Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g02321 ATGAGATTTGACATGGTTCCCAGTGAAAGATTCAAGCTTTGGCTAAGAATTGCACTTGGGTGGTGGATTTTTCTACTGTTTCTTCCCTCTGTGACTGGTCTCAGACCCTTACGGGAAAGAACTCGTTCTTGGGGTGATGAGTGGCTTACAAGAAAAGATGAGACTGATAGTGGTCCATTTTCACAATGGAACATAACTGGAACTTATAGAGGGAGTTGGAAGTTTTCAGATGCCGCAAATGGCTCTTCCAGATTTCCAGACATCAGAAAAACAACTGGTAATTCTGTAATTGAATTAGTTAGTACACCAACAAAGATAACTGGAGTACATTACGTTCAGGGGGTTATTATATTCCATGATGTGTTTGACAATGAATATAATGTTGGTGGTGCCCAGATCAGAGTGGAAGGTGTATATATATGGCCTTTTAGACAGCTTCGAATGGTAGCCAACAGTGGAAAAGAGGGAGAATTGAATCAGGATGGAGATTATATTCTATCCAATCCATACCATCTGCTTGGAGTTTTCTCATCTCAGGTACTGCAAGATTCTTCCCGAGATAAGATGTGGAGAAAGAAACATTCTCCAATGCATGACATGGAGAAACATTGTAATATTGAAATTGCTGCACAGCTTTCACGCTTACCATCAACCAAAAATGAAGGAGAACATGATCGATTTCACCTCGAAGGTTTGATGGAGAGTCCCTCCACGGATGATGATGGGGACTGTTTCTCACCTTTACTGTTAAATACAACTTCTGTCAACATTGAGGTGTACTATAACAAAGCAGTGAACTATACCTTGATGGTTACTTTTGTTTCTTTCTTGCAAGTTCTTCTACTGATTCGTCAAATGGAGCATAGCAGCACTCAATCTGGGGCTGCAAAGGTTTCAATATTGTTGATTGGCCAGCAGGCGATAATGGATGCTTATCTTTGCCTTTTACATCTGACTGCAGGAATACTAGTTGAATCCTTGTTTAATGCTTTTGCAACTGCTGCATTTTTCAAGTTCGTTGTCTTTTCAATATTTGAGATGAGATATCTCCTCACCATCTGGAAGGCAAATAGGCCTTTGAGTAGCGGAGAAGGTTGGGAGGCAATGAGGCGCGAACTTTCCGTCTTATATAGCCGTTTCTATGGAATCCTGTTAGGAGGCATTCTCCTCATGTACGAGTTCCATCACCATTTGAGACCTATTCTTCTTCTTATATACTCCTTTTGGATACCTCAGATAATCACCAACGTTATCCGTGACTCGCGCAAGCCGCTGCATCCTCATTATATCCTCGGGATATCTGTTACTCGCCTAGCAATCCCGCTATATGTTTTTGGTTGCCCAAACAACTTCATGCGCATACAGCCGGACAAGAGCTGGTGTGTTTCATTGGCTGCATTTATTGGACTTCAAGCTTCAGTTCTTCTTCTGCAGCATTATCTCGGCTCACGGTGGTTCATCCCTCGCCAGATACTGCCTGAGAAGTACAGCTATTATAGGAGGTTTAATCAAGATGCAAGACACGCTATGGATTGTGTTATTTGCATGACATCCATTGATCTTAATCAACGGTCTAATGATTGCATGGTGACACCTTGTGATCATTTCTTTCACTCTGGTTGTCTGCAAAGATGGATGGATATAAAGATGGAGTGCCCAACTTGCCGGCGCTCGCTACCGCCTGCATAA 1689 0.4221 MRFDMVPSERFKLWLRIALGWWIFLLFLPSVTGLRPLRERTRSWGDEWLTRKDETDSGPFSQWNITGTYRGSWKFSDAANGSSRFPDIRKTTGNSVIELVSTPTKITGVHYVQGVIIFHDVFDNEYNVGGAQIRVEGVYIWPFRQLRMVANSGKEGELNQDGDYILSNPYHLLGVFSSQVLQDSSRDKMWRKKHSPMHDMEKHCNIEIAAQLSRLPSTKNEGEHDRFHLEGLMESPSTDDDGDCFSPLLLNTTSVNIEVYYNKAVNYTLMVTFVSFLQVLLLIRQMEHSSTQSGAAKVSILLIGQQAIMDAYLCLLHLTAGILVESLFNAFATAAFFKFVVFSIFEMRYLLTIWKANRPLSSGEGWEAMRRELSVLYSRFYGILLGGILLMYEFHHHLRPILLLIYSFWIPQIITNVIRDSRKPLHPHYILGISVTRLAIPLYVFGCPNNFMRIQPDKSWCVSLAAFIGLQASVLLLQHYLGSRWFIPRQILPEKYSYYRRFNQDARHAMDCVICMTSIDLNQRSNDCMVTPCDHFFHSGCLQRWMDIKMECPTCRRSLPPA 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g02321 562 SMART ring_2 512 555 IPR001841 -
Arst8g02321 562 SUPERFAMILY RING/U-box 493 560 - -
Arst8g02321 562 Pfam Ring finger domain 511 556 IPR001841 -
Arst8g02321 562 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 498 562 IPR013083 -
Arst8g02321 562 FunFam E3 ubiquitin-protein ligase, putative 498 562 - -
Arst8g02321 562 CDD RING-H2_TUL1-like 506 561 - -
Arst8g02321 562 PANTHER RING ZINC FINGER PROTEIN 98 561 - -
Arst8g02321 562 ProSiteProfiles Zinc finger RING-type profile. 512 556 IPR001841 -
Arst8g02321 562 SMART ringv_2 511 556 IPR011016 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g02321 Arst-Chr8 32597939 32603790 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g02321 512 559 C3H Transcription Factor Family AT4G12190 39.583 4.80e-08 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g02321 K23788 - gmx:100785460 991.104