Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g02325 ATGGACCGGGGTGGTGGTGAAGACGCGCCGCTAGAGGCGAAGAGGGAGCCTAAGCCGGATGAAGATCATAATAATAATAATAATAAGAAGAAGAAGAAAGAAGTGCCGGTGACATGGGTTAGCGGGAAGAAAGGTTCCGGTGGTGGCATGCGGTGTTGTCAAGCTGAGAAGTGCAAGGCGGATCTTGAGGAGGCAAGGCAGTACCATAGGAGGCACAGGGTGTGTGAGTACCATGCCAAGGCTCAGGTGGTTCTTGTTTCCGGCATTAGACAACGCTTCTGTCAGCAATGTAGCAGGTTCCATGAGATAGGTGAATTTGATGACACAAAAAGAAGTTGCCGGAGGCGTTTGGCCGGACACAACCAACGGCGAAGAAAGAACTGTGATTCTCAAGCAGAAGGGTCGAGGCGCAAAGGGATATGTCCTCAGTTGAAGAAGGACACTGCCTGTGGAGATGATAGGAGCAGAATTCAGATTGCAATCCAAGAGAGTGGAGCTTATAAACATTTCCAGATAAGATGA 522 0.4943 MDRGGGEDAPLEAKREPKPDEDHNNNNNKKKKKEVPVTWVSGKKGSGGGMRCCQAEKCKADLEEARQYHRRHRVCEYHAKAQVVLVSGIRQRFCQQCSRFHEIGEFDDTKRSCRRRLAGHNQRRRKNCDSQAEGSRRKGICPQLKKDTACGDDRSRIQIAIQESGAYKHFQIR 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g02325 173 Gene3D - 44 114 IPR036893 GO:0003677|GO:0005634
Arst8g02325 173 MobiDBLite consensus disorder prediction 1 38 - -
Arst8g02325 173 Pfam SBP domain 53 126 IPR004333 GO:0003677
Arst8g02325 173 SUPERFAMILY SBT domain 51 130 IPR036893 GO:0003677|GO:0005634
Arst8g02325 173 ProSiteProfiles Zinc finger SBP-type profile. 50 127 IPR004333 GO:0003677
Arst8g02325 173 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 26 129 IPR044817 GO:0003677
Arst8g02325 173 MobiDBLite consensus disorder prediction 1 41 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g02325 Arst-Chr8 32610825 32611848 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g02325 40 159 SBP-box Gene Family AT1G53160 56.000 8.20e-42 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Arst8g02325 SBP 7.1e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g02325 - - ccaj:109810441 214.157