Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g02319 ATGGAATTGAGAATTGACATGGTTGCTATTGAAAGATTGGAGCTTTGGTTGTTTAAGAGGAGGAAGGGACTAGGGATTTCGTTACAGATTGCATTTGGTTGGTGGATTTTTCTACTGTTTCTTCACCCTGTGGCTGCACTGAGACCCTTGAGGGAGAGAACTCGTTCTTGGGGTGATGAGTGGCTATTTACAAGAAAAGAAGAGAGTGATATTGGTCCATTTTCACAATGGAACATTACAGGAACTTACAGAGGGACTTGGAAGTTTCTGGATACGGCAAATGGCTCTTCTAGATTTCCAGATATCAGAAAAACACGCGGTAGTTCCGTAATTGAATTAATTAGTACGCCCACAAAGATAACTGGAGTACATTATATCCAGGGGGTCATTATATACCACGATGTTTTCGACAGTGAATATGATGTTGGGGGTGCTCAAATCAAAGTAGAAGGTGTATATATTTGGCCTTTTCGACAGCTTCGGTTGGTGGCCAACAGTGGAAAAGAGGGAGACTCAAGTCAGGATGATGACTATATTTTTTCTAATCCATATCATCTGCTTGGGGTTTTCTCTTCTCAGGTGCTTCAAGATTCTTCACGAGATAAGATATGGAGAAGAAAACATTCTCCAATGCATGATATGGATAAACATTGTAATATTGAAATCGCTGCACAGATTTCACGCTTGCCATCCTCAAAAAGTGATGGCGAGCGTGATCGTTTTCACCTAGAAGGGTTAATGGAGAGTCCCTCGGTGGATGATGATGGGGACTGCTTCTCAGCTTTACTGTTAAATGCAACTTCTGTTAACATTGAGGTCTATTACAACAAAGCAGTGAACTATACCTTGATGGTTACTTTTATCTCTTTTGTGCAAGTTCTTCTATTGATTCGTCAAATGGAGCATAGCAGCACCCAGTCTGGTGCTGCTAAGGTTTCAATATTAATGATTGGCCAGCAGGCGATAATGGATGCATATCTCTGTCTTTTACACCTTACTGCAGGAATACTAGTTGAATCCTTGTTTAATGCTTTTGCAACTGCCGCATTTTTCAAGTTTGTTGTCTTTTCAATATTTGAGATGAGATATCTTCTCGCCATCTGGAAGGCTAGTAGACCTTTGAGTAATGGGGAAGGTTGGGAGACAATGAGGCGTGAACTTTCCGTGTTATACAGTCGTTTCTATGGAATCTTGTTGGGAGGCATTCTTTTGATGTATGAGTTCCATCATTATTTAAGACCAATTCTTCTTCTTATGTACTCTTTCTGGATACCTCAGATAATCACCAATGTTATTCGCGATTCACGCAAGCCATTGCATCCTCACTATATCTTAGGGATAACCATTACTCGGTTAGCAATCCCGTTATATGTTTTTGGTTGTCCTAACAATTTCATGCGCATAGAATCAGATAGGAGCTGGTGTCTTTATTTGGCTGTATTTATTGGACTTCAAGCCGCAGTTCTTCTTCTTCAGCATTATCTTGGGTCTCGATGGTTCATTCCTCGTCAGATACTACCTGAGAAATATAGCTACTATAGGAGGTTTGATCAAGATGCAAGACATGCTTCGGACTGTGTGATTTGCATGACATCCATTGATCATACTCAACGGTCTAATGACTGCATGGTGACACCTTGTGATCATTTCTTCCACTCTGGTTGTTTGCAAAGATGGATGGATATAAAGATGGAGTGCCCAACTTGCCGGCGCTCTCTACCTCCGGCATAG 1731 0.4113 MELRIDMVAIERLELWLFKRRKGLGISLQIAFGWWIFLLFLHPVAALRPLRERTRSWGDEWLFTRKEESDIGPFSQWNITGTYRGTWKFLDTANGSSRFPDIRKTRGSSVIELISTPTKITGVHYIQGVIIYHDVFDSEYDVGGAQIKVEGVYIWPFRQLRLVANSGKEGDSSQDDDYIFSNPYHLLGVFSSQVLQDSSRDKIWRRKHSPMHDMDKHCNIEIAAQISRLPSSKSDGERDRFHLEGLMESPSVDDDGDCFSALLLNATSVNIEVYYNKAVNYTLMVTFISFVQVLLLIRQMEHSSTQSGAAKVSILMIGQQAIMDAYLCLLHLTAGILVESLFNAFATAAFFKFVVFSIFEMRYLLAIWKASRPLSNGEGWETMRRELSVLYSRFYGILLGGILLMYEFHHYLRPILLLMYSFWIPQIITNVIRDSRKPLHPHYILGITITRLAIPLYVFGCPNNFMRIESDRSWCLYLAVFIGLQAAVLLLQHYLGSRWFIPRQILPEKYSYYRRFDQDARHASDCVICMTSIDHTQRSNDCMVTPCDHFFHSGCLQRWMDIKMECPTCRRSLPPA 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g02319 576 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 512 576 IPR013083 -
Arst8g02319 576 SMART ring_2 526 569 IPR001841 -
Arst8g02319 576 SUPERFAMILY RING/U-box 508 574 - -
Arst8g02319 576 PANTHER RING ZINC FINGER PROTEIN 150 575 - -
Arst8g02319 576 FunFam E3 ubiquitin-protein ligase, putative 512 576 - -
Arst8g02319 576 Pfam Ring finger domain 525 570 IPR001841 -
Arst8g02319 576 CDD RING-H2_TUL1-like 520 575 - -
Arst8g02319 576 SMART ringv_2 525 570 IPR011016 GO:0008270
Arst8g02319 576 ProSiteProfiles Zinc finger RING-type profile. 526 570 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g02319 Arst-Chr8 32570368 32578475 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g02319 526 573 C3H Transcription Factor Family AT4G12190 39.583 3.17e-08 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g02319 K23788 - gmx:100780140 1021.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g02319 8 32570368 32578475 Arst8g02319 8 32570368 32578475 ECH