8g02328 521 MobiDBLite consensus disorder prediction 1 124 - -
Arst8g02328 521 MobiDBLite consensus disorder prediction 239 381 - -
Arst8g02328 521 MobiDBLite consensus disorder prediction 36 55 - -
Arst8g02328 521 SUPERFAMILY RING/U-box 128 195 - -
Arst8g02328 521 Coils Coil 48 84 - -
Arst8g02328 521 Coils Coil 207 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g02328 Arst-Chr8 32674176 32679472 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g02328 134 204 C3H Transcription Factor Family AT3G23060 35.135 4.32e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g02328 K10695 - gmx:100776547 567.385